Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0094
(764 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 184 6e-47
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 125 4e-29
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 122 2e-28
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 89 3e-18
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 89 3e-18
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 87 1e-17
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 87 1e-17
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 76 3e-14
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 73 2e-13
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 73 2e-13
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 73 2e-13
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 68 8e-12
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 67 1e-11
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 67 1e-11
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 66 2e-11
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 64 1e-10
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 58 7e-09
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 56 2e-08
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 56 4e-08
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 52 3e-07
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 50 2e-06
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 44 1e-04
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 41 0.001
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 39 0.003
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 39 0.004
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 37 0.018
AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical ... 30 1.6
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 28 6.3
Z46793-1|CAA86770.1| 367|Caenorhabditis elegans Hypothetical pr... 28 8.4
U00048-3|AAB53827.3| 315|Caenorhabditis elegans Nematode astaci... 28 8.4
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 184 bits (448), Expect = 6e-47
Identities = 79/114 (69%), Positives = 92/114 (80%)
Frame = +2
Query: 374 SNTVPTSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKA 553
S +S ALRAL +E K+LQ +PVEGF + + EDNLF W V I+GPP TLYQGGYFKA
Sbjct: 3 SKASTSSGALRALTMELKNLQSQPVEGFTIDV-NEDNLFVWTVGIYGPPKTLYQGGYFKA 61
Query: 554 HMKFPPDYPYSPPSIRFLTNVWHPNVYENGDLCISILHPPVDDPQSGELPCERW 715
++FP +YPYSPPS++F T VWHPNVYENGDLCISILH P+DDPQSGEL CERW
Sbjct: 62 SIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSGELACERW 115
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +1
Query: 715 DPTQSVRTVLLSVISL 762
+PTQSVRT+LLSVISL
Sbjct: 116 NPTQSVRTILLSVISL 131
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 125 bits (301), Expect = 4e-29
Identities = 48/102 (47%), Positives = 72/102 (70%)
Frame = +2
Query: 410 LALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSP 589
L + ++ PV+GF L+ ++++++WEV + GPPDTLY+GG+FKA + FP DYP P
Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKP 67
Query: 590 PSIRFLTNVWHPNVYENGDLCISILHPPVDDPQSGELPCERW 715
P ++F++ +WHPN+ + G++CISILH P DD E P ERW
Sbjct: 68 PKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERW 109
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 122 bits (295), Expect = 2e-28
Identities = 54/107 (50%), Positives = 66/107 (61%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
AL+ L EYK L P EG + EDN FEWE I GP +T + G F A + FP DY
Sbjct: 5 ALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDY 64
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISILHPPVDDPQSGELPCERWT 718
P SPP +RF ++HPN+Y +G +CISILH P DDP EL ERW+
Sbjct: 65 PLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWS 111
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 89.0 bits (211), Expect = 3e-18
Identities = 37/92 (40%), Positives = 59/92 (64%)
Frame = +2
Query: 389 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFP 568
T+ + R L ++K LQE+P G EDN+ WE IFGP +T ++ G FK ++F
Sbjct: 2 TTPSRRRLMRDFKKLQEDPPAGVSGAPT-EDNILTWEAIIFGPQETPFEDGTFKLSLEFT 60
Query: 569 PDYPYSPPSIRFLTNVWHPNVYENGDLCISIL 664
+YP PP+++F++ ++HPNVY +G +C+ IL
Sbjct: 61 EEYPNKPPTVKFISKMFHPNVYADGSICLDIL 92
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 89.0 bits (211), Expect = 3e-18
Identities = 37/92 (40%), Positives = 59/92 (64%)
Frame = +2
Query: 389 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFP 568
T+ + R L ++K LQE+P G EDN+ WE IFGP +T ++ G FK ++F
Sbjct: 2 TTPSRRRLMRDFKKLQEDPPAGVSGAPT-EDNILTWEAIIFGPQETPFEDGTFKLSLEFT 60
Query: 569 PDYPYSPPSIRFLTNVWHPNVYENGDLCISIL 664
+YP PP+++F++ ++HPNVY +G +C+ IL
Sbjct: 61 EEYPNKPPTVKFISKMFHPNVYADGSICLDIL 92
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 87.0 bits (206), Expect = 1e-17
