Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120112.Seq
         (843 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA ...    33   0.34 
AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid de...    33   0.34 
Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical pr...    32   0.44 
AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA ...    32   0.44 
AC006810-5|AAF59629.2|  516|Caenorhabditis elegans Cytochrome p4...    29   3.1  
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca...    28   7.2  
Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical pr...    28   9.5  
AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA...    28   9.5  

>AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-7 protein.
          Length = 338

 Score = 32.7 bits (71), Expect = 0.34
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 655 DLKSLITDTCLIHSRDLYNPFLYIICFVKPTI 750
           DL  L +D  L+  R  Y P + + CF+ PTI
Sbjct: 177 DLSDLFSDPVLVFQRKHYFPLVILFCFILPTI 208


>AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid
           desaturase protein 7 protein.
          Length = 338

 Score = 32.7 bits (71), Expect = 0.34
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 655 DLKSLITDTCLIHSRDLYNPFLYIICFVKPTI 750
           DL  L +D  L+  R  Y P + + CF+ PTI
Sbjct: 177 DLSDLFSDPVLVFQRKHYFPLVILFCFILPTI 208


>Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical
           protein VZK822L.1 protein.
          Length = 339

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 655 DLKSLITDTCLIHSRDLYNPFLYIICFVKPTI 750
           D+  L++D  L+  R  Y P + + CF+ PTI
Sbjct: 178 DMSDLLSDPVLVFQRKHYFPLVILCCFILPTI 209


>AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-6 protein.
          Length = 339

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 655 DLKSLITDTCLIHSRDLYNPFLYIICFVKPTI 750
           D+  L++D  L+  R  Y P + + CF+ PTI
Sbjct: 178 DMSDLLSDPVLVFQRKHYFPLVILCCFILPTI 209


>AC006810-5|AAF59629.2|  516|Caenorhabditis elegans Cytochrome p450
           family protein 32B1 protein.
          Length = 516

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/45 (28%), Positives = 27/45 (60%)
 Frame = +2

Query: 254 IVALLIPSILKLFRHIIEKGEASLEERLHLRETSRKEFVKVRGKP 388
           ++A  +  +L  F ++I + +  + + LH+R+   +EF K+RG P
Sbjct: 1   MLAAALVLLLTYFAYLIFRQKDDILQFLHVRKICTREFKKLRGPP 45


>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
           protein 4 protein.
          Length = 2325

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +3

Query: 120 IMASHSLDTIDLSEIGLTREVLTGVGDYMTGQRP 221
           ++ S  LD  D S+  +  EV TGVG Y   +RP
Sbjct: 109 MVRSKYLDDFDASDESVQYEVTTGVGRYFVLRRP 142


>Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical
           protein W06D12.3 protein.
          Length = 333

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +1

Query: 655 DLKSLITDTCLIHSRDLYNPFLYIICFVKPT 747
           DL  L  D  L+  R  Y P + I CF  PT
Sbjct: 169 DLSDLYEDPVLMFQRKNYLPLVGIFCFALPT 199


>AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA
           fatty acid desaturaseFAT-5 protein.
          Length = 333

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +1

Query: 655 DLKSLITDTCLIHSRDLYNPFLYIICFVKPT 747
           DL  L  D  L+  R  Y P + I CF  PT
Sbjct: 169 DLSDLYEDPVLMFQRKNYLPLVGIFCFALPT 199


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,841,084
Number of Sequences: 27780
Number of extensions: 428910
Number of successful extensions: 1058
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)