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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0196
         (712 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099001-8|AAP13778.1|  435|Caenorhabditis elegans Dumpy : short...   366   e-102
AF099001-7|AAP13777.1|  441|Caenorhabditis elegans Dumpy : short...   358   3e-99
L26290-1|AAA27981.1|  441|Caenorhabditis elegans clathrin-associ...   355   1e-98
Z83115-4|CAB05557.3|  422|Caenorhabditis elegans Hypothetical pr...   171   3e-43
L26291-1|AAA72418.1|  422|Caenorhabditis elegans protein ( Caeno...   171   3e-43
AF003130-2|AAB54125.2|  426|Caenorhabditis elegans Adaptin, mu/m...   170   1e-42
U41023-4|AAA82343.2|  414|Caenorhabditis elegans Adaptin, mu/med...   105   4e-23
AF016440-4|AAB65902.1|  157|Caenorhabditis elegans Adaptin, smal...    42   3e-04
U21309-2|AAN73882.1|  515|Caenorhabditis elegans Hypothetical pr...    40   0.002
U53340-2|AAA96207.1|  142|Caenorhabditis elegans Ap-2 small chai...    35   0.066
AL021480-5|CAJ21557.1|  432|Caenorhabditis elegans Hypothetical ...    32   0.47 
AL021480-4|CAA16329.2|  431|Caenorhabditis elegans Hypothetical ...    32   0.47 
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U80027-19|AAC48129.2|  313|Caenorhabditis elegans F-box a protei...    28   5.7  
U21309-6|AAT92086.1|  541|Caenorhabditis elegans Hypothetical pr...    28   5.7  
U21309-5|AAT92085.1|  536|Caenorhabditis elegans Hypothetical pr...    28   5.7  
U21309-4|AAN73883.1|  546|Caenorhabditis elegans Hypothetical pr...    28   5.7  
AY314778-1|AAQ84885.1|  546|Caenorhabditis elegans calcitonin re...    28   5.7  
AY314777-1|AAQ84884.1|  541|Caenorhabditis elegans calcitonin re...    28   5.7  
AY314776-1|AAQ84883.1|  536|Caenorhabditis elegans calcitonin re...    28   5.7  
AL132862-5|CAB70227.1|  419|Caenorhabditis elegans Hypothetical ...    28   5.7  
AL132862-4|CAB60533.1|  420|Caenorhabditis elegans Hypothetical ...    28   5.7  
U13642-9|AAG00035.1|  187|Caenorhabditis elegans Clock (biologic...    28   7.6  

>AF099001-8|AAP13778.1|  435|Caenorhabditis elegans Dumpy : shorter
           than wild-typeprotein 23, isoform b protein.
          Length = 435

 Score =  366 bits (901), Expect = e-102
 Identities = 168/196 (85%), Positives = 187/196 (95%)
 Frame = +2

Query: 125 MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHIKR 304
           MIGGLFVYNHKGEVLISR+YRDD+ RNAVDAFRVNVIHARQQVRSPVTN+ARTSFFH+KR
Sbjct: 1   MIGGLFVYNHKGEVLISRIYRDDVTRNAVDAFRVNVIHARQQVRSPVTNMARTSFFHVKR 60

Query: 305 ANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGY 484
            N+W+ AVT+QNVNAAMVFEFL +  D MQSYFGK++EEN+KNNFVLIYELLDEILDFGY
Sbjct: 61  GNVWICAVTRQNVNAAMVFEFLKRFADTMQSYFGKLNEENVKNNFVLIYELLDEILDFGY 120

Query: 485 PQNSDTGVLKTFITQQGIKSASKEEQAQITSQVTGQIGWRREGIKYRRNELFLDVLEYVN 664
           PQN+D GVLKTFITQQG+++A+KEEQ+QITSQVTGQIGWRREGIKYRRNELFLDV+EYVN
Sbjct: 121 PQNTDPGVLKTFITQQGVRTATKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVIEYVN 180

Query: 665 LLMSPQGQVLSAHVAG 712
           LLM+ QGQVLSAHVAG
Sbjct: 181 LLMNQQGQVLSAHVAG 196


>AF099001-7|AAP13777.1|  441|Caenorhabditis elegans Dumpy : shorter
           than wild-typeprotein 23, isoform a protein.
          Length = 441