Identities = 36/89 (40%), Positives = 53/89 (59%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
AL+ + E + L +P +G+D LF W+ I GPP++ YQGG F + FP DY
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDD-LFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISIL 664
P+ PP + F T ++HPN+ NG +C+ IL
Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDIL 89
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 87.0 bits (206), Expect = 1e-17
Identities = 36/89 (40%), Positives = 53/89 (59%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
AL+ + E + L +P +G+D LF W+ I GPP++ YQGG F + FP DY
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDD-LFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISIL 664
P+ PP + F T ++HPN+ NG +C+ IL
Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDIL 89
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 75.8 bits (178), Expect = 3e-14
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +2
Query: 452 GFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTNVWHPNV 631
G +++L E NL E + I GPPDT Y GG F +K P YP+SPP+++F T +WHPNV
Sbjct: 26 GIMIEILNE-NLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNV 84
Query: 632 -YENGDLCISIL 664
+ G +C+ IL
Sbjct: 85 SSQTGVICLDIL 96
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 72.9 bits (171), Expect = 2e-13
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Frame = +2
Query: 410 LALEYKSLQEEPVEGFRVKLL----GEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
LA E K +++ GF K + G NLF WE AI G DT+++GG ++ M F D+
Sbjct: 9 LAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDF 68
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISIL 664
P +PP +F ++HPNVY +G +C+S+L
Sbjct: 69 PSTPPKCKFEPPLFHPNVYPSGTVCLSLL 97
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 72.9 bits (171), Expect = 2e-13
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Frame = +2
Query: 410 LALEYKSLQEEPVEGFRVKLL----GEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
LA E K +++ GF K + G NLF WE AI G DT+++GG ++ M F D+
Sbjct: 9 LAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDF 68
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISIL 664
P +PP +F ++HPNVY +G +C+S+L
Sbjct: 69 PSTPPKCKFEPPLFHPNVYPSGTVCLSLL 97
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 72.9 bits (171), Expect = 2e-13
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Frame = +2
Query: 389 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFP 568
+SSA+R L +Y L ++PV+G + L EDN+ EW + G PDT + GGY+ + F
Sbjct: 17 SSSAVRRLQKDYAKLMQDPVDGIKA-LPNEDNILEWHYCLRGSPDTPFYGGYYWGKVIFK 75
Query: 569 PDYPYSPPSIRFLTNVWHPNVYENGDLCISI--LHPPVDDP 685
++P+SPP+I +T + N LC+SI HP +P
Sbjct: 76 ENFPWSPPAITMITP--NGRFQTNTRLCLSISDYHPESWNP 114
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 67.7 bits (158), Expect = 8e-12
Identities = 34/90 (37%), Positives = 46/90 (51%)
Frame = +2
Query: 395 SALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPD 574
SA R L E L+ V+ + E NL +W V + P Y G FK + FP D
Sbjct: 2 SATRRLQKELGDLKNCGVKAYENVECEETNLLKWTVLLI-PDKEPYNKGAFKVGITFPVD 60
Query: 575 YPYSPPSIRFLTNVWHPNVYENGDLCISIL 664
YP+ PP + F T ++HPNV E G C+ I+
Sbjct: 61 YPFKPPKVAFETKIYHPNVDEEGKFCLPIV 90
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 66.9 bits (156), Expect = 1e-11
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Frame = +2
Query: 389 TSSALRALALEYKSLQEEPVEGFRVKLLGEDN-LFEWEVAIFGPPDTLYQGGYFKAHMKF 565
+ +A R L E L+ E EG V N L +W++ + G TLY G F F
Sbjct: 2 SDAATRRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTF 61
Query: 566 PPDYPYSPPSIRFL--TNVWHPNVYENGDLCISIL 664
P YP++ P + F+ T HP++Y NG +C+SIL
Sbjct: 62 GPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSIL 96
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/87 (35%), Positives = 48/87 (55%)
Frame = +2
Query: 404 RALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPY 583
R + E + L +PV G E N + V I GP D+ + GG FK + P +YP
Sbjct: 7 RRIIKETQRLLADPVPGISANP-DESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPM 65
Query: 584 SPPSIRFLTNVWHPNVYENGDLCISIL 664
+ P +RF+T ++HPN+ + G +C+ IL
Sbjct: 66 AAPKVRFMTKIYHPNIDKLGRICLDIL 92
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDY 577
AL+ L +Y+ L +EPV + L E N+ EW I G P T Y+GG + + FP D+
Sbjct: 9 ALQRLKKDYQRLLKEPVPFMKAAPL-ETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDF 67
Query: 578 PYSPPSIRFLTNVWHPNVYENGDLCISI--LHPPVDDP 685
P+ PP+I LT + N LC+SI HP +P
Sbjct: 68 PFKPPAILMLTP--NGRFQTNTRLCLSISDYHPDTWNP 103
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/79 (34%), Positives = 50/79 (63%)
Frame = +2
Query: 428 SLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFL 607
+L+++ + + +++ L E E+ + P + +Y+GG F+ + PP+Y PP ++ L
Sbjct: 39 ALRDQKQKLWHLEVPSTSCLHELELTVT-PQEGIYRGGKFRFKITVPPEYNNVPPVVKCL 97
Query: 608 TNVWHPNVYENGDLCISIL 664
T VWHPN+ E+G +C+SIL
