Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0081
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032626-27|CAA21541.1|  271|Caenorhabditis elegans Hypothetical...    97   7e-21
Z74042-14|CAE11313.1|  311|Caenorhabditis elegans Hypothetical p...    33   0.13 
AF100673-3|ABA00151.1|  950|Caenorhabditis elegans Hypothetical ...    30   1.6  
AF100673-2|AAU05553.1|  899|Caenorhabditis elegans Hypothetical ...    30   1.6  
AF100673-1|AAP13733.1|  897|Caenorhabditis elegans Hypothetical ...    30   1.6  
Z81489-2|CAB04011.2|  360|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AF039050-1|AAC47934.2|  344|Caenorhabditis elegans Seven tm rece...    29   3.8  
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha...    29   3.8  
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha...    29   3.8  
AC024799-6|AAK72315.1|  306|Caenorhabditis elegans Serpentine re...    28   5.0  
Z71185-12|CAA94906.3|  460|Caenorhabditis elegans Hypothetical p...    28   6.7  
AL021503-2|CAA16421.1|  320|Caenorhabditis elegans Hypothetical ...    28   6.7  
Z70753-3|CAA94768.1|  343|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z49911-1|CAA90131.2|  647|Caenorhabditis elegans Hypothetical pr...    27   8.8  
AF016442-4|AAB65915.1|  361|Caenorhabditis elegans Serpentine re...    27   8.8  

>AL032626-27|CAA21541.1|  271|Caenorhabditis elegans Hypothetical
           protein Y37D8A.17 protein.
          Length = 271

 Score = 97.5 bits (232), Expect = 7e-21
 Identities = 50/140 (35%), Positives = 79/140 (56%), Gaps = 2/140 (1%)
 Frame = +1

Query: 187 PPKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPLFNN-PV-SAFYKALLANAATS 360
           PP    ++  ++ AN ++  L+  RV+TV   + Y+ P     P  SA+YK   A+AAT 
Sbjct: 31  PPPAYSSISQYVSANTMECVLFAARVLTVFFALNYMIPFIGLVPAHSAYYKIFAASAATF 90

Query: 361 ALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLLILVPIFLFALLHAA 540
           ALRLH RI   + +L+  F+ R  +EDS HYL YS++F+   P  +  +P+ ++A LHA 
Sbjct: 91  ALRLHTRIQG-QFALNAQFIQRLIIEDSFHYLVYSVVFLMAAPVSMAALPVTIYAALHAC 149

Query: 541 SYSLTILDTLGQNSLWVARL 600
           ++   IL   G  S  + +L
Sbjct: 150 TFMTKILRETGHTSSIIPKL 169


>Z74042-14|CAE11313.1|  311|Caenorhabditis elegans Hypothetical
           protein T11F9.18 protein.
          Length = 311

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
 Frame = +1

Query: 307 NNPVSAFYKALLANAATSAL-RLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNV 483
           + P++A Y  L   A+   L +L   +  R ISL R+F+   +++ + H +F S+     
Sbjct: 201 SQPLAAVYFGLSVYASKLGLQKLKASLSQRTISLQRNFLHSLYIQTAVHVIFISIPLGIF 260

Query: 484 VPNLLILVPIFLFALLHAASYSLTILDTL 570
             + +I +P  +  +L A       L TL
Sbjct: 261 FLSFIIWIPSNMSYILTAMCTQHGSLSTL 289


>AF100673-3|ABA00151.1|  950|Caenorhabditis elegans Hypothetical
           protein Y66H1B.2c protein.
          Length = 950

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +3

Query: 357 FSAAATSKNSSTRDLPLAGFHGEVLPGGQRSLFILFTH 470
           F           R L LA FHG+ +P G+   F + TH
Sbjct: 628 FKVYIAPATGEVRKLELAQFHGQGIPAGKAFTFTVLTH 665


>AF100673-2|AAU05553.1|  899|Caenorhabditis elegans Hypothetical
           protein Y66H1B.2b protein.
          Length = 899

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +3

Query: 357 FSAAATSKNSSTRDLPLAGFHGEVLPGGQRSLFILFTH 470
           F           R L LA FHG+ +P G+   F + TH
Sbjct: 577 FKVYIAPATGEVRKLELAQFHGQGIPAGKAFTFTVLTH 614


>AF100673-1|AAP13733.1|  897|Caenorhabditis elegans Hypothetical
           protein Y66H1B.2a protein.
          Length = 897

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +3

Query: 357 FSAAATSKNSSTRDLPLAGFHGEVLPGGQRSLFILFTH 470
           F           R L LA FHG+ +P G+   F + TH
Sbjct: 575 FKVYIAPATGEVRKLELAQFHGQGIPAGKAFTFTVLTH 612


>Z81489-2|CAB04011.2|  360|Caenorhabditis elegans Hypothetical
           protein C55A1.3 protein.
          Length = 360

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +1

Query: 454 LFYSLIFMNVVPNLLILVPIFLFALLHAASYSLTILDTLGQNSLWVARLLISLVEF 621
           LFY+L+F  ++P +L+ +P  L  L      S+     L   S+++  +L  L  F
Sbjct: 260 LFYALVFQTLIPVILMHIPASLGFLFSMFGQSILFFGELPTFSVFLYPILDPLPNF 315


>Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical
           protein C09G5.6 protein.
          Length = 948

