Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10c24
(348 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110490-2|CAB54440.1| 91|Caenorhabditis elegans Hypothetical ... 146 3e-36
Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical pr... 33 0.074
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 28 1.6
AF039048-9|AAB94233.1| 362|Caenorhabditis elegans Hypothetical ... 27 4.9
AF039048-8|AAT68896.1| 367|Caenorhabditis elegans Hypothetical ... 27 4.9
AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical ... 27 4.9
Z72507-1|CAA96633.2| 172|Caenorhabditis elegans Hypothetical pr... 26 6.4
Z83221-5|CAB05706.2| 578|Caenorhabditis elegans Hypothetical pr... 26 8.5
AL032639-10|CAA21634.1| 108|Caenorhabditis elegans Hypothetical... 26 8.5
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 26 8.5
>AL110490-2|CAB54440.1| 91|Caenorhabditis elegans Hypothetical
protein Y48B6A.2 protein.
Length = 91
Score = 146 bits (355), Expect = 3e-36
Identities = 62/90 (68%), Positives = 76/90 (84%)
Frame = +3
Query: 42 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 221
MAKRTKKVGI GKYGTRYGASLRKM KK+EV QH++YTCSFCGK+AMKR GIW+C +C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMAKKLEVAQHSRYTCSFCGKEAMKRKATGIWNCAKC 60
Query: 222 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 311
+ VAGGA+V+ T A++ RS +RRLR++K
Sbjct: 61 HKVVAGGAYVYGTVTAATVRSTIRRLRDLK 90
>Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical
protein T13H5.4 protein.
Length = 500
Score = 32.7 bits (71), Expect = 0.074
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 5 FSVNFCIGEVYQNGQTYQKGWNYWQIWHTLRCLST*NGQKDGSNPTRKVYLLILW 169
+S C + Y+ + +QK +N W+ H +RCL N +N T+ L LW
Sbjct: 405 YSCEICGNQTYKGPKAFQKHFNEWRHSHGMRCLGIPN-TSHFANITKIKDALDLW 458
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 138 QHAKYTCSFCGKDAMKRSCVGIWSCKRC 221
++ KY C+ C R G+WSCK C
Sbjct: 229 ENNKYECAICYTRITTRQ--GVWSCKTC 254
>AF039048-9|AAB94233.1| 362|Caenorhabditis elegans Hypothetical
protein F16B4.2a protein.
Length = 362
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 183 KRSCVGIWSCKRCKRTVAGGAWVFSTT 263
K C+ W+C C +T+ +W F +T
Sbjct: 333 KEKCILDWTCSTCDKTIE--SWYFRST 357
>AF039048-8|AAT68896.1| 367|Caenorhabditis elegans Hypothetical
protein F16B4.2b protein.
Length = 367
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 183 KRSCVGIWSCKRCKRTVAGGAWVFSTT 263
K C+ W+C C +T+ +W F +T
Sbjct: 338 KEKCILDWTCSTCDKTIE--SWYFRST 362
>AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical
protein C15F1.5a protein.
Length = 381
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 105 LRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTVAGGAWVFST 260
L+K KKM V A S + M +C G + C+R + G A + T
Sbjct: 32 LKKSTKKMRVCPVAHCYSSLTAPEPMTSTCEG----ENCQRKIMGNAEILRT 79
>Z72507-1|CAA96633.2| 172|Caenorhabditis elegans Hypothetical
protein F17C11.1 protein.
Length = 172
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 165 CGKDAMKRSCVGIWSCKRCKRTVAGGAWVFSTTAASSCRS 284
CGK + R+C + +C W F+TTAA++ S
Sbjct: 69 CGKSPVNRNCTALVPDSKCV-----FKWAFATTAAATACS 103
>Z83221-5|CAB05706.2| 578|Caenorhabditis elegans Hypothetical
protein C49A1.9 protein.
Length = 578
Score = 25.8 bits (54), Expect = 8.5
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Frame = +3
Query: 108 RKMVKKMEVTQHAKYTCSFCGKDA----MKRSCVGIWSCKRCKRTV-AGGAWVFSTTAAS 272
R+ ++++ ++T + C K A MK S S TV + W+F+TT
Sbjct: 95 RESSTELKIAVKMEFTANTCSKTATANTMKNSVATDTSYLEYTMTVNSESQWIFTTTITL 154
Query: 273 SCRSAVRRLREVK*F 317
+C R + K F
Sbjct: 155 NCPVGYRLFKRPKGF 169
>AL032639-10|CAA21634.1| 108|Caenorhabditis elegans Hypothetical
protein Y38F1A.9 protein.
Length = 108
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 84 GTRYGASLRKMVKKMEVTQHAK 149
G RY + ++KMV K VT H K
Sbjct: 46 GDRYVSKIKKMVGKFTVTLHIK 67
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 153 TCSFCGKDAMKRSCVGIWSCKRCKRTVAGGAWVFSTTAASSC 278
TC CG++ KR C+ + C G A S A+S C
Sbjct: 1119 TCGSCGQETRKRKCLSLQYGCAC----TGNATDTSVCASSVC 1156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,799,478
Number of Sequences: 27780
Number of extensions: 163262
Number of successful extensions: 527
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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