Sbjct: 98 TKVWHPNINEDGSICLSIL 116
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 58.0 bits (134), Expect = 7e-09
Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Frame = +2
Query: 497 EVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLT----NV-WHPNVYENGDLCISI 661
+V I GP DT Y G F+ + FP YP+SPP FLT NV ++PN+Y +G +C+SI
Sbjct: 446 KVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSI 505
Query: 662 L 664
L
Sbjct: 506 L 506
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 56.4 bits (130), Expect = 2e-08
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +2
Query: 491 EWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTNVWHPNVYE-NGDLCISILH 667
E+ V GP DT Y+ G ++ + P YP+ PSI FL ++HPN+ E +G +C+ +++
Sbjct: 34 EFIVRFHGPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVIN 93
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 55.6 bits (128), Expect = 4e-08
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Frame = +2
Query: 371 MSNTVPTSSA-LRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYF 547
MS T +A +R L E L++ P E + + + EDNLFEW I G T ++GG +
Sbjct: 1 MSEQYNTKNAGVRRLMKEAMELRQ-PTEMYHAQPM-EDNLFEWHFTIRGTLGTDFEGGIY 58
Query: 548 KAHMKFPPDYPYSPPSIRFLTNVWHPNVYENGDLCISILHP 670
+ FP DYP PP++ LT + + L IS HP
Sbjct: 59 HGRIIFPADYPMKPPNLILLTPNGRFELNKKVCLSISGYHP 99
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Frame = +2
Query: 368 TMSNTVPTSSALRALALEYKSLQEEP-VEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGY 544
T T P + ++ +++ ++L EEP V + + + I G +T Y+GG
Sbjct: 338 TRPETKPKITPMKVISVTPQNLPEEPNVSETNIVTVKFRLPKGIQGIIKGVEETPYEGGI 397
Query: 545 FKAHMKFPPDYPYSPPSIRFLTNVWHPNVYE-NGDLCI 655
F+ +K YP+ P+++F+T +WHP+V +G +C+
Sbjct: 398 FELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICL 435
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 16/79 (20%)
Frame = +2
Query: 476 EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSI---------------RFLT 610
E+NL + + I GP T Y GG F+ + P YP+ PP + +F+T
Sbjct: 47 ENNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVT 106
Query: 611 NVWHPNV-YENGDLCISIL 664
+WHPN+ + G +C+ IL
Sbjct: 107 RIWHPNISSQTGTICLDIL 125
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +2
Query: 476 EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTNVWH 622
ED + +A GP DT Y+ G F+ + FP +YP + P I+F T +W+
Sbjct: 27 EDKKITFHIA--GPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWN 73
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 485 LFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTNV 616
L W +I GPP T Y+ + ++ +YP PP++RF T V
Sbjct: 38 LTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKV 81
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +2
Query: 398 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYF 547
AL+ + E L +P +G+D L+ W+ I GPP++ YQGG F
Sbjct: 2 ALKRIQKELHDLGRDPPAQCSTGSVGDD-LYHWQATIMGPPESPYQGGIF 50
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = +2
Query: 374 SNTVPTSSALRALALEYKSLQEEPVEGFRVKLL---GEDNLFEWEVAIFGPPDTLYQGGY 544
+N+ ++ + + E E +G+ K + G D W + GP + ++GG
Sbjct: 28 TNSREFTNEINTVKEEKAKWDERTPQGYTAKPISFEGADIWCSWICTVPGPRGSPWEGGE 87
Query: 545 FKAHMKFPPDYPYSPPSIRFLTNVWHPNVYENGDLCISIL 664
++ + F +P PP F T + HPNV G + + +L
Sbjct: 88 YEVSVNFHK-WPIIPPICEFKTPLHHPNVDLRGSIYLKML 126
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 36.7 bits (81), Expect = 0.018
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 527 LYQGGYFKAHMKFPPDYPYSPPSIRFLTNVWHPNV 631
LY+ F + +YP+ PP ++F NV+HPNV
Sbjct: 56 LYKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNV 90
>AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical
protein F49D11.10 protein.
Length = 766
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3
Query: 507 IATSHSNRLSSPSNLTRKPSTGSSCRLLYSNAKALRAELV 388
+ +SN + SP+N +TG+SC +L+S+ K A V
Sbjct: 12 VGQPYSNLVISPNNRILATTTGASCEVLFSDKKGNDARRV 51
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 539 GYFKAHMKFPPDYPYSPP 592
GY+ +PP YPY PP
Sbjct: 297 GYYPPGYPYPPGYPYPPP 314
>Z46793-1|CAA86770.1| 367|Caenorhabditis elegans Hypothetical
protein C56G7.2 protein.
Length = 367
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +2
Query: 458 RVKLLGEDNLFEWEVAIFGPPDTLYQ---GGYFKAHMKF 565
++KL+GE + EW +FG PD L G Y H KF
Sbjct: 61 KIKLIGESSQLEW---VFGIPDGLEYTDVGVYKIGHFKF 96
>U00048-3|AAB53827.3| 315|Caenorhabditis elegans Nematode astacin
protease protein 4 protein.
Length = 315
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 276 PGISTRHNNNELEILVNIASILQHPQV 196
PG+S +NNN +N SI+ HPQV
Sbjct: 290 PGVSGNNNNNNNN-QINSNSIVNHPQV 315
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,974,402
Number of Sequences: 27780
Number of extensions: 437440
Number of successful extensions: 1154
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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