 Score =  358 bits (880), Expect = 3e-99
 Identities = 168/202 (83%), Positives = 187/202 (92%), Gaps = 6/202 (2%)
 Frame = +2

Query: 125 MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHIKR 304
           MIGGLFVYNHKGEVLISR+YRDD+ RNAVDAFRVNVIHARQQVRSPVTN+ARTSFFH+KR
Sbjct: 1   MIGGLFVYNHKGEVLISRIYRDDVTRNAVDAFRVNVIHARQQVRSPVTNMARTSFFHVKR 60

Query: 305 ANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGY 484
            N+W+ AVT+QNVNAAMVFEFL +  D MQSYFGK++EEN+KNNFVLIYELLDEILDFGY
Sbjct: 61  GNVWICAVTRQNVNAAMVFEFLKRFADTMQSYFGKLNEENVKNNFVLIYELLDEILDFGY 120

Query: 485 PQNSDTGVLKTFITQQGIKSA------SKEEQAQITSQVTGQIGWRREGIKYRRNELFLD 646
           PQN+D GVLKTFITQQG+++A      +KEEQ+QITSQVTGQIGWRREGIKYRRNELFLD
Sbjct: 121 PQNTDPGVLKTFITQQGVRTADAPVPVTKEEQSQITSQVTGQIGWRREGIKYRRNELFLD 180

Query: 647 VLEYVNLLMSPQGQVLSAHVAG 712
           V+EYVNLLM+ QGQVLSAHVAG
Sbjct: 181 VIEYVNLLMNQQGQVLSAHVAG 202


>L26290-1|AAA27981.1|  441|Caenorhabditis elegans
           clathrin-associated protein homologueprotein.
          Length = 441

 Score =  355 bits (874), Expect = 1e-98
 Identities = 167/202 (82%), Positives = 186/202 (92%), Gaps = 6/202 (2%)
 Frame = +2

Query: 125 MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHIKR 304
           MIGGLFVYNHKGEVLISR+YRDD+ RNAVDAFRVNVIHARQQVRSPVTN+ARTSFFH+KR
Sbjct: 1   MIGGLFVYNHKGEVLISRIYRDDVTRNAVDAFRVNVIHARQQVRSPVTNMARTSFFHVKR 60

Query: 305 ANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGY 484
            N+W+ AVT+QNVNAAMVF FL +  D MQSYFGK++EEN+KNNFVLIYELLDEILDFGY
Sbjct: 61  GNVWICAVTRQNVNAAMVFAFLKRFADTMQSYFGKLNEENVKNNFVLIYELLDEILDFGY 120

Query: 485 PQNSDTGVLKTFITQQGIKSA------SKEEQAQITSQVTGQIGWRREGIKYRRNELFLD 646
           PQN+D GVLKTFITQQG+++A      +KEEQ+QITSQVTGQIGWRREGIKYRRNELFLD
Sbjct: 121 PQNTDPGVLKTFITQQGVRTADAPVPVTKEEQSQITSQVTGQIGWRREGIKYRRNELFLD 180

Query: 647 VLEYVNLLMSPQGQVLSAHVAG 712
           V+EYVNLLM+ QGQVLSAHVAG
Sbjct: 181 VIEYVNLLMNQQGQVLSAHVAG 202


>Z83115-4|CAB05557.3|  422|Caenorhabditis elegans Hypothetical
           protein K11D2.3a protein.
          Length = 422

 Score =  171 bits (417), Expect = 3e-43
 Identities = 82/194 (42%), Positives = 125/194 (64%), Gaps = 2/194 (1%)
 Frame = +2

Query: 137 LFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRS--PVTNIARTSFFHIKRAN 310
           +F+ + KG+ +ISR YR DI   A+D F ++++  +++  S  PV     T+F  IK  N
Sbjct: 6   MFILDLKGKTIISRNYRGDIDMTAIDKF-IHLLMEKEEEGSAAPVLTYQDTNFVFIKHTN 64

Query: 311 IWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQ 490
           I+L +  + NVN  M+  FL K ++V   YF  + EE++++NFV+IYELLDE++DFG+PQ
Sbjct: 65  IYLVSACRSNVNVTMILSFLYKCVEVFSEYFKDVEEESVRDNFVVIYELLDEMMDFGFPQ 124

