Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0039
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23513-6|AAB36864.1| 1168|Caenorhabditis elegans Hypothetical pr... 223 1e-58
U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily ass... 127 6e-30
U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily ass... 127 6e-30
Z71186-4|CAA94916.1| 867|Caenorhabditis elegans Hypothetical pr... 116 1e-26
Z92827-5|CAB07325.1| 732|Caenorhabditis elegans Hypothetical pr... 101 5e-22
Z70780-5|CAD91633.1| 779|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z70780-3|CAA94828.2| 828|Caenorhabditis elegans Hypothetical pr... 33 0.14
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 2.3
AL110490-16|CAB54451.2| 922|Caenorhabditis elegans Hypothetical... 29 3.0
AL031634-3|CAA21036.1| 556|Caenorhabditis elegans Hypothetical ... 29 3.0
AL023851-2|CAA19555.2| 209|Caenorhabditis elegans Hypothetical ... 28 5.3
AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase ... 28 7.0
AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered cut... 28 7.0
AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical... 28 7.0
Z83115-7|CAJ85758.1| 318|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z83115-6|CAB05558.1| 384|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81137-12|CAJ85772.1| 318|Caenorhabditis elegans Hypothetical p... 27 9.2
Z81137-11|CAB03472.1| 384|Caenorhabditis elegans Hypothetical p... 27 9.2
AL032639-4|CAA21636.2| 858|Caenorhabditis elegans Hypothetical ... 27 9.2
>U23513-6|AAB36864.1| 1168|Caenorhabditis elegans Hypothetical protein
D2021.1 protein.
Length = 1168
Score = 223 bits (544), Expect = 1e-58
Identities = 105/218 (48%), Positives = 146/218 (66%), Gaps = 11/218 (5%)
Frame = +2
Query: 56 GLTAALKLDLGLFSTKTLVEAWPDHAVEVRTQLMQSADENWDATGRRRVWACASHRSHTT 235
GLT L+LDL LFSTK + E + +E+RTQ + N D ++ W C S S+TT
Sbjct: 738 GLTGCLRLDLSLFSTKAVAEIDGNQEIEIRTQYQLPPETNCDHASQQ-TWQCVSDPSYTT 796
Query: 236 VRKYAQYQAGSFQESLREERERAAPLSDSDSGPAKRR-----RAA------RMLRFGTNV 382
V KYA+YQ+ SF+ +L+ E E+ GP+ +R RA+ + +++GTN+
Sbjct: 797 VNKYAEYQSESFKHTLKGEAEKIKKNVGGTRGPSPKRMKLYKRASSPPKHLKSIKYGTNI 856
Query: 383 DLSDERKWRPQLAELQKLPAFARVASAANMLSHVGHVILGMNTVQLYMKVPGSRTPGHQE 562
DLSD+ KW Q+ EL KLPAF R+ + +NMLSH+GH + GMNTV+L+MKVPG RTP HQ+
Sbjct: 857 DLSDDTKWGKQINELSKLPAFCRLIAGSNMLSHLGHQVHGMNTVKLFMKVPGCRTPAHQD 916
Query: 563 NNNFCSINLNIGPGDCEWFGVPDAYWGGVRELCERHGL 676
+N+ SIN+NIGPGDCEWF VP YWG + +LCE++G+
Sbjct: 917 SNHMASININIGPGDCEWFAVPYEYWGKMHKLCEKNGV 954
>U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily assigned
gene nameprotein 279, isoform a protein.
Length = 1020
Score = 127 bits (307), Expect = 6e-30
Identities = 72/221 (32%), Positives = 114/221 (51%), Gaps = 15/221 (6%)
Frame = +2
Query: 56 GLTAALKLDLGLFSTKTLVEAWPDHAVEVRTQLMQSADENWDATGRRRVWACASHRSHTT 235
G+ AL + LFS + + P+ ++++ Q+ QSAD N D+ G R W S+ S
Sbjct: 591 GIAKALNIKTELFSLPEIAKCHPELSIDILNQVPQSADGNCDSKGIR-CWDVTSYSSKMK 649
Query: 236 VRKYAQYQAGSFQESLREERERAAPLSDSDSGPAKRRRAARM---------------LRF 370
++ + +Y E+++ + + ++ +A R+ ++F
Sbjct: 650 LQDFERYMQKEESEAMQAFETISNCTAKELESTCQKLKAERIAAQNAIEGCDETMPWIKF 709
Query: 371 GTNVDLSDERKWRPQLAELQKLPAFARVASAANMLSHVGHVILGMNTVQLYMKVPGSRTP 550
GTN+DL E ++ Q+ E++KLP F N+L++ G +LG+NTVQ+Y K GSRTP
Sbjct: 710 GTNIDLLSEN-FKKQMNEIEKLPTFLLPNREGNLLNYAGVDVLGINTVQMYAKPIGSRTP 768
Query: 551 GHQENNNFCSINLNIGPGDCEWFGVPDAYWGGVRELCERHG 673
H EN+ SIN N GPG C WF VP YWG + + HG
Sbjct: 769 AHMENSLMASINWNRGPGTCVWFAVPYEYWGQLEFMIGEHG 809
>U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily assigned
gene nameprotein 279, isoform b protein.
