Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021106X
(349 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon gu... 53 6e-08
U50067-3|AAZ32801.1| 1147|Caenorhabditis elegans Sensory axon gu... 53 6e-08
U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon gu... 53 6e-08
U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon gu... 53 6e-08
AB206670-1|BAD97389.1| 1147|Caenorhabditis elegans SAX-7 SHORTFO... 53 6e-08
AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFOR... 53 6e-08
EF584655-1|ABQ57413.1| 1187|Caenorhabditis elegans LAD-2 long is... 47 3e-06
AF456361-1|AAL60232.1| 1187|Caenorhabditis elegans immunoglobuli... 47 3e-06
AC024817-49|AAF59572.3| 1187|Caenorhabditis elegans L1 cam adhes... 47 3e-06
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca... 33 0.042
AF047652-4|AAC04392.2| 399|Caenorhabditis elegans Hypothetical ... 29 1.2
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 28 1.6
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 28 1.6
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 28 1.6
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 28 1.6
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 28 1.6
Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical pr... 27 3.7
AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively... 27 3.7
AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively... 27 3.7
AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively... 27 3.7
Z93387-4|CAI91177.1| 333|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z93387-3|CAB07652.1| 352|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z83220-4|CAC42264.1| 617|Caenorhabditis elegans Hypothetical pr... 26 6.4
U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical pr... 26 6.4
AF063007-6|AAC16427.2| 523|Caenorhabditis elegans Taf (tbp-asso... 26 6.4
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 26 8.5
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 26 8.5
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 26 8.5
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 26 8.5
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 26 8.5
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 26 8.5
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 26 8.5
AC006772-3|AAF60608.1| 85|Caenorhabditis elegans Hypothetical ... 26 8.5
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 26 8.5
>U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform a protein.
Length = 1144
Score = 52.8 bits (121), Expect = 6e-08
Identities = 27/65 (41%), Positives = 38/65 (58%)
Frame = +1
Query: 76 FQPYKIKVTAVNFKGTSNVTPIEVIGWSG*GRPTQAPGNLSLSQVASGTSAVLSWTPVAP 255
FQPY+++V AVN +G +NV P V G +G G P+ P L + + SGT+ L+W V P
Sbjct: 646 FQPYEVQVQAVNSEGRTNVVPETVEGRTGEGVPSSIPSGLRVLE-KSGTTVTLAWNGVDP 704
Query: 256 SR*GG 270
G
Sbjct: 705 QTANG 709
>U50067-3|AAZ32801.1| 1147|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform d protein.
Length = 1147
Score = 52.8 bits (121), Expect = 6e-08
Identities = 27/65 (41%), Positives = 38/65 (58%)
Frame = +1
Query: 76 FQPYKIKVTAVNFKGTSNVTPIEVIGWSG*GRPTQAPGNLSLSQVASGTSAVLSWTPVAP 255
FQPY+++V AVN +G +NV P V G +G G P+ P L + + SGT+ L+W V P
Sbjct: 646 FQPYEVQVQAVNSEGRTNVVPETVEGRTGEGVPSSIPSGLRVLE-KSGTTVTLAWNGVDP 704
Query: 256 SR*GG 270
G
Sbjct: 705 QTANG 709
>U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform b protein.
Length = 1328
Score = 52.8 bits (121), Expect = 6e-08
Identities = 27/65 (41%), Positives = 38/65 (58%)
Frame = +1
Query: 76 FQPYKIKVTAVNFKGTSNVTPIEVIGWSG*GRPTQAPGNLSLSQVASGTSAVLSWTPVAP 255
FQPY+++V AVN +G +NV P V G +G G P+ P L + + SGT+ L+W V P
Sbjct: 830 FQPYEVQVQAVNSEGRTNVVPETVEGRTGEGVPSSIPSGLRVLE-KSGTTVTLAWNGVDP 888
Query: 256 SR*GG 270
G
Sbjct: 889 QTANG 893
>U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform c protein.
