Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0128
         (364 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical pr...    27   5.3  
AF016441-2|AAB65912.2|  417|Caenorhabditis elegans Hypothetical ...    26   7.0  
Z72515-5|CAH60771.2|  331|Caenorhabditis elegans Hypothetical pr...    26   9.3  

>Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical
           protein R09E10.5 protein.
          Length = 1459

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = -3

Query: 110 LKNTPFYFMQFRSFSFRYKDASCRIPAARGSTSLER 3
           + N  F F Q   F+F Y   S R P  R  T LER
Sbjct: 876 IDNDKFIFNQPGVFNFLYIPQSVRTPEVRIQTRLER 911


>AF016441-2|AAB65912.2|  417|Caenorhabditis elegans Hypothetical
           protein M03F8.5 protein.
          Length = 417

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -3

Query: 155 VPASVFLFYVINTSILKNTPFYFMQFRSFSFRYKDA 48
           + + + LFY+++ S L   P   ++FR+FS  ++ A
Sbjct: 16  ITSLICLFYIVSQSHLNFKPNLKLEFRNFSEPHRQA 51


>Z72515-5|CAH60771.2|  331|Caenorhabditis elegans Hypothetical
           protein T11A5.7 protein.
          Length = 331

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = -1

Query: 142 YSFFML*IQVFLKTHPFILCNSGAFHLGIKMPRAEFLQPGDPLV*SA 2
           Y      + VFL   P ++  S     G+ MP      PG P + +A
Sbjct: 141 YGILFASLHVFLAAAPLMIAYSNTKFDGVFMPYCNIYMPGHPEIANA 187


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,920,043
Number of Sequences: 27780
Number of extensions: 147082
Number of successful extensions: 266
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 266
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)