Length = 1061
Score = 127 bits (307), Expect = 6e-30
Identities = 72/221 (32%), Positives = 114/221 (51%), Gaps = 15/221 (6%)
Frame = +2
Query: 56 GLTAALKLDLGLFSTKTLVEAWPDHAVEVRTQLMQSADENWDATGRRRVWACASHRSHTT 235
G+ AL + LFS + + P+ ++++ Q+ QSAD N D+ G R W S+ S
Sbjct: 632 GIAKALNIKTELFSLPEIAKCHPELSIDILNQVPQSADGNCDSKGIR-CWDVTSYSSKMK 690
Query: 236 VRKYAQYQAGSFQESLREERERAAPLSDSDSGPAKRRRAARM---------------LRF 370
++ + +Y E+++ + + ++ +A R+ ++F
Sbjct: 691 LQDFERYMQKEESEAMQAFETISNCTAKELESTCQKLKAERIAAQNAIEGCDETMPWIKF 750
Query: 371 GTNVDLSDERKWRPQLAELQKLPAFARVASAANMLSHVGHVILGMNTVQLYMKVPGSRTP 550
GTN+DL E ++ Q+ E++KLP F N+L++ G +LG+NTVQ+Y K GSRTP
Sbjct: 751 GTNIDLLSEN-FKKQMNEIEKLPTFLLPNREGNLLNYAGVDVLGINTVQMYAKPIGSRTP 809
Query: 551 GHQENNNFCSINLNIGPGDCEWFGVPDAYWGGVRELCERHG 673
H EN+ SIN N GPG C WF VP YWG + + HG
Sbjct: 810 AHMENSLMASINWNRGPGTCVWFAVPYEYWGQLEFMIGEHG 850
>Z71186-4|CAA94916.1| 867|Caenorhabditis elegans Hypothetical protein
F23D12.5 protein.
Length = 867
Score = 116 bits (280), Expect = 1e-26
Identities = 78/234 (33%), Positives = 115/234 (49%), Gaps = 27/234 (11%)
Frame = +2
Query: 56 GLTAALKLDLGLFSTKTLVEAWPDHAVEVRTQLMQSADENWDATGRRRV------WACAS 217
G+ A +D F TL +PD+ +++R Q+ QS+ N+ + V WA
Sbjct: 434 GIEEAFGMDRQTFDISTLAPLYPDYPLKIRRQMPQSSATNFYMNDKNTVQRLGNAWAVFD 493
Query: 218 HRSHTTVRKYAQ------------YQA-----GSFQESL----REERERAAPLSDSDSGP 334
T +R +A+ YQA +F E + ++ +E PLS
Sbjct: 494 FEGVTQLRDFAKNYESLKDIGRSAYQAILRNPSAFSEVMDDMKKQIKENTIPLSPEHKLT 553
Query: 335 AKRRRAARMLRFGTNVDLSDERKWRPQLAELQKLPAFARVASAANMLSHVGHVILGMNTV 514
A +L FGTN+DL D+R ++ QL E++KLP R A N+L+ + G+N
Sbjct: 554 VHEN--ATVLAFGTNIDLDDQR-FKEQLDEIKKLPDCLRPDGAGNLLNFAQESLAGLNKP 610
Query: 515 QLYMKVPGSRTPGHQENNNFCSINLNIGPGDCEWFGVPDAYWGGVRELCERHGL 676
Q+Y K PG+RT H EN SIN+N GPGDC W+GVP Y G + L ++H L
Sbjct: 611 QVYCKPPGARTTAHLENQALGSININHGPGDCVWYGVPMEYSGRMEVLIKKHRL 664
>Z92827-5|CAB07325.1| 732|Caenorhabditis elegans Hypothetical
protein C29F7.6 protein.