Query: 491 NSDTGVLKTFITQQGIKSASKEEQAQITSQVTGQIGWRREGIKYRRNELFLDVLEYVNLL 670
            +++ +L+ +ITQ+G K  S          VT  + WR EGIKYR+NE+FLDV+E VN+L
Sbjct: 125 TTESRILQEYITQEGQKLISAPRPPM---AVTNAVSWRSEGIKYRKNEVFLDVIESVNML 181

Query: 671 MSPQGQVLSAHVAG 712
            S  G VL + + G
Sbjct: 182 ASANGTVLQSEIVG 195


>L26291-1|AAA72418.1|  422|Caenorhabditis elegans protein (
           Caenorhabditis elegans(unc-101) mRNA, complete cds. ).
          Length = 422

 Score =  171 bits (417), Expect = 3e-43
 Identities = 82/194 (42%), Positives = 125/194 (64%), Gaps = 2/194 (1%)
 Frame = +2

Query: 137 LFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRS--PVTNIARTSFFHIKRAN 310
           +F+ + KG+ +ISR YR DI   A+D F ++++  +++  S  PV     T+F  IK  N
Sbjct: 6   MFILDLKGKTIISRNYRGDIDMTAIDKF-IHLLMEKEEEGSAAPVLTYQDTNFVFIKHTN 64

Query: 311 IWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQ 490
           I+L +  + NVN  M+  FL K ++V   YF  + EE++++NFV+IYELLDE++DFG+PQ
Sbjct: 65  IYLVSACRSNVNVTMILSFLYKCVEVFSEYFKDVEEESVRDNFVVIYELLDEMMDFGFPQ 124

Query: 491 NSDTGVLKTFITQQGIKSASKEEQAQITSQVTGQIGWRREGIKYRRNELFLDVLEYVNLL 670
            +++ +L+ +ITQ+G K  S          VT  + WR EGIKYR+NE+FLDV+E VN+L
Sbjct: 125 TTESRILQEYITQEGQKLISAPRPPM---AVTNAVSWRSEGIKYRKNEVFLDVIESVNML 181

Query: 671 MSPQGQVLSAHVAG 712
            S  G VL + + G
Sbjct: 182 ASANGTVLQSEIVG 195


>AF003130-2|AAB54125.2|  426|Caenorhabditis elegans Adaptin,
           mu/medium chain (clathrinassociated complex) protein 1
           protein.
          Length = 426

 Score =  170 bits (413), Expect = 1e-42
 Identities = 83/196 (42%), Positives = 125/196 (63%), Gaps = 1/196 (0%)
 Frame = +2

Query: 128 IGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQ-VRSPVTNIARTSFFHIKR 304
           I GLF+ + KG V+ISR YR D+  + ++ F   ++    +   SPV      S+ +IK 
Sbjct: 3   ISGLFILDLKGNVVISRNYRGDVDMSCIEKFMPLLVEKEDEGSASPVLVHQGISYTYIKY 62

Query: 305 ANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGY 484
            N++L  ++K+N N  +V   L KI++V   YF  + EE +++NFV+IYEL DE+LDFGY
Sbjct: 63  MNVYLVTISKKNTNVILVLSALYKIVEVFCEYFKTLEEEAVRDNFVIIYELFDEMLDFGY 122

Query: 485 PQNSDTGVLKTFITQQGIKSASKEEQAQITSQVTGQIGWRREGIKYRRNELFLDVLEYVN 664
           PQ +++ +L+ FITQQG    ++ E  +    VT  + WR EGIKYR+NE+FLDV+E VN
Sbjct: 123 PQTTESKILQEFITQQG----NRLETVRPPMAVTNAVSWRSEGIKYRKNEVFLDVIESVN 178

Query: 665 LLMSPQGQVLSAHVAG 712
           +L + QG VL + + G
Sbjct: 179 MLANAQGTVLRSEIVG 194


>U41023-4|AAA82343.2|  414|Caenorhabditis elegans Adaptin, mu/medium
           chain (clathrinassociated complex) protein 3 protein.
          Length = 414

 Score =  105 bits (251), Expect = 4e-23
 Identities = 60/206 (29%), Positives = 108/206 (52%), Gaps = 10/206 (4%)
 Frame = +2

Query: 125 MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAF---RVNVIHARQQVRSPVTNIARTSFFH 295
           M+  LF  N  G+VL+ + ++  I R+  D F   +   IH       P+ +       +
Sbjct: 1   MLNSLFFVNSSGDVLLEKHWKSVIHRSICDYFFDIQKKSIHPEDV--PPIISTPHHYLIN 58

