Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0138
(317 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 51 2e-07
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 51 2e-07
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 51 2e-07
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 51 2e-07
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 51 2e-07
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 51 2e-07
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 50 3e-07
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 50 4e-07
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 47 3e-06
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 46 4e-06
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 46 4e-06
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 46 4e-06
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 45 1e-05
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 44 2e-05
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 44 2e-05
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 44 2e-05
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 44 2e-05
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 44 2e-05
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 44 2e-05
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 44 2e-05
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 44 2e-05
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 42 7e-05
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 42 7e-05
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 42 7e-05
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 42 1e-04
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 42 1e-04
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 41 2e-04
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 40 3e-04
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 40 3e-04
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 40 4e-04
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 40 4e-04
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 40 4e-04
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 40 4e-04
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 40 5e-04
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 40 5e-04
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 40 5e-04
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 40 5e-04
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 40 5e-04
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 40 5e-04
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 40 5e-04
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 39 7e-04
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 39 7e-04
AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine... 39 7e-04
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 39 9e-04
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 38 0.001
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 38 0.001
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 38 0.002
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 38 0.002
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 38 0.002
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 37 0.003
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 37 0.003
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 37 0.003
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 37 0.003
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 37 0.003
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 37 0.003
Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical pr... 37 0.004
AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic ace... 37 0.004
Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical p... 36 0.005
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 36 0.005
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 36 0.005
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 36 0.005
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 36 0.005
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 36 0.005
Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical pr... 36 0.008
U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic acety... 36 0.008
U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic acety... 36 0.008
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 35 0.011
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 35 0.015
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 34 0.019
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 34 0.019
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 34 0.019
U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine r... 34 0.025
AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine ... 34 0.025
AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine ... 34 0.025
AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical ... 33 0.034
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 33 0.045
AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine... 33 0.045
AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholin... 33 0.045
Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical pr... 33 0.059
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 33 0.059
AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ... 33 0.059
Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical p... 32 0.078
AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic ace... 32 0.078
AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ... 32 0.10
Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical pr... 31 0.18
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 31 0.18
AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical ... 31 0.18
Z83120-8|CAE46678.2| 511|Caenorhabditis elegans Hypothetical pr... 30 0.41
Z83120-7|CAB51466.2| 514|Caenorhabditis elegans Hypothetical pr... 30 0.41
AY523515-1|AAR98637.1| 553|Caenorhabditis elegans acetylcholine... 30 0.41
Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical pr... 29 0.73
Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical pr... 29 0.96
Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical pr... 28 1.3
Z81125-6|CAI79225.1| 234|Caenorhabditis elegans Hypothetical pr... 28 1.3
Z81125-5|CAB03381.2| 398|Caenorhabditis elegans Hypothetical pr... 28 1.3
U14524-1|AAA50785.1| 461|Caenorhabditis elegans avermectin-sens... 28 1.3
AF408760-1|AAO27839.1| 318|Caenorhabditis elegans unknown prote... 28 1.3
Z93397-1|CAB07719.3| 550|Caenorhabditis elegans Hypothetical pr... 28 1.7
AF498370-1|AAN65376.1| 550|Caenorhabditis elegans GABA-A recept... 28 1.7
Z83104-2|CAB54203.1| 563|Caenorhabditis elegans Hypothetical pr... 26 6.8
Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical pr... 26 6.8
EF472000-1|ABQ96385.1| 1142|Caenorhabditis elegans SMG-3 protein. 26 6.8
AF101309-5|ABD94097.1| 543|Caenorhabditis elegans Hypothetical ... 26 6.8
AC084197-22|AAK68590.2| 1142|Caenorhabditis elegans Suppressor w... 26 6.8
U14635-12|AAC46655.1| 159|Caenorhabditis elegans Phosphodiester... 25 8.9
U00063-5|AAK18963.1| 182|Caenorhabditis elegans Hypothetical pr... 25 8.9
AC006677-8|AAF39943.1| 278|Caenorhabditis elegans Dehydrogenase... 25 8.9
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 50.8 bits (116), Expect = 2e-07
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +2
Query: 68 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 244
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 245 EWG--CSTWLVSSERLWRPDVVLLN 313
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 50.8 bits (116), Expect = 2e-07
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +2
Query: 68 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 244
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 245 EWG--CSTWLVSSERLWRPDVVLLN 313
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 50.8 bits (116), Expect = 2e-07
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +2
Query: 68 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 244
