Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0054
         (431 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or cys...    33   0.12 
AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protei...    33   0.12 
AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or cys...    31   0.36 
AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin prote...    31   0.36 
Z81532-2|CAB04324.1|  290|Caenorhabditis elegans Hypothetical pr...    29   1.4  
Z78542-6|CAB01749.2|  695|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z68752-4|CAA92983.1|  447|Caenorhabditis elegans Hypothetical pr...    28   2.5  
Z93383-11|CAI58635.1|  279|Caenorhabditis elegans Hypothetical p...    28   3.3  
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical pr...    27   4.4  
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re...    27   4.4  
AF016421-10|AAC25792.1|  473|Caenorhabditis elegans Hypothetical...    27   5.8  
Z81055-4|CAB02893.1|  824|Caenorhabditis elegans Hypothetical pr...    27   7.7  
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p...    27   7.7  

>AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 362

 Score = 32.7 bits (71), Expect = 0.12
 Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
 Frame = +3

Query: 180 KSVVLSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRTEFASKSRDLRS-IKG 350
           +S+V S  S+   L+ +     G + +++   +  G  D+  +   F+  S+++++  KG
Sbjct: 22  ESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVE-HFSFVSKEVKNGTKG 80

Query: 351 VELKMANKVYVHDGGKLDENF 413
           VE+ +ANKVY+  G  ++  F
Sbjct: 81  VEVYLANKVYLKKGFTVNPTF 101


>AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protein 3
           protein.
          Length = 362

 Score = 32.7 bits (71), Expect = 0.12
 Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
 Frame = +3

Query: 180 KSVVLSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRTEFASKSRDLRS-IKG 350
           +S+V S  S+   L+ +     G + +++   +  G  D+  +   F+  S+++++  KG
Sbjct: 22  ESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVE-HFSFVSKEVKNGTKG 80

Query: 351 VELKMANKVYVHDGGKLDENF 413
           VE+ +ANKVY+  G  ++  F
Sbjct: 81  VEVYLANKVYLKKGFTVNPTF 101


>AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 359

 Score = 31.1 bits (67), Expect = 0.36
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = +3

Query: 183 SVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSI-KGVEL 359
           SVVLS  S+   LA +   + G T +EL   +G      I  EF+     +     GVE 
Sbjct: 24  SVVLSPLSISLGLALIHAGACGSTQKELEDVLG---GSRIFEEFSGLMEAVGDTDNGVET 80

Query: 360 KMANKVYVHDGGKLDENF 413
           K+ N+V+V+    + +++
Sbjct: 81  KIVNRVFVNQAYTIHQDY 98


>AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin protein
           2 protein.
          Length = 359

 Score = 31.1 bits (67), Expect = 0.36
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = +3

Query: 183 SVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSI-KGVEL 359
           SVVLS  S+   LA +   + G T +EL   +G      I  EF+     +     GVE 
Sbjct: 24  SVVLSPLSISLGLALIHAGACGSTQKELEDVLG---GSRIFEEFSGLMEAVGDTDNGVET 80

Query: 360 KMANKVYVHDGGKLDENF 413
           K+ N+V+V+    + +++
Sbjct: 81  KIVNRVFVNQAYTIHQDY 98


>Z81532-2|CAB04324.1|  290|Caenorhabditis elegans Hypothetical
           protein F36F2.2 protein.
          Length = 290

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 267 KALHGFHHQKLKLTEREEAAPKMPRGQRFSL 175
           K L   H  ++  T  EE+ P  P+GQRF L
Sbjct: 163 KGLEEVHEIEVDKTVIEESIPNQPKGQRFDL 193


>Z78542-6|CAB01749.2|  695|Caenorhabditis elegans Hypothetical
           protein F20D1.7 protein.
          Length = 695

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +3

Query: 69  IAIAAMAAVTNLSNVLKN-GNDNFTARMFTEVV-KNNPGKSVVLSAFSVLPPLAQLALAS 242
           +A+ ++  +    N+L+N G D+   R    V+ +NN  KS+ +  F  +P L  L L+ 
Sbjct: 124 MALTSLLELDLSDNMLENLGADSIHIRSIQRVILRNNQIKSIGVHVFRYMPTLKMLDLSG 183

Query: 243 DGET 254
           +  T
Sbjct: 184 NNMT 187


>Z68752-4|CAA92983.1|  447|Caenorhabditis elegans Hypothetical
           protein T12G3.4 protein.
          Length = 447

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 113 HIREICDGCHCRDGDSKQTNDCLHVCGLRLSNV 15
           H  ++  G H  DG  K+ N C    GLRLS+V
Sbjct: 147 HAVQLAQGNHDCDGSYKKMNLCGRPLGLRLSDV 179


>Z93383-11|CAI58635.1|  279|Caenorhabditis elegans Hypothetical
           protein F54B8.16 protein.
          Length = 279

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = -2

Query: 160 TSVNILAVKLSFPFLSTLERFVTAAIAAMAIVNKQMIVFMFV 35
           TSV +  +K +F F+ TLERF++         N++ I F ++
Sbjct: 87  TSVTMGIIKGTFAFMITLERFISVFFPIHYRNNRRKIPFYWI 128


>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
            F29D11.1 protein.
          Length = 4753

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
 Frame = -1

Query: 158  FGKHSGCEVIVSIFEHIREICDG--CHCRDG---DSKQTNDCLHV 39
            FG + GC+ I +      ++ DG  CHCRDG   D +   +C+ +
Sbjct: 4095 FGNNGGCKHICT------DVRDGFYCHCRDGFRPDPQSPKECIDI 4133


>Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical
           protein F57C7.4 protein.
          Length = 1484

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 153 TEVVKNNPGKSVVLSAFSVLPPLAQLAL 236
           T ++KN P KS V  +F++ P   QLA+
Sbjct: 674 TTIIKNVPSKSDVFVSFTIPPAGTQLAM 701


>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
            protein protein.
          Length = 4753

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
 Frame = -1

Query: 158  FGKHSGCEVIVSIFEHIREICDG--CHCRDG---DSKQTNDCLHV 39
            FG + GC+ I +      ++ DG  CHCRDG   D +   +C+ +
Sbjct: 4095 FGNNGGCKHICT------DVRDGFYCHCRDGFRPDPQSPKECIDI 4133


>AF016421-10|AAC25792.1|  473|Caenorhabditis elegans Hypothetical
           protein F44E7.7 protein.
          Length = 473

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 172 LFFTTSVNILAVKLSFPFLSTLE 104
           LFF  S  +L V + FPFL+T E
Sbjct: 443 LFFIVSGIVLIVNIPFPFLTTAE 465


>Z81055-4|CAB02893.1|  824|Caenorhabditis elegans Hypothetical
           protein F01G10.5 protein.
          Length = 824

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 99  NLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLS 197
           +L+  L  GNDN T      ++   P KSV  S
Sbjct: 658 SLAEFLSKGNDNETLEEMMRLIAQTPRKSVAFS 690


>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
           protein R05D3.1 protein.
          Length = 1053

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = +3

Query: 240 SDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENF 413
           SD + H    K  G  DDDAIR  F     D R  K    +  N++   D GK + ++
Sbjct: 531 SDLDHHTVNFKYTGTTDDDAIRMAFDRDKSDER--KEWIRRSENEITNEDDGKTEISY 586


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,410,881
Number of Sequences: 27780
Number of extensions: 181773
Number of successful extensions: 573
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)