BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= P5PG0064 (526 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF022974-5|AAC48036.3| 347|Caenorhabditis elegans Seven tm rece... 28 4.7 AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 27 6.2 Z83238-5|CAB05796.1| 304|Caenorhabditis elegans Hypothetical pr... 27 8.2 Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 27 8.2 Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 27 8.2 Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 27 8.2 Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 27 8.2 AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 27 8.2 >AF022974-5|AAC48036.3| 347|Caenorhabditis elegans Seven tm receptor protein 208 protein. Length = 347 Score = 27.9 bits (59), Expect = 4.7 Identities = 12/51 (23%), Positives = 24/51 (47%) Frame = -1 Query: 508 VFDHEIKDIIAELLCTDFEEAALGLSVSLRYRAYAVSGTGPVLVVQNLLVF 356 + +++ ++ L C F + SV YR +AVSG + + + +F Sbjct: 83 LLSYDVLLLLVSLCCAFFGSLMVMFSVQFIYRFWAVSGNNSIKTFEGVRIF 133 >AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated ion channel protein 10 protein. Length = 493 Score = 27.5 bits (58), Expect = 6.2 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Frame = -3 Query: 506 FRPRDQGYHRRTFVYRFRGSCTWLVC--IPEIQSICSLWD 393 +R R R YRF C L+ +PEIQSIC + + Sbjct: 386 YRKRRSTVFRGVHNYRFNQECDDLMYSKVPEIQSICMMME 425 >Z83238-5|CAB05796.1| 304|Caenorhabditis elegans Hypothetical protein T08G3.6 protein. Length = 304 Score = 27.1 bits (57), Expect = 8.2 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +3 Query: 231 PGSYYCSWQHARWYSANLSIKPSR 302 P + Y SW++ RW +A +KP R Sbjct: 234 PCNEYTSWKYYRWTNAVRYVKPGR 257 >Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical protein C36B1.1d protein. Length = 1175 Score = 27.1 bits (57), Expect = 8.2 Identities = 15/50 (30%), Positives = 21/50 (42%) Frame = -3 Query: 440 WLVCIPEIQSICSLWDRACPRCTKPLGIPRVRNPHIDPISCRRLCLS*RF 291 W +C + + ACPR P + P I+ +RLCL RF Sbjct: 263 WKLCSEKHDTYTQRDAGACPRVQYPSSPAHLTTPAINLPDAQRLCLYFRF 312 >Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical protein C36B1.1a protein. Length = 1138 Score = 27.1 bits (57), Expect = 8.2 Identities = 15/50 (30%), Positives = 21/50 (42%) Frame = -3 Query: 440 WLVCIPEIQSICSLWDRACPRCTKPLGIPRVRNPHIDPISCRRLCLS*RF 291 W +C + + ACPR P + P I+ +RLCL RF Sbjct: 263 WKLCSEKHDTYTQRDAGACPRVQYPSSPAHLTTPAINLPDAQRLCLYFRF 312 >Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical protein C36B1.1d protein. Length = 1175 Score = 27.1 bits (57), Expect = 8.2 Identities = 15/50 (30%), Positives = 21/50 (42%) Frame = -3 Query: 440 WLVCIPEIQSICSLWDRACPRCTKPLGIPRVRNPHIDPISCRRLCLS*RF 291 W +C + + ACPR P + P I+ +RLCL RF Sbjct: 263 WKLCSEKHDTYTQRDAGACPRVQYPSSPAHLTTPAINLPDAQRLCLYFRF 312 >Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical protein C36B1.1a protein. Length = 1138 Score = 27.1 bits (57), Expect = 8.2 Identities = 15/50 (30%), Positives = 21/50 (42%) Frame = -3 Query: 440 WLVCIPEIQSICSLWDRACPRCTKPLGIPRVRNPHIDPISCRRLCLS*RF 291 W +C + + ACPR P + P I+ +RLCL RF Sbjct: 263 WKLCSEKHDTYTQRDAGACPRVQYPSSPAHLTTPAINLPDAQRLCLYFRF 312 >AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein protein. Length = 1117 Score = 27.1 bits (57), Expect = 8.2 Identities = 15/50 (30%), Positives = 21/50 (42%) Frame = -3 Query: 440 WLVCIPEIQSICSLWDRACPRCTKPLGIPRVRNPHIDPISCRRLCLS*RF 291 W +C + + ACPR P + P I+ +RLCL RF Sbjct: 263 WKLCSEKHDTYTQRDAGACPRVQYPSSPAHLTTPAINLPDAQRLCLYFRF 312 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,273,698 Number of Sequences: 27780 Number of extensions: 263057 Number of successful extensions: 864 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 847 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 864 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1028310386 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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