Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_B14
         (367 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032630-13|CAA21568.1|  348|Caenorhabditis elegans Hypothetical...    27   5.4  
U70852-4|AAK29816.2|   93|Caenorhabditis elegans Hypothetical pr...    26   7.2  
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl...    26   7.2  
Z98860-1|CAB11544.1|  677|Caenorhabditis elegans Hypothetical pr...    26   9.5  
AF016449-13|AAG24003.1|  350|Caenorhabditis elegans Serpentine r...    26   9.5  

>AL032630-13|CAA21568.1|  348|Caenorhabditis elegans Hypothetical
           protein Y62H9A.13 protein.
          Length = 348

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = -1

Query: 274 HKKVNE*LFSFSQSRGLGHCSDGWTSTYDCVSHSLANFLQFLEG--IPRRRRNGP 116
           + ++NE +  FS +   GH +    + YD V HSL+N +Q  E   +PR  R  P
Sbjct: 197 YDEINE-VPRFSDNPVFGHLNLPEVTIYDAVFHSLSN-VQTTESYTLPRELRTWP 249


>U70852-4|AAK29816.2|   93|Caenorhabditis elegans Hypothetical
           protein F45E4.5 protein.
          Length = 93

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +1

Query: 199 WSSRRYSGPGHGF 237
           W   RYS PGHGF
Sbjct: 40  WGRPRYSPPGHGF 52


>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
           protein 2 protein.
          Length = 1080

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
 Frame = +3

Query: 207 PSLQWPRPRLWLKENNHS---LTFLCIFSCLYNHIFCIIY 317
           P L WP  R  +  N      LTF+CI S   N + C +Y
Sbjct: 598 PKLLWPFSRKSITCNLSDCVLLTFVCIPSAFANLLLCSLY 637


>Z98860-1|CAB11544.1|  677|Caenorhabditis elegans Hypothetical
           protein Y26G10.1 protein.
          Length = 677

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +1

Query: 208 RRYSGPGHGFG*RKIIIH*LFYVFSHVYIITFFVSYIHI 324
           RR      G+   +++I+ +FY+F    II + V Y H+
Sbjct: 600 RRIGFVDTGYPGYQMLINRIFYIFPFGSIICYIVLYFHV 638


>AF016449-13|AAG24003.1|  350|Caenorhabditis elegans Serpentine
           receptor, class t protein8 protein.
          Length = 350

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +3

Query: 234 LWLKENNHSLTFLCIFSCLYNHIFCIIYTY 323
           +WL +    + F  +  C+++ I C IY +
Sbjct: 231 IWLYKTRRQIIFQALMLCVFHGIVCGIYEF 260


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,585,233
Number of Sequences: 27780
Number of extensions: 150653
Number of successful extensions: 560
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 560
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)