Length = 1331
Score = 52.8 bits (121), Expect = 6e-08
Identities = 27/65 (41%), Positives = 38/65 (58%)
Frame = +1
Query: 76 FQPYKIKVTAVNFKGTSNVTPIEVIGWSG*GRPTQAPGNLSLSQVASGTSAVLSWTPVAP 255
FQPY+++V AVN +G +NV P V G +G G P+ P L + + SGT+ L+W V P
Sbjct: 830 FQPYEVQVQAVNSEGRTNVVPETVEGRTGEGVPSSIPSGLRVLE-KSGTTVTLAWNGVDP 888
Query: 256 SR*GG 270
G
Sbjct: 889 QTANG 893
>AB206670-1|BAD97389.1| 1147|Caenorhabditis elegans SAX-7 SHORTFORM
protein.
Length = 1147
Score = 52.8 bits (121), Expect = 6e-08
Identities = 27/65 (41%), Positives = 38/65 (58%)
Frame = +1
Query: 76 FQPYKIKVTAVNFKGTSNVTPIEVIGWSG*GRPTQAPGNLSLSQVASGTSAVLSWTPVAP 255
FQPY+++V AVN +G +NV P V G +G G P+ P L + + SGT+ L+W V P
Sbjct: 646 FQPYEVQVQAVNSEGRTNVVPETVEGRTGEGVPSSIPSGLRVLE-KSGTTVTLAWNGVDP 704
Query: 256 SR*GG 270
G
Sbjct: 705 QTANG 709
>AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFORM
protein.
Length = 1331
Score = 52.8 bits (121), Expect = 6e-08
Identities = 27/65 (41%), Positives = 38/65 (58%)
Frame = +1
Query: 76 FQPYKIKVTAVNFKGTSNVTPIEVIGWSG*GRPTQAPGNLSLSQVASGTSAVLSWTPVAP 255
FQPY+++V AVN +G +NV P V G +G G P+ P L + + SGT+ L+W V P
Sbjct: 830 FQPYEVQVQAVNSEGRTNVVPETVEGRTGEGVPSSIPSGLRVLE-KSGTTVTLAWNGVDP 888
Query: 256 SR*GG 270
G
Sbjct: 889 QTANG 893
>EF584655-1|ABQ57413.1| 1187|Caenorhabditis elegans LAD-2 long isoform
protein.
Length = 1187
Score = 47.2 bits (107), Expect = 3e-06
Identities = 27/79 (34%), Positives = 38/79 (48%)
Frame = +1
Query: 13 WEEHQVRDWQQTEHLGTNTPTFQPYKIKVTAVNFKGTSNVTPIEVIGWSG*GRPTQAPGN 192
W E V D + + PTF+ Y I+V +VN G S V P GWSG P +AP +
Sbjct: 767 WTEFLVEDSLANFTIIRDQPTFRKYLIQVQSVNSVGPSIVEPEIHHGWSGEDVPDEAPRD 826
Query: 193 LSLSQVASGTSAVLSWTPV 249
+ + T+ +W PV
Sbjct: 827 FHIDTQINFTTINFTWNPV 845
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 252 AESLRGHFKGYKIQTWTDAEEDRVKRSLWSP 344
A ++ GHF GY+I+ W AE K S+ P
Sbjct: 847 ANTVNGHFVGYEIEYW-KAENTIRKYSIKIP 876
>AF456361-1|AAL60232.1| 1187|Caenorhabditis elegans immunoglobulin
domain-containingprotein Y54G2A.25 protein.
Length = 1187
Score = 47.2 bits (107), Expect = 3e-06
Identities = 27/79 (34%), Positives = 38/79 (48%)
Frame = +1
Query: 13 WEEHQVRDWQQTEHLGTNTPTFQPYKIKVTAVNFKGTSNVTPIEVIGWSG*GRPTQAPGN 192
W E V D + + PTF+ Y I+V +VN G S V P GWSG P +AP +
Sbjct: 767 WTEFLVEDSLANFTIIRDQPTFRKYLIQVQSVNSVGPSIVEPEIHHGWSGEDVPDEAPRD 826
Query: 193 LSLSQVASGTSAVLSWTPV 249
+ + T+ +W PV
Sbjct: 827 FHIDTQINFTTINFTWNPV 845
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 252 AESLRGHFKGYKIQTWTDAEEDRVKRSLWSP 344
A ++ GHF GY+I+ W AE K S+ P
Sbjct: 847 ANTVNGHFVGYEIEYW-KAENTIRKYSIKIP 876
>AC024817-49|AAF59572.3| 1187|Caenorhabditis elegans L1 cam adhesion
molecule homologprotein 2, isoform a protein.
