Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10b18
(426 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical p... 29 1.1
U41625-5|AAA83327.1| 700|Caenorhabditis elegans Suppressor of a... 29 1.1
AY091467-1|AAM44123.1| 700|Caenorhabditis elegans SUR-5 protein. 29 1.1
AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical ... 29 1.4
U88173-6|AAM15575.1| 1282|Caenorhabditis elegans Hypothetical pr... 28 2.4
U88173-5|AAM15574.1| 1280|Caenorhabditis elegans Hypothetical pr... 28 2.4
U42436-9|AAF99893.1| 109|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z73977-2|CAA98291.2| 349|Caenorhabditis elegans Hypothetical pr... 26 9.8
Z73968-1|CAA98230.2| 349|Caenorhabditis elegans Hypothetical pr... 26 9.8
Z70267-1|CAA94211.1| 307|Caenorhabditis elegans Hypothetical pr... 26 9.8
U55363-12|AAA97969.1| 320|Caenorhabditis elegans Hypothetical p... 26 9.8
AF039053-16|AAC25869.1| 497|Caenorhabditis elegans Cytochrome p... 26 9.8
>U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical
protein B0222.9 protein.
Length = 1217
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 216 FGGLSMNGSWIFCMCEVYPGGVCNPSF 136
FGG N SWI CMC + + P++
Sbjct: 708 FGGKVNNASWIACMCAIVAKKLNRPTY 734
>U41625-5|AAA83327.1| 700|Caenorhabditis elegans Suppressor of
activated let-60ras protein 5 protein.
Length = 700
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +2
Query: 170 SHIQKIQEPFIDKPPKLQNTLLLTARHSTHPTVAKERSDFVACPRLAFDCYKI 328
SH+QK+Q P KPP+ T L+ R+ K+ +D+ R D Y I
Sbjct: 38 SHVQKLQ-PVYYKPPQNLETFELSLRNHFEEKTNKKFADYREFHRFTCDNYGI 89
>AY091467-1|AAM44123.1| 700|Caenorhabditis elegans SUR-5 protein.
Length = 700
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +2
Query: 170 SHIQKIQEPFIDKPPKLQNTLLLTARHSTHPTVAKERSDFVACPRLAFDCYKI 328
SH+QK+Q P KPP+ T L+ R+ K+ +D+ R D Y I
Sbjct: 38 SHVQKLQ-PVYYKPPQNLETFELSLRNHFEEKTNKKFADYREFHRFTCDNYGI 89
>AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical
protein F15E6.6 protein.
Length = 1228
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 216 FGGLSMNGSWIFCMCEVYPGGVCNPSFCV 130
FGG N SWI C+C V + P++ V
Sbjct: 740 FGGKLNNASWIACICSVVAKKLNRPTYGV 768
>U88173-6|AAM15575.1| 1282|Caenorhabditis elegans Hypothetical
protein F46F11.9b protein.
Length = 1282
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 251 STHPTVAKERSDFVACPRLAFDCYKIVSARF 343
S H +A R A P L+FDCY++ F
Sbjct: 516 SFHRVLAANRFSNAAIPALSFDCYRLALPAF 546
>U88173-5|AAM15574.1| 1280|Caenorhabditis elegans Hypothetical
protein F46F11.9a protein.
Length = 1280
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 251 STHPTVAKERSDFVACPRLAFDCYKIVSARF 343
S H +A R A P L+FDCY++ F
Sbjct: 514 SFHRVLAANRFSNAAIPALSFDCYRLALPAF 544
>U42436-9|AAF99893.1| 109|Caenorhabditis elegans Hypothetical
protein C49H3.3 protein.
Length = 109
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 166 DLAHTEDPGAVH*QAAEVTEHATINSQTFHTSDSS 270
D T+ G + + EVT ATIN++T D S
Sbjct: 43 DAEKTKTDGTANEEKMEVTSQATINTKTLKKKDGS 77
>Z73977-2|CAA98291.2| 349|Caenorhabditis elegans Hypothetical
protein C05A2.1 protein.
Length = 349
Score = 26.2 bits (55), Expect = 9.8
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = -1
Query: 411 MIKLFIYKTVIKINYLSLAGL--V*NLADTIL*QSKAKRGQATKSLRSFATV-GCVECLA 241
++ L YK N+ L G V NL + KR + K + F V C+ A
Sbjct: 109 IVLLLCYKIKYPNNFFLLRGNHEVANLNRIYGFYDECKRRYSVKLWKCFQDVFNCMPVAA 168
Query: 240 -VNSSVFCNFGGLSMN 196
+++ +FC GGLS N
Sbjct: 169 LIDNKIFCCHGGLSPN 184
>Z73968-1|CAA98230.2| 349|Caenorhabditis elegans Hypothetical
protein C05A2.1 protein.
Length = 349
Score = 26.2 bits (55), Expect = 9.8
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = -1
Query: 411 MIKLFIYKTVIKINYLSLAGL--V*NLADTIL*QSKAKRGQATKSLRSFATV-GCVECLA 241
++ L YK N+ L G V NL + KR + K + F V C+ A
Sbjct: 109 IVLLLCYKIKYPNNFFLLRGNHEVANLNRIYGFYDECKRRYSVKLWKCFQDVFNCMPVAA 168
Query: 240 -VNSSVFCNFGGLSMN 196
+++ +FC GGLS N
Sbjct: 169 LIDNKIFCCHGGLSPN 184
>Z70267-1|CAA94211.1| 307|Caenorhabditis elegans Hypothetical
protein K04C1.1 protein.
Length = 307
Score = 26.2 bits (55), Expect = 9.8
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 47 LSSPSSFFNRCHIWFDTPAPFFSRYHTQTQKL 142
L + S FF R W D PF S T TQ L
Sbjct: 234 LKNSSEFFERLVDWIDLLVPFASDALTLTQPL 265
>U55363-12|AAA97969.1| 320|Caenorhabditis elegans Hypothetical
protein ZC404.11 protein.
Length = 320
Score = 26.2 bits (55), Expect = 9.8
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
Frame = -1
Query: 237 NSSVFCNFGGLSMNGSWIFCMCEVYPGGVCN---PS-----FCVCV*YRLKNGAGVSNHM 82
+ SVF + LS+ +F ++ G C PS F + + R+K G SN +
Sbjct: 154 DGSVFLDISPLSLANDCLFLKTSIFFSGSCFKILPSILMSMFSIIILIRIKAGKQRSNSL 213
Query: 81 WHRLKNDDGDDKPCLNCVIYVAVVF 7
H + D + V VVF
Sbjct: 214 SHNQTDQDAQIDRSTRFIQVVVVVF 238
>AF039053-16|AAC25869.1| 497|Caenorhabditis elegans Cytochrome p450
family protein 33C1 protein.
Length = 497
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +2
Query: 32 QFKHGLSSPSSFFNRCHIWFDTPAPFFSR 118
+ KH + SP+ F + HI+ P F++
Sbjct: 195 ELKHIIDSPAEIFGKLHIFLAMNIPIFAK 223
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,032,958
Number of Sequences: 27780
Number of extensions: 182279
Number of successful extensions: 493
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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