Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20171
         (585 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   5.1  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    21   8.9  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   8.9  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   8.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   8.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   8.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   8.9  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -2

Query: 275 DVFLNDDLHDYV 240
           D+F+ DDL+DY+
Sbjct: 118 DLFVFDDLNDYI 129


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -2

Query: 104 YVTKNINVYLYNAINCIFIKK 42
           ++  + NVY Y   NC +  K
Sbjct: 35  HLKSHSNVYQYRCANCTYATK 55


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 16  PKYELKIRDFFINIQLIALYKYT 84
           P YEL    FF+   LI L  YT
Sbjct: 211 PLYELSTIIFFLIPMLIILVVYT 233


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 376 IFSAHGSYLLVCTVACYV 323
           IFSA GS+ L   V  YV
Sbjct: 200 IFSAMGSFFLPMLVMLYV 217


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 438 RWCRWWRHDVE 470
           RWC W   D+E
Sbjct: 387 RWCTWSEGDLE 397


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 438 RWCRWWRHDVE 470
           RWC W   D+E
Sbjct: 387 RWCTWSEGDLE 397


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 438 RWCRWWRHDVE 470
           RWC W   D+E
Sbjct: 387 RWCTWSEGDLE 397


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,475
Number of Sequences: 438
Number of extensions: 3629
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)