Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021143X
(501 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 166 7e-42
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 166 7e-42
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 166 7e-42
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 133 8e-32
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 112 2e-25
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 112 2e-25
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 112 2e-25
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 91 4e-19
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 62 3e-10
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 62 3e-10
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 60 9e-10
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 60 9e-10
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 60 9e-10
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 45 4e-05
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 39 0.002
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 35 0.029
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.15
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.15
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 32 0.20
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 32 0.20
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 29 1.4
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 29 1.4
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 29 1.4
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 3.3
AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical... 28 3.3
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 28 4.4
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 28 4.4
U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domai... 27 5.8
U39742-7|AAK39197.2| 967|Caenorhabditis elegans Drosophila disc... 27 5.8
AJ295228-1|CAC35153.1| 967|Caenorhabditis elegans MAGUK protein... 27 5.8
AF406786-1|AAL01376.1| 967|Caenorhabditis elegans SAP97-like pr... 27 5.8
Z72511-6|CAA96659.2| 391|Caenorhabditis elegans Hypothetical pr... 27 7.6
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 166 bits (404), Expect = 7e-42
Identities = 78/99 (78%), Positives = 87/99 (87%)
Frame = +2
Query: 203 QTYHREVREGGPGNG*RTFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 382
+ + +E +E G G+ FKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGH
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGH 95
Query: 383 RDFIKNMMTGTSQAACAVLTVSAGTGEFEAGISKNGQTR 499
RDFIKNM+TGTSQA CAVL V+ GTGEFEAGISKNGQTR
Sbjct: 96 RDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTR 134
Score = 112 bits (269), Expect = 2e-25
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +3
Query: 99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKG 254
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKG 52
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 166 bits (404), Expect = 7e-42
Identities = 78/99 (78%), Positives = 87/99 (87%)
Frame = +2
Query: 203 QTYHREVREGGPGNG*RTFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 382
+ + +E +E G G+ FKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGH
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGH 95
Query: 383 RDFIKNMMTGTSQAACAVLTVSAGTGEFEAGISKNGQTR 499
RDFIKNM+TGTSQA CAVL V+ GTGEFEAGISKNGQTR
Sbjct: 96 RDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTR 134
Score = 112 bits (269), Expect = 2e-25
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +3
Query: 99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKG 254
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKG 52
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 166 bits (404), Expect = 7e-42
Identities = 78/99 (78%), Positives = 87/99 (87%)
Frame = +2
Query: 203 QTYHREVREGGPGNG*RTFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 382
+ + +E +E G G+ FKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGH
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGH 95
Query: 383 RDFIKNMMTGTSQAACAVLTVSAGTGEFEAGISKNGQTR 499
RDFIKNM+TGTSQA CAVL V+ GTGEFEAGISKNGQTR
Sbjct: 96 RDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTR 134
Score = 112 bits (269), Expect = 2e-25
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +3
Query: 99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKG 254
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKG 52
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 133 bits (321), Expect = 8e-32
Identities = 62/82 (75%), Positives = 71/82 (86%)
Frame = +2
Query: 203 QTYHREVREGGPGNG*RTFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 382
+ + +E +E G G+ FKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGH
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGH 95
Query: 383 RDFIKNMMTGTSQAACAVLTVS 448
RDFIKNM+TGTSQA CAVL V+
Sbjct: 96 RDFIKNMITGTSQADCAVLVVA 117
Score = 112 bits (269), Expect = 2e-25
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +3
Query: 99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKG 254
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKG 52
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 112 bits (269), Expect = 2e-25
Identities = 50/86 (58%), Positives = 63/86 (73%)
Frame = +2
Query: 242 NG*RTFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMMTGTSQ 421
NG +F YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NM+TGTSQ
Sbjct: 212 NGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQ 271
Query: 422 AACAVLTVSAGTGEFEAGISKNGQTR 499
A A+L V+A TGEFE G GQT+
Sbjct: 272 ADAAILVVNATTGEFETGFENGGQTK 297
Score = 58.8 bits (136), Expect = 2e-09
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = +3
Query: 108 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 251
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGK 214
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 112 bits (269), Expect = 2e-25
Identities = 50/86 (58%), Positives = 63/86 (73%)
Frame = +2
Query: 242 NG*RTFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMMTGTSQ 421
NG +F YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NM+TGTSQ
Sbjct: 230 NGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQ 289
Query: 422 AACAVLTVSAGTGEFEAGISKNGQTR 499
A A+L V+A TGEFE G GQT+
Sbjct: 290 ADAAILVVNATTGEFETGFENGGQTK 315
Score = 58.8 bits (136), Expect = 2e-09
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = +3
Query: 108 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 251
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGK 232
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 112 bits (269), Expect = 2e-25
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +3
Query: 99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKG 254
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKG 52
Score = 32.7 bits (71), Expect = 0.15
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 203 QTYHREVREGGPGNG*RTFKYAWVLDKLKAER 298
+ + +E +E G G+ FKYAWVLDKLK +
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKVTK 67
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 91.1 bits (216), Expect = 4e-19
Identities = 43/99 (43%), Positives = 61/99 (61%)
Frame = +2
Query: 203 QTYHREVREGGPGNG*RTFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 382