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 245 EWG--CSTWLVSSERLWRPDVVLLN 313
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 50.8 bits (116), Expect = 2e-07
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +2
Query: 68 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 244
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 245 EWG--CSTWLVSSERLWRPDVVLLN 313
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 50.8 bits (116), Expect = 2e-07
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +2
Query: 68 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 244
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 245 EWG--CSTWLVSSERLWRPDVVLLN 313
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 50.8 bits (116), Expect = 2e-07
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +2
Query: 68 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 244
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 245 EWG--CSTWLVSSERLWRPDVVLLN 313
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 50.4 bits (115), Expect = 3e-07
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Frame = +2
Query: 5 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHL-RHANIRE 169
FLL I +S ++++LL Y++ P + V +L R ++ E
Sbjct: 11 FLLVIFILHIVTINANKHVSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVDE 70
Query: 170 SESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 313
+ L+M W DK+L+WN +WG ++ + S+++W PD+VL N
Sbjct: 71 VNQVLTTSLWLEMQWYDKKLTWNPTDWGGVEYIHIPSDQIWIPDIVLYN 119
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 50.0 bits (114), Expect = 4e-07
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Frame = +2
Query: 11 LTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVR 187
+T +A +E +S S + LL +++ SPPD ++ ++ + L H I E ++
Sbjct: 55 VTVGVAEFSEQYQGSS-SRLTRHLLEKHNKCSPPDGRVDISHNIELVHIIGINELNQNMQ 113
Query: 188 ILADLQMNWIDKRLSWNAGEW-GCS-TWLVSSERLWRPDVVLLN 313
+L + W D LSW E+ G TWL +W PD+++ N
Sbjct: 114 VLVYIVQQWTDASLSWKVEEFRGIKHTWL-PEHSIWIPDIIVFN 156
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 46.8 bits (106), Expect = 3e-06
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +2
Query: 92 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL- 268
YD E+P + L +L+ ++E + + ++ ++ W D RLSWNA W +T +
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASAWQNTTMIY 122
Query: 269 VSSERLWRPDV 301
+ +++W P +
Sbjct: 123 MKQDKVWSPTI 133
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 46.4 bits (105), Expect = 4e-06
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Frame = +2
Query: 8 LLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRES 172
LL I+ E + D L+ Y+R + P+ + + L L L ++ E
Sbjct: 10 LLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEI 69
Query: 173 ESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 313
+ + L+ WID++LSW+ + G + V E +W PD+VL N
Sbjct: 70 DQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYN 117
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 46.4 bits (105), Expect = 4e-06
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Frame = +2
Query: 8 LLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRES 172
LL I+ E + D L+ Y+R + P+ + + L L L ++ E
Sbjct: 10 LLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEI 69
Query: 173 ESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 313
+ + L+ WID++LSW+ + G + V E +W PD+VL N
Sbjct: 70 DQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYN 117
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 46.4 bits (105), Expect = 4e-06
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Frame = +2
Query: 8 LLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRES 172
LL I+ E + D L+ Y+R + P+ + + L L L ++ E
Sbjct: 10 LLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEI 69
Query: 173 ESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 313
+ + L+ WID++LSW+ + G + V E +W PD+VL N
Sbjct: 70 DQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYN 117
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 44.8 bits (101), Expect = 1e-05
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 158 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 313
++ E + + + L +W+D RLSWN E+G T + E LW PD++L N
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPGEMLWLPDIILYN 96
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 44.4 bits (100), Expect = 2e-05
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 158 NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 313
N+ E ++ L M W D +L+WN E+G S V S+R+W PD+VL N
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFN 151
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 44.4 bits (100), Expect = 2e-05
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 158 NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 313
N+ E ++ L M W D +L+WN E+G S V S+R+W PD+VL N
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFN 151
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 44.0 bits (99), Expect = 2e-05
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Frame = +2
Query: 8 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 172
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 173 ESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNA 316
V + A L W D L W+ E+G T + + ++W+PDV+L N+
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNS 114
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 44.0 bits (99), Expect = 2e-05
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 200 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 313
L +NW+D RLSWN W + R+W+PD++L+N
Sbjct: 165 LNINWMDPRLSWNESLWSEIKAIYIPHARIWKPDIILVN 203
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 44.0 bits (99), Expect = 2e-05
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Frame = +2
Query: 8 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 172
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 173 ESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNA 316
V + A L W D L W+ E+G T + + ++W+PDV+L N+
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNS 114
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 44.0 bits (99), Expect = 2e-05
Identities = 20/95 (21%), Positives = 42/95 (44%)
Frame = +2
Query: 29 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQM 208
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 209 NWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 313
+W D +SW+ +WG S ++W P++V +N
Sbjct: 114 SWNDTMVSWDKEQWGLSWLNFYWIQIWTPNIVQIN 148
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 44.0 bits (99), Expect = 2e-05
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Frame = +2
Query: 8 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 172
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 173 ESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNA 316
V + A L W D L W+ E+G T + + ++W+PDV+L N+
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNS 114
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 44.0 bits (99), Expect = 2e-05
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Frame = +2
Query: 8 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 172
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 173 ESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNA 316
V + A L W D L W+ E+G T + + ++W+PDV+L N+
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNS 114
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 42.3 bits (95), Expect = 7e-05
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Frame = +2
Query: 68 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 232
+ + L+A Y++ P S+ +VV L L ++ E + LQ +W+D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 233 WNAGEWG-CSTWLVSSERLWRPDVVLLN 313
W+ E+G V S+ +W PDVVL N
Sbjct: 90 WDPVEYGGVEVLYVPSDTIWLPDVVLYN 117
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 42.3 bits (95), Expect = 7e-05
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Frame = +2
Query: 68 MIDSLLATYDRESPP--DSK--IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 232
