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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30142.Seq
         (600 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    24   0.99 
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    24   0.99 
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    24   1.3  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    24   1.3  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    24   1.3  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    24   1.3  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   5.3  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   7.0  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    21   9.2  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    21   9.2  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    21   9.2  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    21   9.2  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   9.2  

>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 355 NSLQNYVC*NNKYIHTYKENNFDD 284
           +SL N    NN Y + Y  NN+++
Sbjct: 82  SSLSNNTIHNNNYKYNYNNNNYNN 105


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 355 NSLQNYVC*NNKYIHTYKENNFDD 284
           +SL N    NN Y + Y  NN+++
Sbjct: 82  SSLSNNTIHNNNYKYNYNNNNYNN 105


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 355 NSLQNYVC*NNKYIHTYKENNFD 287
           +SL N    NN Y + Y  NN++
Sbjct: 83  SSLSNNTIHNNNYKYNYNNNNYN 105


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 355 NSLQNYVC*NNKYIHTYKENNFD 287
           +SL N    NN Y + Y  NN++
Sbjct: 83  SSLSNNTIHNNNYKYNYNNNNYN 105


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 355 NSLQNYVC*NNKYIHTYKENNFD 287
           +SL N    NN Y + Y  NN++
Sbjct: 83  SSLSNNTIHNNNYKYNYNNNNYN 105


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 355 NSLQNYVC*NNKYIHTYKENNFD 287
           +SL N    NN Y + Y  NN++
Sbjct: 83  SSLSNNTIHNNNYKYNYNNNNYN 105


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 380 KIYIYTLTRHIYRGN*FNVHKFSHVRFV 463
           K YIYT+  ++ +   F+VH     R++
Sbjct: 44  KAYIYTIKSNMAKTLQFDVHMMLQFRYL 71


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 69  FNHYTSFY*ANYLSLHYSL 125
           +N+Y + Y  NY  L+Y++
Sbjct: 337 YNNYNNNYNNNYKKLYYNI 355


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 328 NNKYIHTYKENNFDD 284
           NN Y + Y  NN+++
Sbjct: 93  NNNYKYNYNNNNYNN 107


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 328 NNKYIHTYKENNFDD 284
           NN Y + Y  NN+++
Sbjct: 93  NNNYKYNYNNNNYNN 107


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 328 NNKYIHTYKENNFDD 284
           NN Y + Y  NN+++
Sbjct: 93  NNNYKYNYNNNNYNN 107


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 328 NNKYIHTYKENNFDD 284
           NN Y + Y  NN+++
Sbjct: 93  NNNYKYNYNNNNYNN 107


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 328 NNKYIHTYKENNFDD 284
           NN Y + Y  NN+++
Sbjct: 326 NNNYKYNYNNNNYNN 340


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,105
Number of Sequences: 438
Number of extensions: 2685
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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