Length = 1187
Score = 47.2 bits (107), Expect = 3e-06
Identities = 27/79 (34%), Positives = 38/79 (48%)
Frame = +1
Query: 13 WEEHQVRDWQQTEHLGTNTPTFQPYKIKVTAVNFKGTSNVTPIEVIGWSG*GRPTQAPGN 192
W E V D + + PTF+ Y I+V +VN G S V P GWSG P +AP +
Sbjct: 767 WTEFLVEDSLANFTIIRDQPTFRKYLIQVQSVNSVGPSIVEPEIHHGWSGEDVPDEAPRD 826
Query: 193 LSLSQVASGTSAVLSWTPV 249
+ + T+ +W PV
Sbjct: 827 FHIDTQINFTTINFTWNPV 845
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 252 AESLRGHFKGYKIQTWTDAEEDRVKRSLWSP 344
A ++ GHF GY+I+ W AE K S+ P
Sbjct: 847 ANTVNGHFVGYEIEYW-KAENTIRKYSIKIP 876
>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
protein 4 protein.
Length = 2325
Score = 33.5 bits (73), Expect = 0.042
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +1
Query: 13 WEEHQVRDWQQTEHLGTNTPTFQPYKIKVTAVNFKGTSNVTP-IEVIGWSG*GRPTQAPG 189
W E + L T++ Y+I+V A N +G + IEV + GRPTQAP
Sbjct: 803 WNEKNLTTKDARNTLVDELITWREYEIQVAAYNKRGLGVFSESIEVT--TSEGRPTQAPK 860
Query: 190 NLSLSQVASGTSAVLSWTPVAPSR*GGTS 276
N+ + +V + T+ + +T R G +
Sbjct: 861 NVRV-KVLNSTAVAIEFTAPEQQRIPGVN 888
Score = 31.9 bits (69), Expect = 0.13
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +1
Query: 13 WEEHQVRDWQQTEHLGTNTPTFQPYKIKVTAVNFKGTSNVTPIEVIGWSG*GRPTQAPGN 192
W+E + + +EH T+ F Y++ V + N G S T V + P+ +P N
Sbjct: 1204 WKEVRTPALRSSEHTVTDLRPFTSYEVNVFSENGFGRSLPTD-SVKARTYESVPSGSPRN 1262
Query: 193 LSLSQVASGTSAVLSWTPVA 252
+ ++ S +A++ W PVA
Sbjct: 1263 IVVTAEGS-KAAIIKWNPVA 1281
>AF047652-4|AAC04392.2| 399|Caenorhabditis elegans Hypothetical
protein C34H4.3 protein.