+I+ L++ Y RE P DS +VV+L + L+ N+ E E + + A L+ W D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 233 WNAGEWGCSTWL-VSSERLWRPDVVLLNA 316
W + T L + LW PD++L N+
Sbjct: 85 WEPTAYENVTDLRHPPDALWTPDILLYNS 113
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 42.3 bits (95), Expect = 7e-05
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Frame = +2
Query: 68 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 232
+ + L+A Y++ P S+ +VV L L ++ E + LQ +W+D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 233 WNAGEWG-CSTWLVSSERLWRPDVVLLN 313
W+ E+G V S+ +W PDVVL N
Sbjct: 90 WDPVEYGGVEVLYVPSDTIWLPDVVLYN 117
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 41.9 bits (94), Expect = 1e-04
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Frame = +2
Query: 71 IDSLLATYDRESP----PDSKIVVNLTL---HLRHANIRESESTVRILADLQMNWIDKRL 229
+ + A +D P PD+ N TL +L+ + E E V ++ +L W D RL
Sbjct: 50 VSPVYAWFDTSKPLGYDPDAPQRYNYTLFLYNLKLIQVNEPEEQVSVVLELMEYWYDPRL 109
Query: 230 SWNAGEWGCSTWLVS-SERLWRP 295
SWNA ++ T + + E++W P
Sbjct: 110 SWNASDYKNVTAIFTRQEKIWSP 132
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 41.9 bits (94), Expect = 1e-04
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 107 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSER 283
PP +++ + + + L+ ++ E E V L D W D+RL WN E+ G S V
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYGGISHIYVPQRM 109
Query: 284 LWRPDVVLLNA 316
+W P+V + +A
Sbjct: 110 IWLPEVTIADA 120
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 41.1 bits (92), Expect = 2e-04
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 200 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 313
L+M W D RL W+ G WG L V +++W PD++L N
Sbjct: 77 LEMQWFDYRLMWDPGRWGKIRKLHVPVDQIWIPDILLYN 115
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 40.3 bits (90), Expect = 3e-04
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Frame = +2
Query: 5 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRE 169
F L + + E + T + D L+ YD P + +++N++++ +
Sbjct: 10 FYLAISWCNLLEVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNTMSVLTLDP 69
Query: 170 SESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER-LWRPDVVL 307
+E T+ ++ + W D+ L WN ++ TWL E LW PD +
Sbjct: 70 AEETINFSSEFILQWKDEFLFWNKSDYNI-TWLKLKESFLWTPDTTV 115
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 40.3 bits (90), Expect = 3e-04
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 128 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVV 304
VN+ L + H + E E T + + WID+ + W+A + + +S+ LW+P +
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDAKKENVTKLTISAHSLWQPALA 113
Query: 305 LLNA 316
L N+
Sbjct: 114 LYNS 117
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 39.9 bits (89), Expect = 4e-04
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 101 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSS 277
E P KI + L L + N+ E E + L M W D +L W+ ++ T + V+
Sbjct: 61 ELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAP 117
Query: 278 ERLWRPDVVLLN 313
E++W PD+VL N
Sbjct: 118 EKVWLPDIVLFN 129
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 39.9 bits (89), Expect = 4e-04
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 134 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 295
L +L+ ++E E V ++ +L W D RLSWN+ + T V E++W P
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNSSLYSNIPTVFVRQEKVWSP 133
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 39.9 bits (89), Expect = 4e-04
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 101 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSS 277
E P KI + L L + N+ E E + L M W D +L W+ ++ T + V+
Sbjct: 61 ELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAP 117
Query: 278 ERLWRPDVVLLN 313
E++W PD+VL N
Sbjct: 118 EKVWLPDIVLFN 129
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 39.9 bits (89), Expect = 4e-04
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 101 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSS 277
E P KI + L L + N+ E E + L M W D +L W+ ++ T + V+
Sbjct: 61 ELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAP 117
Query: 278 ERLWRPDVVLLN 313
E++W PD+VL N
Sbjct: 118 EKVWLPDIVLFN 129
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 39.5 bits (88), Expect = 5e-04
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +2
Query: 161 IRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 313
+ E + V I L++ WID+ L+W+ ++G S V + ++W+PDV++ N
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYN 120
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 39.5 bits (88), Expect = 5e-04
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Frame = +2
Query: 68 MIDSLLATYDRESPP---DSKIVVNLTLHLRHANIR---ESESTVRILADLQMNWIDKRL 229
+I L Y +E P +S N+T+ L I+ E++ + + ++ W D+ L
Sbjct: 27 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 86
Query: 230 SWNAGEWG-CSTWLVSSERLWRPDVVLLN 313
+WN ++G + V SE +W+PD+++ N
Sbjct: 87 TWNPSDFGNIKSLHVPSEMIWKPDLLVYN 115
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 39.5 bits (88), Expect = 5e-04
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Frame = +2
Query: 68 MIDSLLATYDRESPP---DSKIVVNLTLHLRHANIR---ESESTVRILADLQMNWIDKRL 229
+I L Y +E P +S N+T+ L I+ E++ + + ++ W D+ L
Sbjct: 27 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 86
Query: 230 SWNAGEWG-CSTWLVSSERLWRPDVVLLN 313
+WN ++G + V SE +W+PD+++ N
Sbjct: 87 TWNPSDFGNIKSLHVPSEMIWKPDLLVYN 115
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 39.5 bits (88), Expect = 5e-04
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Frame = +2
Query: 8 LLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRES 172
+L+ I + C+ + + + + LL Y+ P + V + L L+ ++ E
Sbjct: 9 ILSLVIIHSNLCDGSVAETKLFTDLLKGYNPLERPVQNSSQPLEVKIKLFLQQILDVDEK 68
Query: 173 ESTVRILADLQMNWIDKRLSWNAGEWGCSTWLV---SSERLWRPDVVLLNA 316
V + A L W D +L W ++G + SS+ +W+PDV+L N+
Sbjct: 69 NQIVSVNAWLSYTWFDHKLQWEPKKYGGIQDIRFPGSSDHIWKPDVLLYNS 119
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 39.5 bits (88), Expect = 5e-04
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +2
Query: 161 IRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 313
+ E + V I L++ WID+ L+W+ ++G S V + ++W+PDV++ N
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYN 120
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 39.5 bits (88), Expect = 5e-04
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Frame = +2
Query: 68 MIDSLLATYDRESPP---DSKIVVNLTLHLRHANIR---ESESTVRILADLQMNWIDKRL 229
+I L Y +E P +S N+T+ L I+ E++ + + ++ W D+ L
Sbjct: 11 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 70
Query: 230 SWNAGEWG-CSTWLVSSERLWRPDVVLLN 313
+WN ++G + V SE +W+PD+++ N
Sbjct: 71 TWNPSDFGNIKSLHVPSEMIWKPDLLVYN 99
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 39.5 bits (88), Expect = 5e-04
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 128 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVV 304
V + L++ H + E E T + L +W D+ L W ST ++S +LW+P +
Sbjct: 54 VAVYLNIAHVEKVDEHEQTALVHGHLMASWTDEYLKWERKATNISTLSIASSKLWQPALQ 113
Query: 305 LLNA 316
L N+
Sbjct: 114 LYNS 117
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 39.1 bits (87), Expect = 7e-04
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Frame = +2
Query: 68 MIDSLLATYDRESPP--DSKIVVNLTLHL---RHANIRESESTVRILADLQMNWIDKRLS 232
++ L YD P D + VN+ L L + ++ E + ++ Q W D +L
Sbjct: 28 LLKDLREGYDPVERPVADHRKPVNVKLRLILQQLVDVDERNQVITLVVWNQYTWNDYKLR 87
Query: 233 WNAGEWGCSTWL-VSSERLWRPDVVLLNA 316
W+ E+G T L + LW+PD++L N+
Sbjct: 88 WSPEEYGNITTLQIPHGTLWKPDILLFNS 116
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 39.1 bits (87), Expect = 7e-04
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +2
Query: 107 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSER 283
PP +I + L++ ++ + E E L D + +W D RLSW+ ++G + V +
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHIYVPRSK 137
Query: 284 LWRPDVVLLN 313
+W P+ +++
Sbjct: 138 VWIPETTIVD 147
>AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine
receptor protein 21 protein.