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +3

Query: 144 NQYGRSKSASRRHWSTKRHPSLESSHHCQ*NRRSSLGGPR 263
           + YGR  ++SRR +  ++ PS  S+ H   N R+SL  P+
Sbjct: 161 DNYGREPASSRRPYPPQQPPS-TSAPHSSPNNRTSLYNPQ 199


>Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical
           protein B0240.3 protein.
          Length = 1093

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 354 DFSAAATSKNSSTRDLPLAGFHGEV 428
           +F   +TS     +D+PL GFHGE+
Sbjct: 317 NFVLNSTSSFEPLKDVPLCGFHGEI 341


>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical
           protein K08C7.3b protein.
          Length = 3672

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +3

Query: 123 STNFNTLNQYGRSKSASRRHWSTKRHPSLESSHHC 227
           ST +  LN Y       ++ WS   +P +   H C
Sbjct: 67  STQYTPLNSYSYQDDEQQKSWSQYENPMVRGGHGC 101


>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical
           protein K08C7.3a protein.
          Length = 3704

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +3

Query: 123 STNFNTLNQYGRSKSASRRHWSTKRHPSLESSHHC 227
           ST +  LN Y       ++ WS   +P +   H C
Sbjct: 67  STQYTPLNSYSYQDDEQQKSWSQYENPMVRGGHGC 101


>AF039050-1|AAC47934.2|  344|Caenorhabditis elegans Seven tm
           receptor protein 247 protein.
          Length = 344

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 15/56 (26%), Positives = 29/56 (51%)
 Frame = +1

Query: 454 LFYSLIFMNVVPNLLILVPIFLFALLHAASYSLTILDTLGQNSLWVARLLISLVEF 621
           LFY+L+F  ++P +L+ +P     L+     S+ +   L   S+++  +L  L  F
Sbjct: 245 LFYALVFQTLIPVILMHIPASFGFLVSIFGNSIQLFGQLPTFSIFLFPMLDPLPNF 300


>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
           chain protein.
          Length = 3704

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +3

Query: 123 STNFNTLNQYGRSKSASRRHWSTKRHPSLESSHHC 227
           ST +  LN Y       ++ WS   +P +   H C
Sbjct: 67  STQYTPLNSYSYQDDEQQKSWSQYENPMVRGGHGC 101


>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
           protein.
          Length = 3704

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +3

Query: 123 STNFNTLNQYGRSKSASRRHWSTKRHPSLESSHHC 227
           ST +  LN Y       ++ WS   +P +   H C
Sbjct: 67  STQYTPLNSYSYQDDEQQKSWSQYENPMVRGGHGC 101


>AC024799-6|AAK72315.1|  306|Caenorhabditis elegans Serpentine
           receptor, class x protein5 protein.
          Length = 306

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = +1

Query: 460 YSLIFMNVVPNLLILVPIFLFALL--HAASYSLTILDTLGQ-NSLWVARLLISLVEFQSR 630
           + L F+++  NLLI +P+F FA     ++ Y +   + +     L+VA    SL     R
Sbjct: 12  FCLSFVSICLNLLIFIPVFRFAFFGKRSSIYLIAFFNIISDLQQLFVACFHSSLSIIFGR 71

Query: 631 NILRAAAL 654
            +L  A +
Sbjct: 72  YVLSGARI 79


>Z71185-12|CAA94906.3|  460|Caenorhabditis elegans Hypothetical
           protein C35A5.3 protein.
          Length = 460

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3

Query: 492 FVNIGANLFICAATRRFVFLDYP*YSWSK 578
           FV++G ++FI  A   F+F D P  SW++
Sbjct: 417 FVSLGVSMFIANAISVFIFTDQP-ASWTE 444


>AL021503-2|CAA16421.1|  320|Caenorhabditis elegans Hypothetical
           protein Y68A4A.3 protein.
          Length = 320

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +1

Query: 454 LFYSLIFMNVVPNLLILVP 510
           LFYSLIF + +P LL+ +P
Sbjct: 239 LFYSLIFQSAIPCLLMYLP 257


>Z70753-3|CAA94768.1|  343|Caenorhabditis elegans Hypothetical
           protein F40F9.4 protein.
          Length = 343

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +1

Query: 454 LFYSLIFMNVVPNLLILVPIFLFAL 528
           LFYSL+   ++P +L+ +PI ++ L
Sbjct: 241 LFYSLVLQTLIPFVLMHIPITIYYL 265


>Z49911-1|CAA90131.2|  647|Caenorhabditis elegans Hypothetical
           protein M28.1 protein.
          Length = 647

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 266 SPCCVPLDTCSHCLTIQCRHSTKRYSRTLRLQ 361
           SP C PL TC+ C   + R  T+R + ++RL+
Sbjct: 233 SPDCPPLTTCAPCACEERR--TRRATNSIRLE 262


>AF016442-4|AAB65915.1|  361|Caenorhabditis elegans Serpentine
           receptor, class n protein1 protein.
          Length = 361

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +1

Query: 439 DSAHYLFYSLIFMNVVPNLLILVPIFLFALLHAASY 546
           ++  +L    +F N++P ++I  P+FL A     SY
Sbjct: 247 ETHRHLTLLALFQNLIPAVVIAFPVFLVAFSFVMSY 282


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,558,432
Number of Sequences: 27780
Number of extensions: 319590
Number of successful extensions: 1187
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)