+ Y RE +E G ++ +W +D ERE+G T+++ FET K + TI+DAPGH
Sbjct: 142 EKYEREAKEKGR----ESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHFTILDAPGH 197
Query: 383 RDFIKNMMTGTSQAACAVLTVSAGTGEFEAGISKNGQTR 499
+ F+ NM+ G +QA AVL +SA GEFE G + GQTR
Sbjct: 198 KSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTR 236
Score = 67.7 bits (158), Expect = 4e-12
Identities = 28/50 (56%), Positives = 39/50 (78%)
Frame = +3
Query: 102 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 251
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGR 153
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 61.7 bits (143), Expect = 3e-10
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = +2
Query: 275 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMMTGTSQAACAVLTVSAG 454
+DK K E++RGITI++A +E+ + D PGH DFIKNM+ GTSQ AVL ++A
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 455 TGEFE 469
G E
Sbjct: 143 DGVME 147
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 111 KTHINIVVIGHVDSGKSTTT 170
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 61.7 bits (143), Expect = 3e-10
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = +2
Query: 275 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMMTGTSQAACAVLTVSAG 454
+DK K E++RGITI++A +E+ + D PGH DFIKNM+ GTSQ AVL ++A
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 455 TGEFE 469
G E
Sbjct: 143 DGVME 147
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 111 KTHINIVVIGHVDSGKSTTT 170
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 60.1 bits (139), Expect = 9e-10
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +2
Query: 275 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMMTGTSQAACAVLTVSAG 454
+D E+ RGITI+ ++ET+K + ID PGH D+IKNM+TG +Q A+L V+A
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 455 TG 460
G
Sbjct: 147 DG 148
Score = 35.1 bits (77), Expect = 0.029
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 105 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 254
++K H+N+ IGHVD GK+T T ++ G R E + +E +G
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARG 97
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 60.1 bits (139), Expect = 9e-10
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +2
Query: 275 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMMTGTSQAACAVLTVSAG 454
+D E+ RGITI+ ++ET+K + ID PGH D+IKNM+TG +Q A+L V+A
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 455 TG 460
G
Sbjct: 148 DG 149
Score = 35.1 bits (77), Expect = 0.029
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 105 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 254
++K H+N+ IGHVD GK+T T ++ G R E + +E +G
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARG 98
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 60.1 bits (139), Expect = 9e-10
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +2
Query: 275 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMMTGTSQAACAVLTVSAG 454
+D E+ RGITI+ ++ET+K + ID PGH D+IKNM+TG +Q A+L V+A
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 455 TG 460
G
Sbjct: 148 DG 149
Score = 35.1 bits (77), Expect = 0.029
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 105 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 254
++K H+N+ IGHVD GK+T T ++ G R E + +E +G
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARG 98
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 44.8 bits (101), Expect = 4e-05
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = +2
Query: 272 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMMTGTSQAACAVLTVSA 451
+LDKL+ ERERGIT+ Y + +ID PGH DF + + +L V+A
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 452 GTG 460
G
Sbjct: 136 NQG 138
Score = 32.3 bits (70), Expect = 0.20
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3
Query: 123 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 239
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2
Query: 272 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 391
V D L ERERGIT+ A + + + +ID PGH DF
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDF 103
Score = 34.3 bits (75), Expect = 0.050
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 123 NIVVIGHVDSGKSTTTGHLIYKCGGI 200
NI VI HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 35.1 bits (77), Expect = 0.029
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 275 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 391
+D + ER+RGITI A + + IID PGH DF
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDF 125
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 123 NIVVIGHVDSGKSTTTGHLIYKCGGID 203
NI + H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.15
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 194
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.15
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 194
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 32.3 bits (70), Expect = 0.20
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 305 GITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMMTGTSQAACAVLTVSAGTG 460
GIT I + E +K VT +D PGH F G A VL V+A G
Sbjct: 188 GITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDG 240
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 32.3 bits (70), Expect = 0.20
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 123 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGPSNMLGYWTN 284
+I+ GH+D S GH +K GI E FE E ++ + P+ GY T+
Sbjct: 1633 SIIPSGHIDQPISLPRGHTGFKPAGIVNED-ELFETERKQREESPTRESGYATS 1685
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +2
Query: 275 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMMTGTSQAACAVLTVSAG 454
+D + E+ RGIT+ + + +ID+PGH DF + + + A+L +
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLIDVI 117
Query: 455 TG 460
G
Sbjct: 118 EG 119
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +2
Query: 275 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMMTGTSQAACAVLTVSAG 454
+D + E+ RGIT+ + + +ID+PGH DF + + + A+L +
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLIDVI 117
Query: 455 TG 460
G
Sbjct: 118 EG 119
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 29.5 bits (63), Expect = 1.4
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Frame = +2
Query: 278 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMMTGTSQAACAVLT 442
D L E++RG +I I + Y + IID PGH +F M A V+
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 443 VSAGTG 460
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 29.5 bits (63), Expect = 1.4
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Frame = +2
Query: 278 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMMTGTSQAACAVLT 442
D L E++RG +I I + Y + IID PGH +F M A V+
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 443 VSAGTG 460
V A G
Sbjct: 107 VDAHEG 112
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 120 INIVVIGHVDSGKSTTT 170
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 120 INIVVIGHVDSGKSTTT 170
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +2
Query: 356 VTIIDAPGHRDFI--KNMMTGTSQAACAVLTVSAGTGEFEA 472
V IID+ G RDFI KN+ GT+ A V + EA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGTADAFLVVFAADDASSLEEA 113
>AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical
protein Y110A7A.8 protein.