Length = 469
Score = 39.1 bits (87), Expect = 7e-04
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Frame = +2
Query: 80 LLATYDRESPPD--SKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLSWNAG 244
LL Y+ E P SK +N+T I + + +IL ++++W+D +L W+
Sbjct: 7 LLYDYNNEVRPSVHSKEPINVTFVFSLTQIIDVDERNQILTTNSWIRLHWVDYKLVWDPR 66
Query: 245 EWGCSTWL-VSSERLWRPDVVLLN 313
+ T + + S+++W+PD++L N
Sbjct: 67 LYQNVTRIHIPSDKIWKPDIILYN 90
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 38.7 bits (86), Expect = 9e-04
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Frame = +2
Query: 32 AAECENATSL----SLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA-NIRESESTVRI 190
A CEN +L S +++ + YDR P ++VN+T+ L ++E++
Sbjct: 57 ALNCENFRTLDNETSAILNDIFVGYDRRVLPFVQGPVLVNMTIVLGILIELKENQQLAAY 116
Query: 191 LADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 316
+ W D RLSW+ ++ G +V +W P + + N+
Sbjct: 117 VISHTQRWYDGRLSWDPSKYRGQREVIVPQTMVWIPKLFVYNS 159
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 38.3 bits (85), Expect = 0.001
Identities = 17/69 (24%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Frame = +2
Query: 122 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL---VSSERLW 289
+VV++ ++L+ ++ E + ++A ++ W D +L W+ E+G + ++ +W
Sbjct: 53 LVVSVKIYLQQILDVDEKNQVITLVAWIEYQWTDYKLKWDPSEYGGIKDIRIPGNANAIW 112
Query: 290 RPDVVLLNA 316
+PDV+L N+
Sbjct: 113 KPDVLLYNS 121
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 38.3 bits (85), Expect = 0.001
Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Frame = +2
Query: 23 IASAAECENATSLSLMIDSLLATYDRE-SPPDSKIVVNLTLH-LRHANIRESESTVRILA 196
+ + A E + + +L+ TYD + P D +V +T + ++ +++ T++
Sbjct: 17 LTAVAFLETSNTETLLQQLFNQTYDVDMKPSDDLTMVTITPNTFILLSMDQTQETIQYSE 76
Query: 197 DLQMNWIDKRLSWNAGEWGCST-WL-VSSERLWRPDVVLLN 313
+ + W D L WN W+ +S+ R W PDV+ N
Sbjct: 77 EFLLRWYDPILHWNQSAVSYENDWIKISASRAWIPDVIFTN 117
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 200 LQMNWIDKRLSWNAGEWGCSTW-LVSSERLWRPDV 301
L+++W D+RL WN EW L S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 200 LQMNWIDKRLSWNAGEWGCSTW-LVSSERLWRPDV 301
L+++W D+RL WN EW L S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 37.5 bits (83), Expect = 0.002
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +2
Query: 122 IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRP 295
++V + L L+ ++ E V + A L+ +W+D L W ++G T L +LW P
Sbjct: 51 VMVKMGLVLQQIVDVDEKNQVVDVNAWLKFSWVDYSLKWKPEDYGGVTDLRFRKGQLWTP 110
Query: 296 DVVLLNA 316
DV++ N+
Sbjct: 111 DVLMYNS 117
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 37.1 bits (82), Expect = 0.003
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 122 IVVNLTLHL-RHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRP 295
++V + L L N+ E + + L + W D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 296 DVVLLN 313
D+VL N
Sbjct: 116 DIVLFN 121
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 37.1 bits (82), Expect = 0.003
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 134 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 295
L +L+ ++E V ++ +L W D RLSWN + ST E++W P
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWNISLYSNVSTIFARQEKVWSP 133
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 37.1 bits (82), Expect = 0.003
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 122 IVVNLTLHL-RHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRP 295
++V + L L N+ E + + L + W D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 296 DVVLLN 313
D+VL N
Sbjct: 116 DIVLFN 121
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 37.1 bits (82), Expect = 0.003
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 122 IVVNLTLHL-RHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRP 295
++V + L L N+ E + + L + W D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 296 DVVLLN 313
D+VL N
Sbjct: 116 DIVLFN 121
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 37.1 bits (82), Expect = 0.003
Identities = 15/65 (23%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 125 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDV 301
+V++ H+ H +I + E T+ + + M W D+ L W+ ++ + V ++W+P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 302 VLLNA 316
+ N+
Sbjct: 134 KVSNS 138
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 37.1 bits (82), Expect = 0.003
Identities = 15/65 (23%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 125 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDV 301
+V++ H+ H +I + E T+ + + M W D+ L W+ ++ + V ++W+P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 302 VLLNA 316
+ N+
Sbjct: 134 KVSNS 138
>Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical
protein R01E6.4 protein.
Length = 573
Score = 36.7 bits (81), Expect = 0.004
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 146 LRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 313
+R ++ E + L+M W D +L+W ++ G T + S+ +W PD+VL N
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYN 128
>AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-12 protein.
Length = 573
Score = 36.7 bits (81), Expect = 0.004
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 146 LRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 313
+R ++ E + L+M W D +L+W ++ G T + S+ +W PD+VL N
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYN 128
>Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical
protein Y57G11C.49 protein.
