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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30132.Seq
         (689 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.2  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    23   3.6  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +2

Query: 404  ASALDAFK*STRITKLKLTSRPSIVTVPSAIFATRSIVQHP 526
            A+ +D  K +TR T   +   P+  +VPSA    R+  Q P
Sbjct: 966  AALIDELKPATRYTIRVIAEGPAGRSVPSAELIVRTEPQRP 1006


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +2

Query: 404  ASALDAFK*STRITKLKLTSRPSIVTVPSAIFATRSIVQHP 526
            A+ +D  K +TR T   +   P+  +VPSA    R+  Q P
Sbjct: 962  AALIDELKPATRYTIRVIAEGPAGRSVPSAELIVRTEPQRP 1002


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = -1

Query: 311 WAQFVWTDGHSPLNRSSTCA*SIHCRIRARRTSSPPTELF 192
           W   +WTD H   N S      +  R+   R   P T L+
Sbjct: 57  WVTQIWTDHHLKWNASEFAGIRV-IRVPYNRVWRPDTILY 95


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,604
Number of Sequences: 438
Number of extensions: 4140
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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