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Last updated: 2022/09/19
 
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_B13
         (639 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    24   1.1  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     24   1.1  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -2

Query: 98  LELKXLKM-FQLFLIKYQKIKYNVPI 24
           ++L  +++ FQ+FL   QK K+NVP+
Sbjct: 181 IDLNAVRLCFQVFLEGSQKRKFNVPL 206


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -2

Query: 98  LELKXLKM-FQLFLIKYQKIKYNVPI 24
           ++L  +++ FQ+FL   QK K+NVP+
Sbjct: 181 IDLNAVRLCFQVFLEGSQKRKFNVPL 206


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,470
Number of Sequences: 438
Number of extensions: 2420
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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