Length = 504
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 159 STTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGPSNMLGYWT 281
STTT HL+ + GG+ Q +GK N++G+ T
Sbjct: 234 STTTAHLVSQAGGLSPLATMP-SCNVQVLGKTKKNLIGFST 273
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 93 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 185
P K+ + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 93 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 185
P K+ + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domain
protein protein 1 protein.
Length = 709
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 113 LFLAHFWLVELWVY*FHFFTSQNNIFLTLTTDYKLRV 3
+F F ++ + V HF SQ+N+ L LT D + +
Sbjct: 13 IFYVLFLIIPIKVTSIHFVDSQHNVILILTDDQDIEL 49
>U39742-7|AAK39197.2| 967|Caenorhabditis elegans Drosophila discs
large homologprotein 1, isoform a protein.
Length = 967
Score = 27.5 bits (58), Expect = 5.8
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Frame = -1
Query: 339 SNFQRAISIVIPRSRSAFSLSNTQAYLKVLYPF-PG-----PPSRTSRWYVCQYHHICRS 178
S ++ + VI +SR +LS Y++ L+ + P P R+ + HI S
Sbjct: 599 SKIEKLRNDVIAQSRMG-TLSRKSEYVRALFDYDPSRENSVAPHRSMGFNYGDILHIINS 657
Query: 177 SDQWWWT 157
SD WWT
Sbjct: 658 SDDEWWT 664
>AJ295228-1|CAC35153.1| 967|Caenorhabditis elegans MAGUK protein
DLG-1 protein.
Length = 967
Score = 27.5 bits (58), Expect = 5.8
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Frame = -1
Query: 339 SNFQRAISIVIPRSRSAFSLSNTQAYLKVLYPF-PG-----PPSRTSRWYVCQYHHICRS 178
S ++ + VI +SR +LS Y++ L+ + P P R+ + HI S
Sbjct: 599 SKIEKLRNDVIAQSRMG-TLSRKSEYVRALFDYDPSRENSVAPHRSMGFNYGDILHIINS 657
Query: 177 SDQWWWT 157
SD WWT
Sbjct: 658 SDDEWWT 664
>AF406786-1|AAL01376.1| 967|Caenorhabditis elegans SAP97-like
protein DLG-1 protein.
Length = 967
Score = 27.5 bits (58), Expect = 5.8
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Frame = -1
Query: 339 SNFQRAISIVIPRSRSAFSLSNTQAYLKVLYPF-PG-----PPSRTSRWYVCQYHHICRS 178
S ++ + VI +SR +LS Y++ L+ + P P R+ + HI S
Sbjct: 599 SKIEKLRNDVIAQSRMG-TLSRKSEYVRALFDYDPSRENSVAPHRSMGFNYGDILHIINS 657
Query: 177 SDQWWWT 157
SD WWT
Sbjct: 658 SDDEWWT 664
>Z72511-6|CAA96659.2| 391|Caenorhabditis elegans Hypothetical
protein F55A11.5 protein.
Length = 391
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 174 HLIYKCGGIDKRTIEKFEKEAQEMGKGPSN 263
+L ++ GGIDK I K+++ + + K PS+
Sbjct: 359 YLSWRYGGIDKYIIFKWQESRKSLQKSPSS 388
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,443,608
Number of Sequences: 27780
Number of extensions: 221931
Number of successful extensions: 675
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -