Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120072.Seq
(723 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 62 4e-10
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 44 8e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 39 0.004
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 38 0.010
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 37 0.017
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 36 0.022
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 36 0.022
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 36 0.022
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 36 0.022
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 36 0.022
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 36 0.029
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 36 0.029
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 36 0.029
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 36 0.029
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 36 0.039
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 35 0.051
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 35 0.051
AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical ... 35 0.051
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 35 0.068
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 35 0.068
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 35 0.068
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 35 0.068
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.36
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.36
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z78545-3|CAB01767.1| 306|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 31 0.83
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 31 1.1
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 31 1.1
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 31 1.1
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 31 1.1
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 31 1.1
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 30 1.9
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF025462-2|AAN72422.1| 1075|Caenorhabditis elegans Phospholipase... 29 3.4
AF025462-1|AAN72423.1| 1068|Caenorhabditis elegans Phospholipase... 29 3.4
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 29 4.4
U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding p... 29 4.4
U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding p... 29 4.4
U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical pr... 28 7.8
U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical pr... 28 7.8
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 28 7.8
AL032646-11|CAE46682.1| 193|Caenorhabditis elegans Hypothetical... 28 7.8
AL032646-10|CAA21681.1| 725|Caenorhabditis elegans Hypothetical... 28 7.8
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 62.1 bits (144), Expect = 4e-10
Identities = 29/66 (43%), Positives = 44/66 (66%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILN 698
E ++ DL G V ++++A++K TG KGFA+V F+ R DAA+AI LN H++L
Sbjct: 189 EDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELNDIRMYHMVLK 248
Query: 699 VEWSKP 716
VEW++P
Sbjct: 249 VEWTRP 254
Score = 51.6 bits (118), Expect = 6e-07
Identities = 26/64 (40%), Positives = 35/64 (54%)
Frame = +2
Query: 38 DNKKVKIVRTYKIEKCVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSK 217
D + K+V +K+ V K +A RK W KFG + GP ATT VAE+V MQF ++
Sbjct: 39 DGVRWKVVTQFKVINKRVPKVVADRKKWVKFGSCKGEPAGPQVATTYVAEEVDMQFTRNR 98
Query: 218 EESQ 229
Q
Sbjct: 99 AGEQ 102
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 44.4 bits (100), Expect = 8e-05
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILN 698
E D+ L K +G V ++ + +K TG CKGFA V F F A A +L+G+ + +++
Sbjct: 292 EDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSALDGYVFKGRMMH 351
Query: 699 V 701
+
Sbjct: 352 I 352
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/64 (29%), Positives = 35/64 (54%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILN 698
E +I + G V+ + + ++ TG +GFA+V F A A +A++ LNG ++ L
Sbjct: 19 EEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQLNGVAFNGRNLR 78
Query: 699 VEWS 710
V ++
Sbjct: 79 VNYA 82
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGH 674
E ++ + FG V ++ +A+ + TG+ KG+AYV F +A A A +S+NG+
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVAEIAAESMNGY 96
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILN 698
E D+ + +G V + L ++K TG KGFA++ +K + A+ + NG ++
Sbjct: 51 EGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNFNGISLHKRMIR 110
Query: 699 VE 704
V+
Sbjct: 111 VD 112
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILN 698
E ++ + G ++ + + ++ TG +GFA++ F A +A++ +NG ++ L
Sbjct: 18 EEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQMNGAEFNGRPLR 77
Query: 699 V 701
V
Sbjct: 78 V 78
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 36.3 bits (80), Expect = 0.022
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 552 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSK 713
GPV + + ++ +T G+AYV+F+ ADA +A+ ++N + + WS+
Sbjct: 56 GPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQ 109
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 528 IDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 671
I D FG + +A ++ G KG+ +VHF+ A AIQ +NG
Sbjct: 136 IYDTFSLFGNILSCKVAIDED-GFSKGYGFVHFETEEAAQNAIQKVNG 182
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 36.3 bits (80), Expect = 0.022
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 603 KGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKPPQ 722
K +A++HF R D KA++ NG + ++ +KPPQ
Sbjct: 410 KDYAFIHFNERDDCLKAMEEWNGKELEGTVVEASLAKPPQ 449
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +3
Query: 507 HFAVEADIDDLVKGF---GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGH 674
H + D LV F G + L L + +G +G+A+V + + DAA A ++ +GH