Length = 732
Score = 101 bits (242), Expect = 5e-22
Identities = 60/186 (32%), Positives = 89/186 (47%)
Frame = +2
Query: 119 WPDHAVEVRTQLMQSADENWDATGRRRVWACASHRSHTTVRKYAQYQAGSFQESLREERE 298
W D V + + N+D + W C H ++ + + QAG QE++ +
Sbjct: 371 WNDEERIVEKRTLAEYAVNYDMM-EKIGWKCVEHAAY---KNNFENQAGFVQEAVDAYMK 426
Query: 299 RAAPLSDSDSGPAKRRRAARMLRFGTNVDLSDERKWRPQLAELQKLPAFARVASAANMLS 478
PLS + R + F TNVDL +E+K++P + EL KLP F + N
Sbjct: 427 YQLPLSPTAVNGELYDRTYPLTSFATNVDLKEEQKFQPLIQELDKLPNFLKTKGGLN--E 484
Query: 479 HVGHVILGMNTVQLYMKVPGSRTPGHQENNNFCSINLNIGPGDCEWFGVPDAYWGGVREL 658
++ I G+N VQ+Y K PGSRT H EN S+NLN+GPG C W+ V + +L
Sbjct: 485 YIKESIGGVNEVQMYFKQPGSRTTCHIENQAIGSLNLNLGPGKCIWYAVASEHSAKFEQL 544
Query: 659 CERHGL 676
+ L
Sbjct: 545 LMKKNL 550
>Z70780-5|CAD91633.1| 779|Caenorhabditis elegans Hypothetical
protein F46B6.5c protein.
Length = 779
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +2
Query: 224 SHTTVRKYAQYQAGSFQESLREERERAAPLSDSDSGPAKRRRAARMLRFGTNVD-----L 388
SH T+ ++ +Y +++ +RE + S + P KR R A R + +
Sbjct: 495 SHPTITRHRRYSEAHHSTNVQSDRESISSTSSRSNAPEKRERDAEKERKRKDKEHRRALE 554
Query: 389 SDERKWRPQLAELQKLPAF 445
+D K+ + E QK P+F
Sbjct: 555 ADNNKYHAREKEKQKQPSF 573
>Z70780-3|CAA94828.2| 828|Caenorhabditis elegans Hypothetical
protein F46B6.5a protein.
Length = 828
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +2
Query: 224 SHTTVRKYAQYQAGSFQESLREERERAAPLSDSDSGPAKRRRAARMLRFGTNVD-----L 388
SH T+ ++ +Y +++ +RE + S + P KR R A R + +
Sbjct: 495 SHPTITRHRRYSEAHHSTNVQSDRESISSTSSRSNAPEKRERDAEKERKRKDKEHRRALE 554
Query: 389 SDERKWRPQLAELQKLPAF 445
+D K+ + E QK P+F
Sbjct: 555 ADNNKYHAREKEKQKQPSF 573
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +2
Query: 260 AGSFQESLREERERAAPLSDSDSGPAKRRRAARMLRFGTNVDLSDERKWRPQLAELQKLP 439
A E L E P SDS + + A LR ++ + +K +LAE+QK+P
Sbjct: 2767 AKDIDEHLLNSIEEKLPTIPSDSSD-QLQIAIGKLRDRKQANIDEGKKILNELAEIQKMP 2825
Query: 440 AFARVASAANMLS 478
A + A N+L+
Sbjct: 2826 ADSLNEHALNLLA 2838
>AL110490-16|CAB54451.2| 922|Caenorhabditis elegans Hypothetical
protein Y48B6A.11 protein.
Length = 922
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 470 MLSHVGHVILGMNTVQLYMKVPGSRTPGHQENNNFCSINLNIGPGDCEWFGV 625
+L + I G+NTV LY + + P H E+ + SIN WF +
Sbjct: 237 ILEDTNYEIKGVNTVYLYFGMYKTTFPWHAEDMDLYSINFLHFGAPKYWFAI 288
>AL031634-3|CAA21036.1| 556|Caenorhabditis elegans Hypothetical
protein Y32B12C.3 protein.
Length = 556
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 479 HVGHVILGMNTVQLYMKVPGSRTPGHQEN 565
HV HV+ +N ++ +VP SR PG+ N
Sbjct: 526 HVLHVLYNVNQKFVFSRVPRSRAPGYVVN 554
>AL023851-2|CAA19555.2| 209|Caenorhabditis elegans Hypothetical
protein Y68A4B.2 protein.
Length = 209
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 407 ATCVRLRGLRWCRSGACGRRGVAWR 333
ATC RL W A G G WR
Sbjct: 122 ATCTRLNSFEWTDGSATGTDGFNWR 146
>AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase
protein.
Length = 1497
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/60 (30%), Positives = 22/60 (36%)
Frame = +2
Query: 203 WACASHRSHTTVRKYAQYQAGSFQESLREERERAAPLSDSDSGPAKRRRAARMLRFGTNV 382
W A R H R Y S SL RE + L +SG R +L F + V
Sbjct: 43 WGSAGSRLHRDARSYYSDGVYSVNNSLPSARELSDILFKGESGIPNTRGCTTLLAFFSQV 102
>AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered
cuticle protein 3 protein.