Length = 399
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 287 FVSFEVPPQRLGATGVQLSTALVPDAT 207
FV+F P R G TG+ L+T L DAT
Sbjct: 269 FVNFMTDPTRGGTTGLLLTTDLESDAT 295
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +1
Query: 85 YKIKVTAVNFKGTSNVTPIEVIGWSG*GRPTQAPGNLSLSQVASGTS--AVLSWTPVAPS 258
YK +V AVN +G S+ P+E G + P PG + ++ L W P P+
Sbjct: 2609 YKFRVAAVNAEGESD--PLETFGTTLAKDPFDKPGKTNAPEITDWDKDHVDLEWKP--PA 2664
Query: 259 R*GG 270
GG
Sbjct: 2665 NDGG 2668
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +1
Query: 85 YKIKVTAVNFKGTSNVTPIEVIGWSG*GRPTQAPGNLSLSQVASGTS--AVLSWTPVAPS 258
YK +V AVN +G S+ P+E G + P PG + ++ L W P P+
Sbjct: 3138 YKFRVAAVNAEGESD--PLETFGTTLAKDPFDKPGKTNAPEITDWDKDHVDLEWKP--PA 3193
Query: 259 R*GG 270
GG
Sbjct: 3194 NDGG 3197
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +1
Query: 85 YKIKVTAVNFKGTSNVTPIEVIGWSG*GRPTQAPGNLSLSQVASGTS--AVLSWTPVAPS 258
YK +V AVN +G S+ P+E G + P PG + ++ L W P P+
Sbjct: 2819 YKFRVAAVNAEGESD--PLETFGTTLAKDPFDKPGKTNAPEITDWDKDHVDLEWKP--PA 2874
Query: 259 R*GG 270
GG
Sbjct: 2875 NDGG 2878
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +1
Query: 85 YKIKVTAVNFKGTSNVTPIEVIGWSG*GRPTQAPGNLSLSQVASGTS--AVLSWTPVAPS 258
YK +V AVN +G S+ P+E G + P PG + ++ L W P P+
Sbjct: 2609 YKFRVAAVNAEGESD--PLETFGTTLAKDPFDKPGKTNAPEITDWDKDHVDLEWKP--PA 2664
Query: 259 R*GG 270
GG
Sbjct: 2665 NDGG 2668
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +1
Query: 85 YKIKVTAVNFKGTSNVTPIEVIGWSG*GRPTQAPGNLSLSQVASGTS--AVLSWTPVAPS 258
YK +V AVN +G S+ P+E G + P PG + ++ L W P P+
Sbjct: 3138 YKFRVAAVNAEGESD--PLETFGTTLAKDPFDKPGKTNAPEITDWDKDHVDLEWKP--PA 3193
Query: 259 R*GG 270
GG
Sbjct: 3194 NDGG 3197
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +1
Query: 85 YKIKVTAVNFKGTSNVTPIEVIGWSG*GRPTQAPGNLSLSQVASGTS--AVLSWTPVAPS 258
YK +V AVN +G S+ P+E G + P PG + ++ L W P P+
Sbjct: 2819 YKFRVAAVNAEGESD--PLETFGTTLAKDPFDKPGKTNAPEITDWDKDHVDLEWKP--PA 2874
Query: 259 R*GG 270
GG
Sbjct: 2875 NDGG 2878
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +1
Query: 85 YKIKVTAVNFKGTSNVTPIEVIGWSG*GRPTQAPGNLSLSQVASGTS--AVLSWTPVAPS 258
YK +V AVN +G S+ P+E G + P PG + ++ L W P P+
Sbjct: 2028 YKFRVAAVNAEGESD--PLETFGTTLAKDPFDKPGKTNAPEITDWDKDHVDLEWKP--PA 2083
Query: 259 R*GG 270
GG
Sbjct: 2084 NDGG 2087
>Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical
protein ZC504.4d protein.
Length = 1072
Score = 27.1 bits (57), Expect = 3.7
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +3
Query: 144 SDRLVRIGPTHSSSGQPQPVAGGIRHQRRAQLDSRGAESLRGHFKGYKIQTWTDAEEDR 320
S R GP HS + +P+PV+ HQR Q A L Y+ + ++ EE R
Sbjct: 397 SSRGAADGPRHSPASRPRPVS---HHQRSPQQSHPAAPHL-ADLANYEKRRRSEREERR 451
>Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical
protein ZC504.4c protein.
Length = 1096
Score = 27.1 bits (57), Expect = 3.7
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +3
Query: 144 SDRLVRIGPTHSSSGQPQPVAGGIRHQRRAQLDSRGAESLRGHFKGYKIQTWTDAEEDR 320
S R GP HS + +P+PV+ HQR Q A L Y+ + ++ EE R
Sbjct: 412 SSRGAADGPRHSPASRPRPVS---HHQRSPQQSHPAAPHL-ADLANYEKRRRSEREERR 466
>Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical
protein ZC504.4a protein.
