Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0061
(723 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 60 2e-09
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 55 6e-08
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 55 6e-08
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 54 1e-07
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 54 1e-07
Z68333-4|CAA92723.2| 271|Caenorhabditis elegans Hypothetical pr... 31 1.1
U28971-3|AAK68670.1| 319|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81104-9|CAB70252.3| 488|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z75547-6|CAA99903.1| 377|Caenorhabditis elegans Hypothetical pr... 28 7.8
AL110479-18|CAB54365.1| 484|Caenorhabditis elegans Hypothetical... 28 7.8
AC199169-9|ABO33255.1| 435|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/60 (45%), Positives = 36/60 (60%)
Frame = +1
Query: 43 GEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTG 222
GEG HNYHH FP DYR E + ++N T IDF A +G YD KT +I+++ + G
Sbjct: 262 GEGGHNYHHTFPQDYRTSEHAE-FLNWTRVLIDFGASIGMVYDRKTTPEEVIQRQCKKFG 320
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/60 (45%), Positives = 36/60 (60%)
Frame = +1
Query: 43 GEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTG 222
GEG HNYHH FP DYR E + ++N T IDF A +G YD KT +I+++ + G
Sbjct: 262 GEGGHNYHHTFPQDYRTSEHAE-FLNWTRVLIDFGASIGMVYDRKTTPEEVIQRQCKKFG 320
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/60 (46%), Positives = 33/60 (55%)
Frame = +1
Query: 43 GEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTG 222
GEG HN+HH FP DYR E +Y N T ID A +G YD KTA II ++ G
Sbjct: 271 GEGGHNFHHTFPQDYRTSEYSLKY-NWTRVLIDTAAALGLVYDRKTACDEIIGRQVSNHG 329
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/60 (46%), Positives = 33/60 (55%)
Frame = +1
Query: 43 GEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTG 222
GEG HN+HH FP DYR E +Y N T ID A +G YD KTA II ++ G
Sbjct: 271 GEGGHNFHHTFPQDYRTSEYSLKY-NWTRVLIDTAAALGLVYDRKTACDEIIGRQVSNHG 329
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 54.0 bits (124), Expect = 1e-07
Identities = 31/73 (42%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Frame = +1
Query: 16 SGMANAFT----FGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTA 183
S + N FT GEG HN+HH FP DYRA E Y N T ID A +G YD KT
Sbjct: 257 SAVENVFTTVVAVGEGGHNFHHTFPQDYRASEYSLIY-NWTRVLIDTAAVLGLVYDRKTI 315
Query: 184 STNIIEKRALRTG 222
+ I ++ G
Sbjct: 316 ADEFISRQVANHG 328
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 54.0 bits (124), Expect = 1e-07
Identities = 31/73 (42%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Frame = +1
Query: 16 SGMANAFT----FGEGFHNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTA 183
S + N FT GEG HN+HH FP DYRA E Y N T ID A +G YD KT
Sbjct: 257 SAVENVFTTVVAVGEGGHNFHHTFPQDYRASEYSLIY-NWTRVLIDTAAVLGLVYDRKTI 315
Query: 184 STNIIEKRALRTG 222
+ I ++ G
Sbjct: 316 ADEFISRQVANHG 328
>Z68333-4|CAA92723.2| 271|Caenorhabditis elegans Hypothetical
protein C05C12.4 protein.
Length = 271
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 237 TTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLLK*LFLI 386
TT W +KQS K F Y+ D F KV+ ++ I + ++ LF I
Sbjct: 123 TTYWKTIKQSQKFFEVVYNKSDSFFKVVGSKSCKIFWEYRRLVILVLFAI 172
>U28971-3|AAK68670.1| 319|Caenorhabditis elegans Hypothetical
protein B0244.7 protein.
Length = 319
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 348 YNNSYLLK*LFLIFAGNFCIGFYCINLNLYIFLLVLSQILKL 473
YN LL+ + IF C+ F+ + LN+YIF +++ + K+
Sbjct: 40 YNIEMLLR--WAIFIIPCCMSFFALFLNIYIFYVLIPNLRKM 79
>Z81104-9|CAB70252.3| 488|Caenorhabditis elegans Hypothetical
protein M199.2 protein.
Length = 488
Score = 27.9 bits (59), Expect = 7.8
Identities = 22/95 (23%), Positives = 38/95 (40%)
Frame = +1
Query: 55 HNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDGTY 234
++Y P D E + R +D++ W+ A +T + ++E+ AL T
Sbjct: 209 YDYEKGVPLDRETCEKNLEKLIKNDRDVDYYEWLNLAQQCRTENHKLMEQMALGMA-FTS 267
Query: 235 KRPNGMN*NSLQKASLRNITFLMTFAKLFKNRLAE 339
N + +KA IT + K+F AE
Sbjct: 268 AMANKQHKKVSRKADKDKITGAIVQNKMFSIETAE 302
>Z75547-6|CAA99903.1| 377|Caenorhabditis elegans Hypothetical
protein R11D1.5 protein.
Length = 377
Score = 27.9 bits (59), Expect = 7.8
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 297 FDDFCKVIQKQASGISYYNNSYLLK*LFLIFAGNFCIGFYCINLNLYIFLL-VLSQILKL 473
F FCK +Q+ + IS N+YL+ L +I+ IG Y L +YI + +L IL L
Sbjct: 6 FSLFCKSLQETCTFISLILNAYLI--LLIIYKSPKKIGNYKY-LMIYICVFEILYTILGL 62
Query: 474 I 476
I
Sbjct: 63 I 63
>AL110479-18|CAB54365.1| 484|Caenorhabditis elegans Hypothetical
protein Y105C5B.19 protein.
Length = 484
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/53 (24%), Positives = 27/53 (50%)
Frame = +1
Query: 55 HNYHHVFPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRAL 213
++Y P D + E + R +D++ W+ +A +T + N++E+ AL
Sbjct: 207 YDYAKGEPLDRKTCEKNLEKLIKNDRDVDYYEWLNFAKRCRTQNQNLMEEMAL 259
>AC199169-9|ABO33255.1| 435|Caenorhabditis elegans Hypothetical
protein F38A1.4 protein.
Length = 435
Score = 27.9 bits (59), Expect = 7.8
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 228 DLQTTKWNELKQSSKSFF 281
D+ TKWN ++S K+FF
Sbjct: 139 DIVNTKWNSFRESDKNFF 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,403,232
Number of Sequences: 27780
Number of extensions: 318156
Number of successful extensions: 740
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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