BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Nnor0144 (617 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z70310-3|CAA94365.1| 506|Caenorhabditis elegans Hypothetical pr... 29 3.5 Z49888-2|CAA90061.1| 1071|Caenorhabditis elegans Hypothetical pr... 28 4.6 Z75545-5|CAA99883.3| 836|Caenorhabditis elegans Hypothetical pr... 28 6.1 U80030-13|AAG24169.1| 831|Caenorhabditis elegans Hypothetical p... 27 8.1 >Z70310-3|CAA94365.1| 506|Caenorhabditis elegans Hypothetical protein R11A8.3 protein. Length = 506 Score = 28.7 bits (61), Expect = 3.5 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 3/63 (4%) Frame = -2 Query: 601 PRIFCKVTFLQDLYVCSLCNCLFGSMFLSCLNQ---NPSF*SNYSFCKLTILRPIHVSRS 431 PRIF K+ + +V + N F +FLS L Q + Y C I + I + + Sbjct: 104 PRIFYKLLKVSGTFVTACQNMAFDHLFLSSLQQQKFDVGLVEQYDSCGFGIFKSIGIENT 163 Query: 430 AYI 422 ++ Sbjct: 164 VWL 166 >Z49888-2|CAA90061.1| 1071|Caenorhabditis elegans Hypothetical protein F47A4.5 protein. Length = 1071 Score = 28.3 bits (60), Expect = 4.6 Identities = 11/47 (23%), Positives = 27/47 (57%) Frame = +1 Query: 235 LINLEVIIDIEHELRKESGDLISLMFLLYDDPDIALVKLTAYQQSSN 375 L+N +V + ++ +++ +G+ L+F+ PD+ + +T Y +N Sbjct: 561 LLNRKVELGLDIDVKNNAGETALLLFITTRKPDLLPLLVTLYAHGAN 607 >Z75545-5|CAA99883.3| 836|Caenorhabditis elegans Hypothetical protein K10D3.1 protein. Length = 836 Score = 27.9 bits (59), Expect = 6.1 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +2 Query: 362 SNLVMHIMSIPCFKIGF*RQNVS 430 S ++ H+ IP FK+GF R NV+ Sbjct: 814 SQVIRHVNVIPSFKLGFFRWNVN 836 >U80030-13|AAG24169.1| 831|Caenorhabditis elegans Hypothetical protein K12D9.12 protein. Length = 831 Score = 27.5 bits (58), Expect = 8.1 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Frame = +1 Query: 226 HSNLINLEVIIDIEHELRKESGDLISLMFLLYDDPD---IALVKLTAYQQSSNAYH 384 HSN+ NL + ++E +G + F L+D+P+ + KL ++ + + YH Sbjct: 215 HSNIQNLSCLENLEILKISNNGSGEQIDFNLHDNPEMIRLGFPKLEEFKNAHDTYH 270 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,190,168 Number of Sequences: 27780 Number of extensions: 294082 Number of successful extensions: 825 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 781 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 825 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1342816466 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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