Length = 438
Score = 36.3 bits (80), Expect = 0.005
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Frame = +2
Query: 38 ECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLH-LRHANIRESESTVRILADL 202
E + T + D L+ YD P + +N++++ + + +E T+ +
Sbjct: 21 EIDGITVSEQLKDVLMEGYDSSIRPVINERDTLFINISINSMSFLTLDPAEETINFSGEF 80
Query: 203 QMNWIDKRLSWNAGEWGCSTWLVSSER-LWRPDVVL 307
+ W D+ L WN ++ TWL E LW PD +
Sbjct: 81 ILQWKDEFLFWNKSDYNI-TWLKLKESFLWTPDTTV 115
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 36.3 bits (80), Expect = 0.005
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +2
Query: 74 DSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW- 250
+SL+ S P ++ +L L N+ E ++ M W D ++ W+ E+
Sbjct: 38 NSLIRPVLNASSPPIEVFFSLAFVLL-INVDEKNQIMQTNVWPTMKWNDYQMQWDPREFD 96
Query: 251 GCSTWLVSSERLWRPDVVLLN 313
G T V +++W PD+VL N
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFN 117
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 36.3 bits (80), Expect = 0.005
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Frame = +2
Query: 14 TCAIASAAECE-NATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE-SESTVR 187
T ++ A CE N+ ++ LL YD+ P + V +++ L +I SE +
Sbjct: 20 TESLVDPAHCEYNSNHRKSILTDLLQDYDKTMVPSNNSV-QVSVELTVQDISSISEISSS 78
Query: 188 ILADLQMN--WIDKRLSWNAGEWGCSTWLVS--SERLWRPDVVLLNA 316
+AD+ + W D RL + + L S SERLW P+V +N+
Sbjct: 79 FIADVWFSQVWYDPRLEYRNISCKTNLSLDSYVSERLWTPNVCFVNS 125
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 36.3 bits (80), Expect = 0.005
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +2
Query: 125 VVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 292
V+N+T+ + N + E ++IL +W D L+W+ EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 293 PDVVLLN 313
PD + N
Sbjct: 120 PDGYIFN 126
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 36.3 bits (80), Expect = 0.005
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +2
Query: 74 DSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW- 250
+SL+ S P ++ +L L N+ E ++ M W D ++ W+ E+
Sbjct: 38 NSLIRPVLNASSPPIEVFFSLAFVLL-INVDEKNQIMQTNVWPTMKWNDYQMQWDPREFD 96
Query: 251 GCSTWLVSSERLWRPDVVLLN 313
G T V +++W PD+VL N
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFN 117
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 36.3 bits (80), Expect = 0.005
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +2
Query: 125 VVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 292
V+N+T+ + N + E ++IL +W D L+W+ EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 293 PDVVLLN 313
PD + N
Sbjct: 120 PDGYIFN 126
>Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical
protein K03B8.9 protein.
Length = 564
Score = 35.5 bits (78), Expect = 0.008
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 119 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 295
K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++ LW P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 296 DVVLLNA 316
D L N+
Sbjct: 138 DTYLYNS 144
>U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit precursor protein.
Length = 564
Score = 35.5 bits (78), Expect = 0.008
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 119 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 295
K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++ LW P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 296 DVVLLNA 316
D L N+
Sbjct: 138 DTYLYNS 144
>U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 564
Score = 35.5 bits (78), Expect = 0.008
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 119 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 295
K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++ LW P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 296 DVVLLNA 316
D L N+
Sbjct: 138 DTYLYNS 144
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 35.1 bits (77), Expect = 0.011
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 140 LHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 292
LH+ H + I++ + +++ W+D+RL WN + G T+ + +WR
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWNPSNYSGIRTFSTTRHEMWR 114
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 34.7 bits (76), Expect = 0.015
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = +2
Query: 44 ENATSLS-LMIDSLLATYDRESPPDSKIVVNLT-LHLRHANIRESESTVRILADLQMNWI 217
E+A L+ L I +A+ + +N L+H + E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 218 DKRLSWNAGEWGCSTWLVSS-ERLWRP 295
D RL WN W + +V S +W P
Sbjct: 93 DDRLMWNQDTWKKNKLVVHSFHHIWVP 119
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 34.3 bits (75), Expect = 0.019
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 200 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNA 316
L+M+W D L+W+ E+G + +W+PDV+L N+
Sbjct: 77 LRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNS 116
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 34.3 bits (75), Expect = 0.019
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +2
Query: 92 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWL 268
YD ++P + L L+ + E V ++ ++ W D RLSWNA + T+
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNASLYDDIDTFY 122
Query: 269 VSSERLWRPDVVLLNA 316
+W P + A
Sbjct: 123 TRQSNVWSPTLSAFGA 138
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 34.3 bits (75), Expect = 0.019
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 200 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNA 316
L+M+W D L+W+ E+G + +W+PDV+L N+
Sbjct: 77 LRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNS 116
>U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine
receptor protein 5 protein.
Length = 548
Score = 33.9 bits (74), Expect = 0.025
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 128 VNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDV 301
VNL++ L ++ E ++ + + +W D+ L WN ++G + +V ++W PD
Sbjct: 133 VNLSMSLYQILDVDEHMQSIEVNVWMVQHWYDEFLDWNPVDYGMINRTIVPYHQIWIPDT 192
Query: 302 VLLNA 316
L N+
Sbjct: 193 YLYNS 197
>AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform b protein.
Length = 513
Score = 33.9 bits (74), Expect = 0.025
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
Frame = +2
Query: 5 FLLTCAIASAAECENATSLSLMIDSLL----ATYDRESPP-----DSKIVVNLTLHLRH- 154
FLL + E + + + +D+LL YD +SPP + VV L +++
Sbjct: 8 FLLLYRNSPKVEASRSEPVPIYLDNLLNAGRQVYDNQSPPVQHDKEEVTVVELAMYIEGM 67
Query: 155 ANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNA 316
++ R ++ Q W D RL+ N ++W+PDV NA
Sbjct: 68 SSFRTQTMDFQLDVYFQQFWRDPRLAHNETRRVLVKDKAVLHKMWKPDVYFANA 121
>AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform a protein.