Query: 296 IKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILD 475
           + + N++L AV        MV EFL ++I     YF + S+ ++K N V+++ELLDE+LD
Sbjct: 59  VYQNNLFLVAVITVETPPLMVIEFLHRVIQTFTQYFDEFSDSSMKENCVMVFELLDEMLD 118

Query: 476 FGYPQNSDTGVLKTFITQQG-IKSASKEEQAQIT---SQVTGQ---IGWRREGIKYRRNE 634
            G+P  ++  +L+  I     +++ + +   +     +  TGQ   I WRR+G+KY  NE
Sbjct: 119 NGFPLVTEMNILQDLIKPPNFLRNIANQVTGRTNLSETLPTGQLSNIPWRRQGVKYTNNE 178

Query: 635 LFLDVLEYVNLLMSPQGQVLSAHVAG 712
            + DV+E +++++  QG  + A + G
Sbjct: 179 AYFDVIEEIDVIVDKQGSTVFAEIQG 204


>AF016440-4|AAB65902.1|  157|Caenorhabditis elegans Adaptin, small
           chain (clathrinassociated complex) protein 1 protein.
          Length = 157

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
 Frame = +2

Query: 305 ANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFG- 481
           A+++     +QN N  +  E + + ++++  YFG + E +I  NF   Y +LDE L  G 
Sbjct: 63  ASLYFCCAIEQNDNELITLEVIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLAGE 122

Query: 482 YPQNSDTGVLKTFITQQGIK 541
             + S   VLK    Q  I+
Sbjct: 123 IQETSKKQVLKAIAAQDLIQ 142


>U21309-2|AAN73882.1|  515|Caenorhabditis elegans Hypothetical
           protein C13B9.3 protein.
          Length = 515

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
 Frame = +2

Query: 143 VYNHKGEVLISRVYRDDIGRNA----VDAFRVNVIHARQQVRSPVTNIARTSFFHIKRA- 307
           + +  G++L++R + +D+ R+     VDAF   + + ++      T +   S  ++    
Sbjct: 8   ILSKTGKLLVARQFVNDMMRSRLEGLVDAFPKLIGNEKEAATRQHTFVETDSVRYVYHPL 67

Query: 308 -NIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENI-KNNFVLIYELLDEILDFG 481
            NI+L  VT +N N     E L   + V+  Y     E+ I  ++F LI+   DE++  G
Sbjct: 68  DNIYLVLVTTKNSNILEDLETLRLFVRVIPEYCRSNEEKEILAHDFDLIF-AFDEVVTLG 126

Query: 482 YPQNSDTGVLKTF 520
           Y ++ +   ++TF
Sbjct: 127 YRESVNLAQIRTF 139


>U53340-2|AAA96207.1|  142|Caenorhabditis elegans Ap-2 small chain
           (clathrin associatedcomplex) protein 2 protein.
          Length = 142

 Score = 34.7 bits (76), Expect = 0.066
 Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 7/140 (5%)
 Frame = +2

Query: 125 MIGGLFVYNHKGEVLISRVYR--DDIGRNAVDAFRVNVIHARQQVRSPV-TNIARTSFFH 295
           MI  + + N  G+  +++ Y   DD  +  +    +  +HA   VR    TN      F 
Sbjct: 1   MIRFILIQNRAGKTRLAKWYMHFDDDEKQKL----IEEVHACVTVRDAKHTNFVEFRNFK 56

Query: 296 I---KRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDE 466
           I   + A ++         N     E +   ++V+  YF  + E ++  NF  +Y ++DE
Sbjct: 57  IVYRRYAGLYFCICVDITDNNLYYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDE 116

Query: 467 ILDFG-YPQNSDTGVLKTFI 523
           +   G   + S T VLK  +
Sbjct: 117 MFLAGEIRETSQTKVLKQLL 136


>AL021480-5|CAJ21557.1|  432|Caenorhabditis elegans Hypothetical
           protein Y39E4A.3b protein.
          Length = 432

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
 Frame = +2

Query: 449 YELLDEILDFGYPQNSDTGVLKTFITQQGIKSASKEE--QAQITSQVTGQIGWRREGIKY 622
           Y   DE+  +G   +  T   K +IT++G  +  KE   Q ++  +V  +     +  K 
Sbjct: 329 YRSSDEVQTWGDKDHPITR-FKKYITERGWWNEEKEMEWQKEVKKRVLTEFAAAEKRKKA 387