Length = 1087
Score = 27.1 bits (57), Expect = 3.7
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +3
Query: 144 SDRLVRIGPTHSSSGQPQPVAGGIRHQRRAQLDSRGAESLRGHFKGYKIQTWTDAEEDR 320
S R GP HS + +P+PV+ HQR Q A L Y+ + ++ EE R
Sbjct: 412 SSRGAADGPRHSPASRPRPVS---HHQRSPQQSHPAAPHL-ADLANYEKRRRSEREERR 466
>AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 728
Score = 27.1 bits (57), Expect = 3.7
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +3
Query: 144 SDRLVRIGPTHSSSGQPQPVAGGIRHQRRAQLDSRGAESLRGHFKGYKIQTWTDAEEDR 320
S R GP HS + +P+PV+ HQR Q A L Y+ + ++ EE R
Sbjct: 44 SSRGAADGPRHSPASRPRPVS---HHQRSPQQSHPAAPHL-ADLANYEKRRRSEREERR 98
>AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 792
Score = 27.1 bits (57), Expect = 3.7
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +3
Query: 144 SDRLVRIGPTHSSSGQPQPVAGGIRHQRRAQLDSRGAESLRGHFKGYKIQTWTDAEEDR 320
S R GP HS + +P+PV+ HQR Q A L Y+ + ++ EE R
Sbjct: 117 SSRGAADGPRHSPASRPRPVS---HHQRSPQQSHPAAPHL-ADLANYEKRRRSEREERR 171
>AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 1087
Score = 27.1 bits (57), Expect = 3.7
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +3
Query: 144 SDRLVRIGPTHSSSGQPQPVAGGIRHQRRAQLDSRGAESLRGHFKGYKIQTWTDAEEDR 320
S R GP HS + +P+PV+ HQR Q A L Y+ + ++ EE R
Sbjct: 412 SSRGAADGPRHSPASRPRPVS---HHQRSPQQSHPAAPHL-ADLANYEKRRRSEREERR 466
>Z93387-4|CAI91177.1| 333|Caenorhabditis elegans Hypothetical
protein T02E9.2b protein.
Length = 333
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 212 HPAPAPCSAG 241
HPAPAPCS G
Sbjct: 38 HPAPAPCSGG 47
>Z93387-3|CAB07652.1| 352|Caenorhabditis elegans Hypothetical
protein T02E9.2a protein.
Length = 352
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 212 HPAPAPCSAG 241
HPAPAPCS G
Sbjct: 38 HPAPAPCSGG 47
>Z83220-4|CAC42264.1| 617|Caenorhabditis elegans Hypothetical
protein C34B7.4 protein.
Length = 617
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 170 DPLKLRATSACRRWHPAPAP 229
DP + T CR WH + AP
Sbjct: 156 DPSNIECTFCCRAWHGSCAP 175
>U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical
protein T08G2.3 protein.
Length = 417
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +2
Query: 233 SAGLPWRRVAEGALQRIQNPDLDRRRGGPG 322
S PW V + + NP + + GGPG
Sbjct: 60 SGEFPWEIVRQAHSLGLMNPQIPEKYGGPG 89
>AF063007-6|AAC16427.2| 523|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 4
protein.