Length = 546
Score = 33.9 bits (74), Expect = 0.025
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
Frame = +2
Query: 5 FLLTCAIASAAECENATSLSLMIDSLL----ATYDRESPP-----DSKIVVNLTLHLRH- 154
FLL + E + + + +D+LL YD +SPP + VV L +++
Sbjct: 8 FLLLYRNSPKVEASRSEPVPIYLDNLLNAGRQVYDNQSPPVQHDKEEVTVVELAMYIEGM 67
Query: 155 ANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNA 316
++ R ++ Q W D RL+ N ++W+PDV NA
Sbjct: 68 SSFRTQTMDFQLDVYFQQFWRDPRLAHNETRRVLVKDKAVLHKMWKPDVYFANA 121
>AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical
protein C04C3.2 protein.
Length = 464
Score = 33.5 bits (73), Expect = 0.034
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Frame = +2
Query: 68 MIDSLLATYDRESPPDSK----IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLS 232
+I+++ YD+ P ++ ++V++T+ L +RE++ + W D +L+
Sbjct: 44 LIETIQRRYDKRVRPFAESNRPVIVHMTIVLGILTEVRENQQVASFVISHVQKWRDPKLA 103
Query: 233 WNAGEWGCSTWLVSSERL-WRPDVVLLNA 316
WN + T +V L W P + + N+
Sbjct: 104 WNPADHSGLTQVVMPRSLVWVPKLFIYNS 132
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 33.1 bits (72), Expect = 0.045
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Frame = +2
Query: 38 ECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE-SESTVRILADLQMN- 211
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 212 -WIDKRLSWNAGEWGCSTWL---VSS--ERLWRPDVVLLNA 316
W D RLS+ C+T + VS +++W PD ++N+
Sbjct: 68 IWQDPRLSFKHLN-VCATNITLKVSDFRKKIWTPDTCIINS 107
>AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine
receptor (62.5 kD)(acr-23) protein.
Length = 545
Score = 33.1 bits (72), Expect = 0.045
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 116 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVS-SERLW 289
S I V L+L L + E + + + A W+D+ L W+ E+ T +++ + +W
Sbjct: 50 SPINVTLSLQLYQIIQVNEPQQYLLLNAWAVERWVDQMLGWDPSEFDNETEIMARHDDIW 109
Query: 290 RPDVVLLNA 316
PD L N+
Sbjct: 110 LPDTTLYNS 118
>AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholine
receptor protein 23 protein.
Length = 545
Score = 33.1 bits (72), Expect = 0.045
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 116 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVS-SERLW 289
S I V L+L L + E + + + A W+D+ L W+ E+ T +++ + +W
Sbjct: 50 SPINVTLSLQLYQIIQVNEPQQYLLLNAWAVERWVDQMLGWDPSEFDNETEIMARHDDIW 109
Query: 290 RPDVVLLNA 316
PD L N+
Sbjct: 110 LPDTTLYNS 118
>Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical
protein T01H10.7 protein.
Length = 399
Score = 32.7 bits (71), Expect = 0.059
Identities = 17/73 (23%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +2
Query: 92 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL- 268
Y+ +P V+L +L+ + E E V ++ ++ W D R++W++ +G L
Sbjct: 64 YNPLAPKRFNYTVSL-YYLKLVEVIEPEEKVSVVLEMAEYWYDPRIAWDSSLYGDIKMLH 122
Query: 269 VSSERLWRPDVVL 307
+ +++W P + L
Sbjct: 123 MRQDKVWSPTLSL 135
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 32.7 bits (71), Expect = 0.059
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = +2
Query: 158 NIRESESTVRILADLQMNWIDKRLSWNAGEWG------CSTWLVSSERLWRPDVVLLNA 316
++ E + ILA + +W D +L+W+ +G S +S +LWRPDV+L N+
Sbjct: 59 DVDEKNQVMSILAYMDYHWNDYKLTWDPKLFGGIRDVRFSGDDDASFKLWRPDVLLFNS 117
>AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ion
channel protein 5 protein.
Length = 340
Score = 32.7 bits (71), Expect = 0.059
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = +2
Query: 89 TYD-RESPPDSKIVVNLTLH-LRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCS- 259
TYD P D+ V +T + ++ +++ T+ + + W D L WN + +
Sbjct: 39 TYDVNVKPSDTLTTVTITPNTFLLLSMDQTQETILFSQEFLLKWYDPILHWNRTLFDYNR 98
Query: 260 TWL-VSSERLWRPDVV 304
W+ +S R+W PDV+
Sbjct: 99 EWIKISVSRVWVPDVI 114
>Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical
protein T09A5.3 protein.
Length = 538
Score = 32.3 bits (70), Expect = 0.078
Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 110 PDSKIVVNLTLHLRHANIRESE-STVRILADLQMNWIDKRLSWNAGEWG--CSTWLVSSE 280
P + V + + ++ + +++ + + A L+ W D RL WN ++ S +
Sbjct: 52 PKKALTVTMKVFIQQVLLVDAKHQMIEVNAWLKYIWTDFRLRWNPLDYENITSVRFQGED 111
Query: 281 RLWRPDVVLLN 313
++W+PD++L N
Sbjct: 112 QIWQPDILLYN 122
>AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-7 protein.
Length = 538
Score = 32.3 bits (70), Expect = 0.078
Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 110 PDSKIVVNLTLHLRHANIRESE-STVRILADLQMNWIDKRLSWNAGEWG--CSTWLVSSE 280
P + V + + ++ + +++ + + A L+ W D RL WN ++ S +
Sbjct: 52 PKKALTVTMKVFIQQVLLVDAKHQMIEVNAWLKYIWTDFRLRWNPLDYENITSVRFQGED 111
Query: 281 RLWRPDVVLLN 313
++W+PD++L N
Sbjct: 112 QIWQPDILLYN 122
>AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ion
channel protein 12 protein.
