Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0073
(592 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068710-4|AAK72089.3| 340|Caenorhabditis elegans Serpentine re... 30 1.4
AC025727-8|AAG23390.2| 223|Caenorhabditis elegans Hypothetical ... 29 1.9
AF125961-2|AAD14739.1| 343|Caenorhabditis elegans Serpentine re... 29 2.5
Z93379-5|CAB07593.3| 351|Caenorhabditis elegans Hypothetical pr... 28 4.3
AF003130-8|AAB54130.2| 611|Caenorhabditis elegans Pip kinase pr... 28 5.7
AC087079-15|ABF71716.1| 152|Caenorhabditis elegans Hypothetical... 28 5.7
Z50796-1|CAA90668.1| 490|Caenorhabditis elegans Hypothetical pr... 27 10.0
U58753-1|AAC24437.2| 814|Caenorhabditis elegans Hypothetical pr... 27 10.0
AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical... 27 10.0
AC024817-15|AAU05552.1| 281|Caenorhabditis elegans Hypothetical... 27 10.0
>AF068710-4|AAK72089.3| 340|Caenorhabditis elegans Serpentine
receptor, class j protein16 protein.
Length = 340
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -1
Query: 202 FIFWFRYIGPFVYLIIDFIKLPIF-YIIVVKPKSA 101
+I W Y P ++ I+ F+ PIF Y+IV + KS+
Sbjct: 2 YIHWTHYYLPKMFGILSFVVNPIFMYLIVTEQKSS 36
>AC025727-8|AAG23390.2| 223|Caenorhabditis elegans Hypothetical
protein Y73E7A.1a protein.
Length = 223
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/62 (24%), Positives = 25/62 (40%)
Frame = +2
Query: 62 RKGEKVKISKSAHSRFWFDNDDIENRQLDEVDYQINKRAYVAEPEDEXXXXXXXXXXXXG 241
+K E K +K+ W DND + NR++ + KR ++E G
Sbjct: 23 KKDEADKKAKATEDAKWVDNDKLNNRKMQRKEDDEKKREEALRRKEENRKLAEEEMSSLG 82
Query: 242 NR 247
N+
Sbjct: 83 NK 84
>AF125961-2|AAD14739.1| 343|Caenorhabditis elegans Serpentine
receptor, class j protein15 protein.
Length = 343
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -1
Query: 202 FIFWFRYIGPFVYLIIDFIKLPIF-YIIVVKPKS 104
+I W + P ++ I+ F+ PIF Y+IV + KS
Sbjct: 2 YIHWTNHYFPKIFGILSFVANPIFMYLIVTEQKS 35
>Z93379-5|CAB07593.3| 351|Caenorhabditis elegans Hypothetical
protein F21H7.7 protein.
Length = 351
Score = 28.3 bits (60), Expect = 4.3
Identities = 9/38 (23%), Positives = 24/38 (63%)
Frame = -1
Query: 250 NSVPRNKLQ*QNLRRQFIFWFRYIGPFVYLIIDFIKLP 137
+S+P+N+ + + +F+++F PF+ ++I + +P
Sbjct: 136 SSLPQNRFRISRRKIKFLYYFFVFLPFILIVIFLLNIP 173
>AF003130-8|AAB54130.2| 611|Caenorhabditis elegans Pip kinase
protein 1 protein.
Length = 611
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -2
Query: 513 TDR*ARALKLREFANTSPSKSSASRNLPSDRNRVPLRRS 397
T R + L R+ + +++++R PS +RVPLRRS
Sbjct: 524 TARESTRLYNRDSTGINEDRANSAREPPSSMSRVPLRRS 562
>AC087079-15|ABF71716.1| 152|Caenorhabditis elegans Hypothetical
protein Y37E3.19 protein.
Length = 152
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 291 LLRRDQTPCMLLCEAATHDHT*ITKLIDTAH*VARRIVSVERDSDPMVDSAKHCSC 458
LLR+ C + E + D T T +D+AH + S + SD + K C+C
Sbjct: 71 LLRQKHQQCPVHYEFS-EDATTTTTFVDSAHSSDIQFDSTQSASDSSISFLKRCTC 125
>Z50796-1|CAA90668.1| 490|Caenorhabditis elegans Hypothetical
protein T05A6.4 protein.
Length = 490
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 59 IRKGEKVKISKSAHSRFWFDNDDIENRQLDEVDYQINKRAYVAEPEDE 202
I G++ +SK ++ + F + I+N L +D+ + + Y+A EDE
Sbjct: 366 IENGDEQYVSKLSNLEYLFGSLTIQNTTLKNLDF-LRRLKYIALFEDE 412
>U58753-1|AAC24437.2| 814|Caenorhabditis elegans Hypothetical
protein W03B1.2 protein.
Length = 814
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -2
Query: 105 LLCALFEIFTFSPFRIFHS 49
L CALF I T S R FHS
Sbjct: 448 LYCALFAIATVSTLRFFHS 466
>AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical
protein Y87G2A.19 protein.
Length = 110
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 241 PRNKLQ*QNLRRQFIFWFRYIGPFVYLIIDFIKLPIFYIIV 119
PR K+ + R +F Y+ F+ LI F LP+F++ V
Sbjct: 39 PRCKVHGETELRFVNGFFTYVSFFIILIFGFAILPLFFLWV 79
>AC024817-15|AAU05552.1| 281|Caenorhabditis elegans Hypothetical
protein Y54G2A.37 protein.
Length = 281
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 317 HVAM*SRHPRSYVNYQAHRHSPLSSSPDRLSGTRFR 424
H+A+ R R + + +H+ S+ DRL GTRF+
Sbjct: 3 HLAVEMRDFRMKTGFFSSQHAGWSNRNDRLPGTRFK 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,940,878
Number of Sequences: 27780
Number of extensions: 259201
Number of successful extensions: 666
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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