Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10b15
         (623 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00036-6|AAK29853.1|  377|Caenorhabditis elegans Hypothetical pr...   209   1e-54
U00036-5|AAT92064.1|  446|Caenorhabditis elegans Hypothetical pr...   209   1e-54
U00036-7|AAK29858.2|  319|Caenorhabditis elegans Hypothetical pr...   207   4e-54
U00036-8|AAL06052.1|  318|Caenorhabditis elegans Hypothetical pr...   196   8e-51
Z68014-5|CAA92027.1|  353|Caenorhabditis elegans Hypothetical pr...   103   8e-23
U41011-7|AAA82290.1|  271|Caenorhabditis elegans Hypothetical pr...    32   0.38 
Z81015-3|CAB02656.1|  266|Caenorhabditis elegans Hypothetical pr...    29   3.6  

>U00036-6|AAK29853.1|  377|Caenorhabditis elegans Hypothetical
           protein R151.2a protein.
          Length = 377

 Score =  209 bits (511), Expect = 1e-54
 Identities = 101/126 (80%), Positives = 113/126 (89%)
 Frame = +1

Query: 244 RMPNIKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSG 423
           RMPNIKVFSGSSHPDL+ +I +RL +++ K   KKFSN ET VEIGESVRGEDVYI+QS 
Sbjct: 58  RMPNIKVFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSA 117

Query: 424 SGEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPITAKLVANILSVS 603
           +GEINDNLMELLIMINACKIAS+ RV AVIP FPYARQDKKDKSRAPI+AKLVAN+LSV+
Sbjct: 118 AGEINDNLMELLIMINACKIASSCRVAAVIPAFPYARQDKKDKSRAPISAKLVANMLSVA 177

Query: 604 GADHII 621
           GADHII
Sbjct: 178 GADHII 183


>U00036-5|AAT92064.1|  446|Caenorhabditis elegans Hypothetical
           protein R151.2d protein.
          Length = 446

 Score =  209 bits (511), Expect = 1e-54
 Identities = 101/126 (80%), Positives = 113/126 (89%)
 Frame = +1

Query: 244 RMPNIKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSG 423
           RMPNIKVFSGSSHPDL+ +I +RL +++ K   KKFSN ET VEIGESVRGEDVYI+QS 
Sbjct: 127 RMPNIKVFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSA 186

Query: 424 SGEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPITAKLVANILSVS 603
           +GEINDNLMELLIMINACKIAS+ RV AVIP FPYARQDKKDKSRAPI+AKLVAN+LSV+
Sbjct: 187 AGEINDNLMELLIMINACKIASSCRVAAVIPAFPYARQDKKDKSRAPISAKLVANMLSVA 246

Query: 604 GADHII 621
           GADHII
Sbjct: 247 GADHII 252


>U00036-7|AAK29858.2|  319|Caenorhabditis elegans Hypothetical
           protein R151.2b protein.
          Length = 319

 Score =  207 bits (506), Expect = 4e-54
 Identities = 100/125 (80%), Positives = 112/125 (89%)
 Frame = +1

Query: 247 MPNIKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGS 426
           MPNIKVFSGSSHPDL+ +I +RL +++ K   KKFSN ET VEIGESVRGEDVYI+QS +
Sbjct: 1   MPNIKVFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSAA 60

Query: 427 GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPITAKLVANILSVSG 606
           GEINDNLMELLIMINACKIAS+ RV AVIP FPYARQDKKDKSRAPI+AKLVAN+LSV+G
Sbjct: 61  GEINDNLMELLIMINACKIASSCRVAAVIPAFPYARQDKKDKSRAPISAKLVANMLSVAG 120

Query: 607 ADHII 621
           ADHII
Sbjct: 121 ADHII 125


>U00036-8|AAL06052.1|  318|Caenorhabditis elegans Hypothetical
           protein R151.2c protein.
          Length = 318

 Score =  196 bits (479), Expect = 8e-51
 Identities = 95/120 (79%), Positives = 107/120 (89%)
 Frame = +1

Query: 262 VFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGSGEIND 441
           VFSGSSHPDL+ +I +RL +++ K   KKFSN ET VEIGESVRGEDVYI+QS +GEIND
Sbjct: 5   VFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSAAGEIND 64

Query: 442 NLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPITAKLVANILSVSGADHII 621
           NLMELLIMINACKIAS+ RV AVIP FPYARQDKKDKSRAPI+AKLVAN+LSV+GADHII
Sbjct: 65  NLMELLIMINACKIASSCRVAAVIPAFPYARQDKKDKSRAPISAKLVANMLSVAGADHII 124


>Z68014-5|CAA92027.1|  353|Caenorhabditis elegans Hypothetical
           protein W04G3.5 protein.
          Length = 353

 Score =  103 bits (248), Expect = 8e-23
 Identities = 48/120 (40%), Positives = 83/120 (69%)
 Frame = +1

Query: 262 VFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGSGEIND 441
           + +G+SHP+LA+ + +RL I LG+      +N ET V+I +SVRG+ V+I+QSGS  +N+
Sbjct: 13  LLTGNSHPELAKMVSERLEIRLGEATVYNKTNRETSVDIKQSVRGKHVFILQSGSKNVNN 72

Query: 442 NLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPITAKLVANILSVSGADHII 621
           ++MELL++I ACK + +  +T ++P  PY++Q +  + R+ I  KLVA ++  +GA  ++
Sbjct: 73  DVMELLVLIYACKTSMSKTITVIMPYLPYSKQCRMLR-RSSIAMKLVAEMICKAGASRLV 131


>U41011-7|AAA82290.1|  271|Caenorhabditis elegans Hypothetical
           protein D2024.2 protein.
          Length = 271

 Score = 31.9 bits (69), Expect = 0.38
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = +1

Query: 187 TITLEDVVNKLDHVLPLTTRMPNIKVFSGSSHPDLAQKIVDRL 315
           T T+EDVVN +D +L L   + N+ V   S+   LA   V RL
Sbjct: 115 TETVEDVVNGVDFILKLYPNVSNVLVGGHSAGAHLAMNAVARL 157


>Z81015-3|CAB02656.1|  266|Caenorhabditis elegans Hypothetical
           protein C11E4.4 protein.
          Length = 266

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -2

Query: 76  GQRVRSCRAVYPAPMSFAYGNS 11
           GQ  RSC  +YP P  F  G S
Sbjct: 241 GQHSRSCTRIYPCPYGFLRGTS 262


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,178,401
Number of Sequences: 27780
Number of extensions: 246662
Number of successful extensions: 678
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)