Sbjct: 206 HIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTYDGH 264
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 36.3 bits (80), Expect = 0.022
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +3
Query: 549 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS 710
FG V + + ++ +T KG+ +V + R DA +AI +NG + W+
Sbjct: 155 FGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWA 208
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +3
Query: 549 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSK 713
FGP++ E T +G+A+V F+ + AA+AI +N I+ W K
Sbjct: 278 FGPIN------EVRTFKIQGYAFVKFETKESAARAIVQMNNADIGGQIVRCSWGK 326
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 36.3 bits (80), Expect = 0.022
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 552 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSK 713
GPV + + ++ +T G+AYV+F+ ADA +A+ ++N + + WS+
Sbjct: 56 GPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQ 109
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 36.3 bits (80), Expect = 0.022
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 552 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSK 713
GPV + + ++ +T G+AYV+F+ ADA +A+ ++N + + WS+
Sbjct: 56 GPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQ 109
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 528 IDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 671
I D FG + +A ++ G KG+ +VHF+ A AIQ +NG
Sbjct: 136 IYDTFSLFGNILSCKVAIDED-GFSKGYGFVHFETEEAAQNAIQKVNG 182
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 549 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKPPQ 722
FG V + + + +G +GF +V F DAA AI ++N + V +++PP+
Sbjct: 34 FGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNMNESELFGKTIRVNFARPPK 91
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 35.9 bits (79), Expect = 0.029
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 549 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 671
FGP+ + ++ + +TGH K FA+V ++ A A +S+NG
Sbjct: 125 FGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNG 165
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLN 668
E D+ + + FG + K LA+ + +GF Y+ F ++AI +N
Sbjct: 220 ETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 35.9 bits (79), Expect = 0.029
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 549 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 671
FGP+ + ++ + +TGH K FA+V ++ A A +S+NG
Sbjct: 125 FGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNG 165
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLN 668
E D+ + + FG + K LA+ + +GF Y+ F ++AI +N
Sbjct: 220 ETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 35.9 bits (79), Expect = 0.029
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 549 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 671
FGP+ + ++ + +TGH K FA+V ++ A A +S+NG
Sbjct: 125 FGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNG 165
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLN 668
E D+ + + FG + K LA+ + +GF Y+ F ++AI +N
Sbjct: 220 ETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 35.5 bits (78), Expect = 0.039
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILN 698
E D+ + G V + + ++ TG +GFA+V F A A +A+ NG ++ L
Sbjct: 17 EDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQFNGVDFNGRALR 76
Query: 699 V 701
V
Sbjct: 77 V 77
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 35.1 bits (77), Expect = 0.051
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 528 IDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 665
I + + FG + + K K +GH KG A+VHF +A+ I+ +
Sbjct: 279 IKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASNCIEGV 324
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 35.1 bits (77), Expect = 0.051
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 567 LYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNV 701
++L ++ +G KGFAYV F+ AI LNG + + +L V
Sbjct: 41 IHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKV 85
>AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical
protein H24K24.4 protein.
Length = 603
Score = 35.1 bits (77), Expect = 0.051
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 579 KEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVE 704
K K H +AYV F+ DA KAI ++G+ Y IL+ +
Sbjct: 55 KSKKVRHMSDYAYVTFETPEDAQKAINLVDGYDYKKFILSAQ 96
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 34.7 bits (76), Expect = 0.068
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +3
Query: 549 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS 710
FG V + ++ +T KG+ +V + R +A +AI+ +NG + W+
Sbjct: 45 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWA 98
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 34.7 bits (76), Expect = 0.068
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +3
Query: 549 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS 710
FG V + ++ +T KG+ +V + R +A +AI+ +NG + W+
Sbjct: 55 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWA 108
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 34.7 bits (76), Expect = 0.068
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +3
Query: 549 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS 710
FG V + ++ +T KG+ +V + R +A +AI+ +NG + W+
Sbjct: 158 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWA 211
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 34.7 bits (76), Expect = 0.068
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +3
Query: 549 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS 710
FG V + ++ +T KG+ +V + R +A +AI+ +NG + W+
Sbjct: 126 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWA 179
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 552 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 656
GPV + + ++K TG KGFA+V+FK + + A+
Sbjct: 271 GPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLAL 305
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +3