Length = 1497
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/60 (30%), Positives = 22/60 (36%)
Frame = +2
Query: 203 WACASHRSHTTVRKYAQYQAGSFQESLREERERAAPLSDSDSGPAKRRRAARMLRFGTNV 382
W A R H R Y S SL RE + L +SG R +L F + V
Sbjct: 43 WGSAGSRLHRDARSYYSDGVYSVNNSLPSARELSDILFKGESGIPNTRGCTTLLAFFSQV 102
>AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical
protein F53G12.3 protein.
Length = 1503
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/60 (30%), Positives = 22/60 (36%)
Frame = +2
Query: 203 WACASHRSHTTVRKYAQYQAGSFQESLREERERAAPLSDSDSGPAKRRRAARMLRFGTNV 382
W A R H R Y S SL RE + L +SG R +L F + V
Sbjct: 53 WGSAGSRLHRDARSYYSDGVYSVNNSLPSARELSDILFKGESGIPNTRGCTTLLAFFSQV 112
>Z83115-7|CAJ85758.1| 318|Caenorhabditis elegans Hypothetical
protein K11D2.4b protein.
Length = 318
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/78 (25%), Positives = 29/78 (37%)
Frame = -2
Query: 270 NEPAWYCAYLRTVVWERCEAQAHTRRRPVASQFSSADCMSCVRTSTAWSGHASTSVFVEN 91
NE A+ C + ++ H R F A C R + GH ST +
Sbjct: 131 NEKAYVCTFCAKSFTQKSHLDQHERIHTGVKPFLCAFCGRSFRQRSQQIGHESTHL---- 186
Query: 90 SPRSSLRAAVSPQHHGDG 37
+ S+ A +P H G G
Sbjct: 187 THFSTSSAQQTPTHGGGG 204
>Z83115-6|CAB05558.1| 384|Caenorhabditis elegans Hypothetical
protein K11D2.4a protein.
Length = 384
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/78 (25%), Positives = 29/78 (37%)
Frame = -2
Query: 270 NEPAWYCAYLRTVVWERCEAQAHTRRRPVASQFSSADCMSCVRTSTAWSGHASTSVFVEN 91
NE A+ C + ++ H R F A C R + GH ST +
Sbjct: 197 NEKAYVCTFCAKSFTQKSHLDQHERIHTGVKPFLCAFCGRSFRQRSQQIGHESTHL---- 252
Query: 90 SPRSSLRAAVSPQHHGDG 37
+ S+ A +P H G G
Sbjct: 253 THFSTSSAQQTPTHGGGG 270
>Z81137-12|CAJ85772.1| 318|Caenorhabditis elegans Hypothetical
protein K11D2.4b protein.
Length = 318
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/78 (25%), Positives = 29/78 (37%)
Frame = -2
Query: 270 NEPAWYCAYLRTVVWERCEAQAHTRRRPVASQFSSADCMSCVRTSTAWSGHASTSVFVEN 91
NE A+ C + ++ H R F A C R + GH ST +
Sbjct: 131 NEKAYVCTFCAKSFTQKSHLDQHERIHTGVKPFLCAFCGRSFRQRSQQIGHESTHL---- 186
Query: 90 SPRSSLRAAVSPQHHGDG 37
+ S+ A +P H G G
Sbjct: 187 THFSTSSAQQTPTHGGGG 204
>Z81137-11|CAB03472.1| 384|Caenorhabditis elegans Hypothetical
protein K11D2.4a protein.
Length = 384
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/78 (25%), Positives = 29/78 (37%)
Frame = -2
Query: 270 NEPAWYCAYLRTVVWERCEAQAHTRRRPVASQFSSADCMSCVRTSTAWSGHASTSVFVEN 91
NE A+ C + ++ H R F A C R + GH ST +
Sbjct: 197 NEKAYVCTFCAKSFTQKSHLDQHERIHTGVKPFLCAFCGRSFRQRSQQIGHESTHL---- 252
Query: 90 SPRSSLRAAVSPQHHGDG 37
+ S+ A +P H G G
Sbjct: 253 THFSTSSAQQTPTHGGGG 270
>AL032639-4|CAA21636.2| 858|Caenorhabditis elegans Hypothetical
protein Y38F1A.3 protein.
Length = 858
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/57 (19%), Positives = 29/57 (50%)
Frame = +2
Query: 254 YQAGSFQESLREERERAAPLSDSDSGPAKRRRAARMLRFGTNVDLSDERKWRPQLAE 424
+ A F ++ ++++ APL ++GP ++ ++++ D DE+ + + E
Sbjct: 793 FSALPFTKTSGPQKKKVAPLQMHEAGPIPKKEEPKVIKVNGEEDEEDEKTTKEEPVE 849
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,249,454
Number of Sequences: 27780
Number of extensions: 261326
Number of successful extensions: 1123
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1115
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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