Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0279.Seq
         (753 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    32   0.005
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    29   0.062
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                25   1.0  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   2.3  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    23   3.1  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    23   3.1  
DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    22   7.1  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    22   7.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   7.1  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   7.1  

>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 32.3 bits (70), Expect = 0.005
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = +2

Query: 668 HICIDTGFFHRDLKPENLLCCGPEXG 745
           H C   G  HRDLKPENLL      G
Sbjct: 23  HHCHHNGVVHRDLKPENLLLASKAKG 48


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 28.7 bits (61), Expect = 0.062
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 482 IA*KTQPRQIVKLREVIRENDTLYFVFEYMAG 577
           +A  T+P  +V+L    +  D LYFV EY+ G
Sbjct: 38  LALSTKPPFLVQLHSCFQTMDRLYFVMEYVNG 69


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 674 CIDTGFFHRDLKPENLL 724
           C + G  H D+KP+N+L
Sbjct: 171 CHNAGIVHADVKPKNIL 187


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +2

Query: 695 HRDLKPENLL 724
           +RDLKPENLL
Sbjct: 489 YRDLKPENLL 498


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 558 YLNIWRGNLYQLIR 599
           +L+ WRGNL  +IR
Sbjct: 69  FLSYWRGNLANVIR 82


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 558 YLNIWRGNLYQLIR 599
           +L+ WRGNL  +IR
Sbjct: 69  FLSYWRGNLANVIR 82


>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 100 HHFQNTFKLIQTTYVK 53
           +H QN FK+I++T  K
Sbjct: 57  NHIQNIFKIIKSTNEK 72


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 100 HHFQNTFKLIQTTYVK 53
           +H QN FK+I++T  K
Sbjct: 40  NHIQNIFKIIKSTNEK 55


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/46 (23%), Positives = 24/46 (52%)
 Frame = -2

Query: 233 DLN*SETLNKHLVAYFQYPLINNVTNLCLRRNYLEIVKDYLSLQAS 96
           D+N  ET+ + L  Y+Q  ++  V    L   ++++ KD + +  +
Sbjct: 508 DMN-YETMGRALRYYYQRGILAKVDGQRLVYQFVDVPKDIIEIDCT 552


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 612 HDRHPVSAGTDFPAIYSNTKYR 547
           HD     A   FP++YS T+ R
Sbjct: 183 HDASNFIAMETFPSVYSKTRRR 204


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,569
Number of Sequences: 438
Number of extensions: 4068
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)