Length = 425
Score = 31.9 bits (69), Expect = 0.10
Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = +2
Query: 161 IRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 313
+ E +++L +W D L W+ EW G + +W PD + N
Sbjct: 68 VNEQNEQIKLLIWFPQSWKDDYLVWDPDEWDGIEKITIPKSMVWLPDGYIFN 119
>Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical
protein B0491.4 protein.
Length = 454
Score = 31.1 bits (67), Expect = 0.18
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 161 IRESESTVRILADLQMNWIDKRLSWN-AGEWGC--STWLVSSERLWRPDVV 304
++ S + D+ +NW D+R+ W+ GE+ ++ +S +W P V+
Sbjct: 83 VKGSSYQFNVFGDIYLNWKDERMKWDKKGEFENYEHLYIFNSSAIWTPHVI 133
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 31.1 bits (67), Expect = 0.18
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +2
Query: 182 VRILADLQMNWIDKRLSWNAGEWGCST---WLVSSERLWRPDVVLLNA 316
+ + A L+ W+D RL W+ ++ T + ++WRPD++L N+
Sbjct: 12 IEVNAWLKYVWMDYRLQWDPLQYDNITSIRFAGGENQIWRPDILLYNS 59
>AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical
protein F09G2.5 protein.
Length = 563
Score = 31.1 bits (67), Expect = 0.18
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 200 LQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNA 316
L M W D+RL+ N T + ++R+W PD+ +N+
Sbjct: 175 LAMGWFDRRLAHNCTHPILVTSKLIADRIWYPDLYFVNS 213
>Z83120-8|CAE46678.2| 511|Caenorhabditis elegans Hypothetical
protein R06A4.10b protein.
Length = 511
Score = 29.9 bits (64), Expect = 0.41
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 116 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER-LW 289
S I V+ ++ L ++ E + + + A + W D+ L W+ ++G T ++ +W
Sbjct: 5 SPIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFGNVTEIMLPHHFIW 64
Query: 290 RPDVVLLNA 316
PD L N+
Sbjct: 65 LPDTTLYNS 73
>Z83120-7|CAB51466.2| 514|Caenorhabditis elegans Hypothetical
protein R06A4.10a protein.
Length = 514
Score = 29.9 bits (64), Expect = 0.41
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 116 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER-LW 289
S I V+ ++ L ++ E + + + A + W D+ L W+ ++G T ++ +W
Sbjct: 5 SPIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFGNVTEIMLPHHFIW 64
Query: 290 RPDVVLLNA 316
PD L N+
Sbjct: 65 LPDTTLYNS 73
>AY523515-1|AAR98637.1| 553|Caenorhabditis elegans acetylcholine
receptor 20 (63.9kD) alternative variant a protein.
Length = 553
Score = 29.9 bits (64), Expect = 0.41
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 116 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER-LW 289
S I V+ ++ L ++ E + + + A + W D+ L W+ ++G T ++ +W
Sbjct: 47 SPIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFGNVTEIMLPHHFIW 106
Query: 290 RPDVVLLNA 316
PD L N+
Sbjct: 107 LPDTTLYNS 115
>Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.3 protein.
Length = 399
Score = 29.1 bits (62), Expect = 0.73
Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 134 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 295
L L+ + E + V ++ ++ W D RL+WN ++ ++ +W P
Sbjct: 78 LLFSLKLVEVTEPQEKVSVVMEVMEYWFDARLTWNKEDYDDIASIYTRQANVWSP 132
>Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical
protein C15A7.1 protein.
Length = 403
Score = 28.7 bits (61), Expect = 0.96
Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Frame = +2
Query: 74 DSLLATYDRESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWNAGEW 250
+ +L D P + + + L L H + + E + + ++ W D+RL W+ +
Sbjct: 39 EDVLGPLDGSMPSELPVFIGAQLKLDHISRVDEKTGFLTLALTVKFMWSDERLQWDPSHY 98
Query: 251 GCST---------WLVSSERLWRPDVVLLN 313
T WL ++W+P + + N
Sbjct: 99 SGFTRTRLEFVDFWLY---QIWKPRIYMTN 125
>Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical
protein F11A5.10 protein.
Length = 461
Score = 28.3 bits (60), Expect = 1.3
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 7/108 (6%)
Frame = +2
Query: 11 LTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRH-ANIRESE 175
LT I E + ++ + YD R PP +VV++ + LR + I
Sbjct: 48 LTSPIHIPIEQPQTSDSKILAHLFTSGYDFRVRPPTDNGGPVVVSVNMLLRTISKIDVVN 107
Query: 176 STVRILADLQMNWIDKRLSWNAGEWGCSTWLVSS--ERLWRPDVVLLN 313
L+ +WIDKRLS+ G +++ + ++W PD N
Sbjct: 108 MEYSAQLTLRESWIDKRLSYGVKGDGQPDFVILTVGHQIWMPDTFFPN 155
>Z81125-6|CAI79225.1| 234|Caenorhabditis elegans Hypothetical
protein T22A3.3b protein.
Length = 234
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 317 PRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFEDLPVS-ARWTRTHEC 159
P++A+P + S + + + +P NS V ++S +P+S W R H C
Sbjct: 116 PKVAMPSELSYANVKRSSGYVDYMPTTYNSNVTSNSSAASVPMSPGTWVRCHYC 169
>Z81125-5|CAB03381.2| 398|Caenorhabditis elegans Hypothetical
protein T22A3.3a protein.
Length = 398
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 317 PRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFEDLPVS-ARWTRTHEC 159
P++A+P + S + + + +P NS V ++S +P+S W R H C
Sbjct: 280 PKVAMPSELSYANVKRSSGYVDYMPTTYNSNVTSNSSAASVPMSPGTWVRCHYC 333
>U14524-1|AAA50785.1| 461|Caenorhabditis elegans
avermectin-sensitive glutamate-gated chloride channel
GluCl alpha protein.