Query: 552 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSK 713
GPV + + ++ ++ G+AYV+F+ ADA +A+ ++N + + WS+
Sbjct: 81 GPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQ 134
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +3
Query: 444 WS*SAPCAS*RRNCHPYIKP*HFAVE-ADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 620
WS P A N + +IK ++ + D FG + +A + G+ KG+ +V
Sbjct: 132 WSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDE-GNSKGYGFV 190
Query: 621 HFKFRADAAKAIQSLNG 671
HF+ A AI+ +NG
Sbjct: 191 HFETEHSAQTAIEKVNG 207
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +3
Query: 552 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSK 713
GPV + + ++ ++ G+AYV+F+ ADA +A+ ++N + + WS+
Sbjct: 81 GPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQ 134
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +3
Query: 444 WS*SAPCAS*RRNCHPYIKP*HFAVE-ADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 620
WS P A N + +IK ++ + D FG + +A + G+ KG+ +V
Sbjct: 132 WSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDE-GNSKGYGFV 190
Query: 621 HFKFRADAAKAIQSLNG 671
HF+ A AI+ +NG
Sbjct: 191 HFETEHSAQTAIEKVNG 207
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILN 698
E I + G V + + ++ TG KG+ ++ F A AI++LNG+ IL
Sbjct: 31 EDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNLNGYELSGRILR 90
Query: 699 VE 704
V+
Sbjct: 91 VD 92
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 32.3 bits (70), Expect = 0.36
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGH--GYDHLI 692
E DI+ +G+G + + L GF +V F + DA A+ LNG G + +I
Sbjct: 16 EKDIEHFFRGYGQIRDVLLKN--------GFGFVEFDDKRDAEDAVHDLNGKELGGERVI 67
Query: 693 LNVEWSKP 716
L ++SKP
Sbjct: 68 L--DYSKP 73
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 32.3 bits (70), Expect = 0.36
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGH--GYDHLI 692
E DI+ +G+G + + L GF +V F + DA A+ LNG G + +I
Sbjct: 16 EKDIEHFFRGYGQIRDVLLKN--------GFGFVEFDDKRDAEDAVHDLNGKELGGERVI 67
Query: 693 LNVEWSKP 716
L ++SKP
Sbjct: 68 L--DYSKP 73
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 32.3 bits (70), Expect = 0.36
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGH--GYDHLI 692
E DI+ +G+G + + L GF +V F + DA A+ LNG G + +I
Sbjct: 16 EKDIEHFFRGYGQIRDVLLKN--------GFGFVEFDDKRDAEDAVHDLNGKELGGERVI 67
Query: 693 LNVEWSKP 716
L ++SKP
Sbjct: 68 L--DYSKP 73
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLN 668
E+ + +L+ GPV + + K++ T + +GF +V F DA AI+ LN
Sbjct: 26 ESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILN 75
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLN 668
E+ + +L+ GPV + + K++ T + +GF +V F DA AI+ LN
Sbjct: 36 ESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILN 85
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 513 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 626
A +I+ G G V ++ + ++ +GH KGFAYV F
Sbjct: 89 ATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEF 126
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/79 (21%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 474 RRNCHPYI-KP*HFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 650
R +C Y+ ++ E + +L G V ++ + ++ GF +V + R DA
Sbjct: 34 RTSCTLYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAEL 93
Query: 651 AIQSLNGHGYDHLILNVEW 707
A+Q+++ D ++ +W
Sbjct: 94 ALQNISNTRMDDRVIRADW 112
>Z78545-3|CAB01767.1| 306|Caenorhabditis elegans Hypothetical
protein M03B6.4 protein.
Length = 306
Score = 31.1 bits (67), Expect = 0.83
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +2
Query: 59 VRTYKIEKCVVSKSIAKRKTWSKFGDSASDKP----GPNPATTNVAE 187
+ YKI +S + KRKT KFGD A D P NP TT+ E
Sbjct: 6 ISQYKINISSLSSPL-KRKTTRKFGDDAYDSPKYFMEGNPTTTSTFE 51
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 31.1 bits (67), Expect = 0.83
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +3
Query: 549 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS 710
FG V + + ++ T KG+ +V F + +A AI +NG + W+
Sbjct: 158 FGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWA 211
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3
Query: 507 HFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 671
++ E + +L+ FGP+ K + S G+ KG+A+ + +AI LNG
Sbjct: 300 NYLTEDQVKELLCSFGPL-KAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNG 353
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 528 IDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 671
I D FG + +A ++ G KG+ +VHF+ A AIQ +NG
Sbjct: 73 IYDTFSLFGNILSCKVAIDED-GFSKGYGFVHFETEEAAQNAIQKVNG 119
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3
Query: 507 HFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 671
++ E + +L+ FGP+ K + S G+ KG+A+ + +AI LNG
Sbjct: 300 NYLTEDQVKELLCSFGPL-KAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNG 353
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3
Query: 507 HFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 671
++ E + +L+ FGP+ K + S G+ KG+A+ + +AI LNG
Sbjct: 275 NYLTEDQVKELLCSFGPL-KAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNG 328
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3
Query: 507 HFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 671
++ E + +L+ FGP+ K + S G+ KG+A+ + +AI LNG
Sbjct: 278 NYLTEDQVKELLCSFGPL-KAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNG 331
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 525 DIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 671
+I++ KG G + K + K+K T K FAY+ F + A+ +NG
Sbjct: 70 EIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-VMNG 117
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +3
Query: 510 FAVEADIDD-----LVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 671
+ + +D DD L FG + + + ++ T CKG+A+V +A A+ SLNG
Sbjct: 379 YNLSSDTDDTLLWQLFSQFGAIVNVKILRDL-TQQCKGYAFVSMSNYTEAYNAMLSLNG 436
>AF025462-2|AAN72422.1| 1075|Caenorhabditis elegans Phospholipase c
like protein 1,isoform a protein.
