Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0053
         (409 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49131-1|CAA88974.1|  122|Caenorhabditis elegans Hypothetical pr...    27   3.9  
AF016451-9|AAB66005.2|  524|Caenorhabditis elegans Udp-glucurono...    27   6.9  
U50309-2|AAG24136.2|  334|Caenorhabditis elegans Seven tm recept...    26   9.1  
U13019-10|AAC24442.1|  757|Caenorhabditis elegans Hypothetical p...    26   9.1  

>Z49131-1|CAA88974.1|  122|Caenorhabditis elegans Hypothetical
           protein ZC373.2 protein.
          Length = 122

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +1

Query: 130 FISHARRMCVCIFN*FNIN 186
           FIS+ RR CVC FN  N N
Sbjct: 74  FISNDRRTCVCCFNNTNRN 92


>AF016451-9|AAB66005.2|  524|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein51 protein.
          Length = 524

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 329 NIKYGCFSTIVFCSAACANF 270
           NI+Y C  TIVF + +C  F
Sbjct: 481 NIEYYCVDTIVFIAFSCVTF 500


>U50309-2|AAG24136.2|  334|Caenorhabditis elegans Seven tm receptor
           protein 146 protein.
          Length = 334

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = -3

Query: 359 FWFLFQIVSKNIKYG-CFSTIVFCSA 285
           FW L  +V+  +  G CF+ IVFC+A
Sbjct: 194 FWDLMLLVACILTIGGCFAIIVFCAA 219


>U13019-10|AAC24442.1|  757|Caenorhabditis elegans Hypothetical
           protein T12A2.2 protein.
          Length = 757

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 194 VIKLILNQLNIHTHIRRAC 138
           +I  IL+ LN H HIR  C
Sbjct: 100 LIHWILDSLNFHVHIREVC 118


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,440,164
Number of Sequences: 27780
Number of extensions: 115367
Number of successful extensions: 223
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)