Length = 461
Score = 28.3 bits (60), Expect = 1.3
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 7/108 (6%)
Frame = +2
Query: 11 LTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRH-ANIRESE 175
LT I E + ++ + YD R PP +VV++ + LR + I
Sbjct: 48 LTSPIHIPIEQPQTSDSKILAHLFTSGYDFRVRPPTDNGGPVVVSVNMLLRTISKIDVVN 107
Query: 176 STVRILADLQMNWIDKRLSWNAGEWGCSTWLVSS--ERLWRPDVVLLN 313
L+ +WIDKRLS+ G +++ + ++W PD N
Sbjct: 108 MEYSAQLTLRESWIDKRLSYGVKGDGQPDFVILTVGHQIWMPDTFFPN 155
>AF408760-1|AAO27839.1| 318|Caenorhabditis elegans unknown protein
protein.
Length = 318
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 317 PRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFEDLPVS-ARWTRTHEC 159
P++A+P + S + + + +P NS V ++S +P+S W R H C
Sbjct: 200 PKVAMPSELSYANVKRSSGYVDYMPTTYNSNVTSNSSAASVPMSPGTWVRCHYC 253
>Z93397-1|CAB07719.3| 550|Caenorhabditis elegans Hypothetical
protein ZC482.1 protein.
Length = 550
Score = 27.9 bits (59), Expect = 1.7
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Frame = +2
Query: 53 TSLSLMIDSLLATYD-RESPPDSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWID 220
++ S ++ LL YD R P + LT+ + A+ I E + + L W D
Sbjct: 52 SNASSLLSDLLLDYDIRLRPGFGGDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTD 111
Query: 221 KRLSWNAGEWGCSTWLVS---SERLWRPDVVLLN 313
+RL W + E +S S+ +W PD L N
Sbjct: 112 ERLRW-SNEIPIDEMTLSGEFSQNIWVPDTFLAN 144
>AF498370-1|AAN65376.1| 550|Caenorhabditis elegans GABA-A receptor
subunit protein.
Length = 550
Score = 27.9 bits (59), Expect = 1.7
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Frame = +2
Query: 53 TSLSLMIDSLLATYD-RESPPDSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWID 220
++ S ++ LL YD R P + LT+ + A+ I E + + L W D
Sbjct: 52 SNASSLLSDLLLDYDIRLRPGFGGDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTD 111
Query: 221 KRLSWNAGEWGCSTWLVS---SERLWRPDVVLLN 313
+RL W + E +S S+ +W PD L N
Sbjct: 112 ERLRW-SNEIPIDEMTLSGEFSQNIWVPDTFLAN 144
>Z83104-2|CAB54203.1| 563|Caenorhabditis elegans Hypothetical
protein F09B12.1b protein.
Length = 563
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 52 NITVPHDRLAPRNVRSGVSPRLQNRSQPDP 141
N+ P D+L + SGV +LQNR P P
Sbjct: 114 NVPPPDDQL-DWQIASGVPVQLQNRGVPQP 142
>Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical
protein F09B12.1a protein.
Length = 573
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 52 NITVPHDRLAPRNVRSGVSPRLQNRSQPDP 141
N+ P D+L + SGV +LQNR P P
Sbjct: 124 NVPPPDDQL-DWQIASGVPVQLQNRGVPQP 152
>EF472000-1|ABQ96385.1| 1142|Caenorhabditis elegans SMG-3 protein.
Length = 1142
Score = 25.8 bits (54), Expect = 6.8
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 146 LRHANIRESESTVRILADL--QMNWIDKRLSWNAGEWGCSTWLVSSERL 286
+RH + +ESTV + ++ W D ++ A + STWL+ E L
Sbjct: 652 IRHIILDINESTVDVFLKCLRRLEWYDPEVADYAIRYLSSTWLLPIENL 700
>AF101309-5|ABD94097.1| 543|Caenorhabditis elegans Hypothetical
protein H24G06.1e protein.
Length = 543
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 278 PRTPAKCCSPIPLRSNSVVCRSNSFEDLPVSARWTR 171
PRT ++ S P RSNS + + + E P S +R
Sbjct: 36 PRTTSRVLSTAPRRSNSNLFAATNLEVPPTSTNLSR 71
>AC084197-22|AAK68590.2| 1142|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 3 protein.
Length = 1142
Score = 25.8 bits (54), Expect = 6.8
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 146 LRHANIRESESTVRILADL--QMNWIDKRLSWNAGEWGCSTWLVSSERL 286
+RH + +ESTV + ++ W D ++ A + STWL+ E L
Sbjct: 652 IRHIILDINESTVDVFLKCLRRLEWYDPEVADYAIRYLSSTWLLPIENL 700
>U14635-12|AAC46655.1| 159|Caenorhabditis elegans Phosphodiesterase
delta-like protein1 protein.
Length = 159
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 137 TLHLRHANIRESESTVRILADLQMNWIDKR 226
T RH + + SE ILA ++NW++ R
Sbjct: 3 TTATRHQDSKLSEKAESILAGFKLNWMNLR 32
>U00063-5|AAK18963.1| 182|Caenorhabditis elegans Hypothetical
protein F56C9.8 protein.
Length = 182
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -2
Query: 295 RPPQAFRGHQPSAAAPFPCVPTQSF 221
+P Q +R QP++ P+ PTQ++
Sbjct: 68 QPQQQYREQQPASDFPYNPAPTQNY 92
>AC006677-8|AAF39943.1| 278|Caenorhabditis elegans Dehydrogenases,
short chain protein15 protein.
Length = 278
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 190 TGRSSNELDRQTTELERRGMGLQHLAGVLGTLVEA 294
TGRSS ++ E+ + G ++ VLG L E+
Sbjct: 36 TGRSSEKIQETVNEIHKNGGSSDNINIVLGDLNES 70
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,708,085
Number of Sequences: 27780
Number of extensions: 154992
Number of successful extensions: 684
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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