Query: 623 RRNELFLDVLEYVNLLMSPQGQVLSAHVA 709
             ++LF DV + + L +  Q   L AHVA
Sbjct: 388 HYHDLFEDVYDELPLRLRRQRDELDAHVA 416


>AL021480-4|CAA16329.2|  431|Caenorhabditis elegans Hypothetical
           protein Y39E4A.3a protein.
          Length = 431

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
 Frame = +2

Query: 449 YELLDEILDFGYPQNSDTGVLKTFITQQGIKSASKEE--QAQITSQVTGQIGWRREGIKY 622
           Y   DE+  +G   +  T   K +IT++G  +  KE   Q ++  +V  +     +  K 
Sbjct: 328 YRSSDEVQTWGDKDHPITR-FKKYITERGWWNEEKEMEWQKEVKKRVLTEFAAAEKRKKA 386

Query: 623 RRNELFLDVLEYVNLLMSPQGQVLSAHVA 709
             ++LF DV + + L +  Q   L AHVA
Sbjct: 387 HYHDLFEDVYDELPLRLRRQRDELDAHVA 415


>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical protein
            C14C10.5 protein.
          Length = 1908

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = +2

Query: 170  ISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFF 292
            + R++RDDIG   V++   N I  R++    ++ + +  FF
Sbjct: 1761 VFRIHRDDIGMILVNSLNDNQIEVRERATDALSTLLQAKFF 1801


>U80027-19|AAC48129.2|  313|Caenorhabditis elegans F-box a protein
           protein 64 protein.
          Length = 313

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +2

Query: 110 EASPTMIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIH 238
           +++P  I  +F  ++ G    S  Y DDI + A+D FRV   H
Sbjct: 264 QSNPVDIAKVFKPDYVGGNEYSFEYSDDIHKFAIDCFRVGESH 306


>U21309-6|AAT92086.1|  541|Caenorhabditis elegans Hypothetical
           protein C13B9.4c protein.
          Length = 541

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
 Frame = +2

Query: 263 VTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENI----- 427
           + N+ R  +  ++ +N    A  K++V AAM+   LL + ++MQ+     + +NI     
Sbjct: 350 ICNVIRVLYSKVRESNNTSEAGLKKSVKAAMMLLPLLGVPNIMQTIPFAPTRDNIMVFAV 409

Query: 428 ---KNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQQGIKSASKEE 559
                +F  +Y+ L     + +       VLKTF  +  +   S+ E
Sbjct: 410 WTYTASFTYMYQGLMVASIYCFTNKEVNHVLKTFYARYRLLHKSQNE 456


>U21309-5|AAT92085.1|  536|Caenorhabditis elegans Hypothetical
           protein C13B9.4b protein.
          Length = 536

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
 Frame = +2

Query: 263 VTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENI----- 427
           + N+ R  +  ++ +N    A  K++V AAM+   LL + ++MQ+     + +NI     
Sbjct: 340 ICNVIRVLYSKVRESNNTSEAGLKKSVKAAMMLLPLLGVPNIMQTIPFAPTRDNIMVFAV 399

Query: 428 ---KNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQQGIKSASKEE 559
                +F  +Y+ L     + +       VLKTF  +  +   S+ E
Sbjct: 400 WTYTASFTYMYQGLMVASIYCFTNKEVNHVLKTFYARYRLLHKSQNE 446


>U21309-4|AAN73883.1|  546|Caenorhabditis elegans Hypothetical
           protein C13B9.4a protein.
          Length = 546

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
 Frame = +2

Query: 263 VTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENI----- 427
           + N+ R  +  ++ +N    A  K++V AAM+   LL + ++MQ+     + +NI     
Sbjct: 350 ICNVIRVLYSKVRESNNTSEAGLKKSVKAAMMLLPLLGVPNIMQTIPFAPTRDNIMVFAV 409

Query: 428 ---KNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQQGIKSASKEE 559
                +F  +Y+ L     + +       VLKTF  +  +   S+ E
Sbjct: 410 WTYTASFTYMYQGLMVASIYCFTNKEVNHVLKTFYARYRLLHKSQNE 456