Length = 523
Score = 26.2 bits (55), Expect = 6.4
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Frame = +3
Query: 15 GRAPGPGLAAN--RTPGDQHPHLPALQDQGDGGELQRNIERDSH*SDRLVRIGPTHSSSG 188
G P PG N RTPG P P Q Q R I + ++V+ GP S G
Sbjct: 189 GVNPPPGYVFNNGRTPGPPQPPPPQQQSQQQPPLEMRQIPNPNQIPPQMVQGGPHMVSVG 248
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +1
Query: 106 VNFKGTSNVTPIEVIGWSG*GRPTQAPGNLSLSQVASGTSAVLSWTPVAPSR*G 267
V F + P + W G+P A N+ +S+ G A+L V P G
Sbjct: 4176 VKFSAEVDGNPEPTVQWQFKGKPISASNNVKISR--DGKRAILELARVTPDSAG 4227
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 61 TNTPTFQPYKIKVTAVNFKGTSNVTPIEVI 150
T+ PT +P K+ V K TS V +E+I
Sbjct: 4952 TSAPTVEPTVEKLKPVESKETSEVQQVEII 4981
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 61 TNTPTFQPYKIKVTAVNFKGTSNVTPIEVI 150
T+ PT +P K+ V K TS V +E+I
Sbjct: 5030 TSAPTVEPTVEKLKPVESKETSEVQQVEII 5059
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 61 TNTPTFQPYKIKVTAVNFKGTSNVTPIEVI 150
T+ PT +P K+ V K TS V +E+I
Sbjct: 5108 TSAPTVEPTVEKLKPVESKETSEVQQVEII 5137
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 61 TNTPTFQPYKIKVTAVNFKGTSNVTPIEVI 150
T+ PT +P K+ V K TS V +E+I
Sbjct: 4952 TSAPTVEPTVEKLKPVESKETSEVQQVEII 4981
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 61 TNTPTFQPYKIKVTAVNFKGTSNVTPIEVI 150
T+ PT +P K+ V K TS V +E+I
Sbjct: 5030 TSAPTVEPTVEKLKPVESKETSEVQQVEII 5059
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 61 TNTPTFQPYKIKVTAVNFKGTSNVTPIEVI 150
T+ PT +P K+ V K TS V +E+I
Sbjct: 5108 TSAPTVEPTVEKLKPVESKETSEVQQVEII 5137
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 61 TNTPTFQPYKIKVTAVNFKGTSNVTPIEVI 150
T+ PT +P K+ V K TS V +E+I
Sbjct: 4952 TSAPTVEPTVEKLKPVESKETSEVQQVEII 4981
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 61 TNTPTFQPYKIKVTAVNFKGTSNVTPIEVI 150
T+ PT +P K+ V K TS V +E+I
Sbjct: 5030 TSAPTVEPTVEKLKPVESKETSEVQQVEII 5059
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 61 TNTPTFQPYKIKVTAVNFKGTSNVTPIEVI 150
T+ PT +P K+ V K TS V +E+I
Sbjct: 5108 TSAPTVEPTVEKLKPVESKETSEVQQVEII 5137
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +1
Query: 106 VNFKGTSNVTPIEVIGWSG*GRPTQAPGNLSLSQVASGTSAVLSWTPVAPSR*G 267
V F + P + W G+P A N+ +S+ G A+L V P G
Sbjct: 4129 VKFSAEVDGNPEPTVQWQFKGKPISASNNVKISR--DGKRAILELARVTPDSAG 4180
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +1
Query: 106 VNFKGTSNVTPIEVIGWSG*GRPTQAPGNLSLSQVASGTSAVLSWTPVAPSR*G 267
V F + P + W G+P A N+ +S+ G A+L V P G
Sbjct: 4414 VKFSAEVDGNPEPTVQWQFKGKPISASNNVKISR--DGKRAILELARVTPDSAG 4465
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +1
Query: 106 VNFKGTSNVTPIEVIGWSG*GRPTQAPGNLSLSQVASGTSAVLSWTPVAPSR*G 267
V F + P + W G+P A N+ +S+ G A+L V P G
Sbjct: 4373 VKFSAEVDGNPEPTVQWQFKGKPISASNNVKISR--DGKRAILELARVTPDSAG 4424
>AC006772-3|AAF60608.1| 85|Caenorhabditis elegans Hypothetical
protein Y46D2A.3 protein.
Length = 85
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -1
Query: 298 QVWILYPLKCPLSDSAPRESS*ARRWCRMPPAT 200
Q I YP++C S R++ A R C P T
Sbjct: 34 QYRICYPIRCKCSGPTKRKAPCANRPCPFPRTT 66
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +1
Query: 106 VNFKGTSNVTPIEVIGWSG*GRPTQAPGNLSLSQVASGTSAVLSWTPVAPSR*G 267
V F + P + W G+P A N+ +S+ G A+L V P G
Sbjct: 4145 VKFSAEVDGNPEPTVQWQFKGKPISASNNVKISR--DGKRAILELARVTPDSAG 4196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,727,454
Number of Sequences: 27780
Number of extensions: 180378
Number of successful extensions: 632
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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