Length = 1075
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/67 (28%), Positives = 28/67 (41%)
Frame = +2
Query: 137 SASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDVLSHHPAMLSLSVVHVKETI* 316
+ + P P+P T++ V FI +E P + L P L S +K I
Sbjct: 904 AVNSSPPPSPTTSSAESSVTPLFIIDSDEHGYPAIVTMGTL---PDQLQRSFNKLKNLIA 960
Query: 317 HCIVHLS 337
HC+ LS
Sbjct: 961 HCVTTLS 967
>AF025462-1|AAN72423.1| 1068|Caenorhabditis elegans Phospholipase c
like protein 1,isoform b protein.
Length = 1068
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/67 (28%), Positives = 28/67 (41%)
Frame = +2
Query: 137 SASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDVLSHHPAMLSLSVVHVKETI* 316
+ + P P+P T++ V FI +E P + L P L S +K I
Sbjct: 897 AVNSSPPPSPTTSSAESSVTPLFIIDSDEHGYPAIVTMGTL---PDQLQRSFNKLKNLIA 953
Query: 317 HCIVHLS 337
HC+ LS
Sbjct: 954 HCVTTLS 960
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +3
Query: 528 IDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVE 704
I+ + GP+ +++AK GFA+V FK A A++ LNG L VE
Sbjct: 44 IEAVFSVMGPIKSIWMAKRPP-----GFAFVTFKRTVHAFDAVKYLNGKKICDLEAKVE 97
>U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform a protein.
Length = 264
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 32 DNDNKKVKIVRTYKIEKC-VVSKSIAKRKTWSKFGDSASDKPGPN 163
D D ++KI+R K EKC + S+ W K D + G N
Sbjct: 26 DEDGLEIKIIRPIKAEKCPIKSQDGDVLDQWYKLSDKDGKEIGSN 70
>U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform b protein.
Length = 300
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 32 DNDNKKVKIVRTYKIEKC-VVSKSIAKRKTWSKFGDSASDKPGPN 163
D D ++KI+R K EKC + S+ W K D + G N
Sbjct: 62 DEDGLEIKIIRPIKAEKCPIKSQDGDVLDQWYKLSDKDGKEIGSN 106
>U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical
protein T19D12.4b protein.
Length = 1015
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 8 KIVTEYKYDNDNKKVKIV 61
K+V +YKY NDN +V I+
Sbjct: 401 KLVAQYKYGNDNTRVGII 418
>U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical
protein T19D12.4a protein.
Length = 1028
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 8 KIVTEYKYDNDNKKVKIV 61
K+V +YKY NDN +V I+
Sbjct: 414 KLVAQYKYGNDNTRVGII 431
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 525 DIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 671
++++ KG G + + + K+K T K FAY+ F + A+ +NG
Sbjct: 76 EVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-VMNG 123
>AL032646-11|CAE46682.1| 193|Caenorhabditis elegans Hypothetical
protein Y54E2A.11b protein.
Length = 193
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +3
Query: 516 VEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYD 683
+++ + +++ P KLY+ G C G + + A A++SLNG+ +D
Sbjct: 64 LQSVLKKVLERLDPAVKLYIPPSPEGG-CLGVLLTEWADQRSAQFAVKSLNGYAFD 118
>AL032646-10|CAA21681.1| 725|Caenorhabditis elegans Hypothetical
protein Y54E2A.11a protein.
Length = 725
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +3
Query: 516 VEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYD 683
+++ + +++ P KLY+ G C G + + A A++SLNG+ +D
Sbjct: 64 LQSVLKKVLERLDPAVKLYIPPSPEGG-CLGVLLTEWADQRSAQFAVKSLNGYAFD 118
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 522 ADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 629
++I++ G V ++ + K+K TG+ K FA+V F+
Sbjct: 60 SEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,456,498
Number of Sequences: 27780
Number of extensions: 299666
Number of successful extensions: 907
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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