>AY314778-1|AAQ84885.1|  546|Caenorhabditis elegans calcitonin
           receptor-like proteinSEB-1C protein.
          Length = 546

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
 Frame = +2

Query: 263 VTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENI----- 427
           + N+ R  +  ++ +N    A  K++V AAM+   LL + ++MQ+     + +NI     
Sbjct: 350 ICNVIRVLYSKVRESNNTSEAGLKKSVKAAMMLLPLLGVPNIMQTIPFAPTRDNIMVFAV 409

Query: 428 ---KNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQQGIKSASKEE 559
                +F  +Y+ L     + +       VLKTF  +  +   S+ E
Sbjct: 410 WTYTASFTYMYQGLMVASIYCFTNKEVNHVLKTFYARYRLLHKSQNE 456


>AY314777-1|AAQ84884.1|  541|Caenorhabditis elegans calcitonin
           receptor-like proteinSEB-1B protein.
          Length = 541

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
 Frame = +2

Query: 263 VTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENI----- 427
           + N+ R  +  ++ +N    A  K++V AAM+   LL + ++MQ+     + +NI     
Sbjct: 350 ICNVIRVLYSKVRESNNTSEAGLKKSVKAAMMLLPLLGVPNIMQTIPFAPTRDNIMVFAV 409

Query: 428 ---KNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQQGIKSASKEE 559
                +F  +Y+ L     + +       VLKTF  +  +   S+ E
Sbjct: 410 WTYTASFTYMYQGLMVASIYCFTNKEVNHVLKTFYARYRLLHKSQNE 456


>AY314776-1|AAQ84883.1|  536|Caenorhabditis elegans calcitonin
           receptor-like proteinSEB-1A protein.
          Length = 536

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
 Frame = +2

Query: 263 VTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENI----- 427
           + N+ R  +  ++ +N    A  K++V AAM+   LL + ++MQ+     + +NI     
Sbjct: 340 ICNVIRVLYSKVRESNNTSEAGLKKSVKAAMMLLPLLGVPNIMQTIPFAPTRDNIMVFAV 399

Query: 428 ---KNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQQGIKSASKEE 559
                +F  +Y+ L     + +       VLKTF  +  +   S+ E
Sbjct: 400 WTYTASFTYMYQGLMVASIYCFTNKEVNHVLKTFYARYRLLHKSQNE 446


>AL132862-5|CAB70227.1|  419|Caenorhabditis elegans Hypothetical
           protein Y73F8A.9 protein.
          Length = 419

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +1

Query: 208 CGRIQSECDPCSPAGAITCYQHCTHIFLPYQACKYLAGSSHKAKCERGH 354
           C + Q     C+PA   +CYQ C+   L    C  L  S +   C++ +
Sbjct: 361 CIQQQQPMQQCAPACTQSCYQSCSTAQLVQMPC--LTQSVNSCSCQQNY 407


>AL132862-4|CAB60533.1|  420|Caenorhabditis elegans Hypothetical
           protein Y73F8A.8 protein.
          Length = 420

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +1

Query: 208 CGRIQSECDPCSPAGAITCYQHCTHIFLPYQACKYLAGSSHKAKCERGH 354
           C + Q     C+PA   +CYQ C+   L    C  L  S +   C++ +
Sbjct: 362 CIQQQQPMQQCAPACTQSCYQSCSTAQLVQMPC--LTQSVNSCSCQQNY 408


>U13642-9|AAG00035.1|  187|Caenorhabditis elegans Clock (biological
           timing) abnormalityprotein 1 protein.
          Length = 187

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
 Frame = -1

Query: 499 IRILRVTKVQDLIKQLIDQNKVILDVLFRNLAKIRLHH--INDLQQELKYHGRVHILLCD 326
           + +L+ + V  +IK++ D+ K  LD + R  AK  + H   + +     Y   V   L  
Sbjct: 41  LAVLQGSSVGSVIKKMWDEEKEHLDTMERLAAKHNVPHTVFSPVFSVAAYALGVGSALLG 100

Query: 325 CCQPNICTLDMEERCACNVGNR*SHLLASMDHIHSECVHSIT 200
                 CT+ +EE    +  ++   LLA     H E +  +T
Sbjct: 101 KEGAMACTIAVEELIGQHYNDQLKELLADDPETHKELLKILT 142


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,520,105
Number of Sequences: 27780
Number of extensions: 354750
Number of successful extensions: 1059
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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