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Last updated: 2022/09/19
 
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_A09
         (627 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    22   5.6  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    22   5.6  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    22   5.6  

>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +2

Query: 131 ILSSSRDKTLIV---WKLTRDENNYGIPQKRLYGHSHFISDV 247
           I+SS  +KT+     +K   + NNY    K+LY + ++I  +
Sbjct: 81  IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQI 122


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +2

Query: 131 ILSSSRDKTLIV---WKLTRDENNYGIPQKRLYGHSHFISDV 247
           I+SS  +KT+     +K   + NNY    K+LY + ++I  +
Sbjct: 81  IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQI 122


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +2

Query: 131 ILSSSRDKTLIV---WKLTRDENNYGIPQKRLYGHSHFISDV 247
           I+SS  +KT+     +K   + NNY    K+LY + ++I  +
Sbjct: 81  IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQI 122


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,687
Number of Sequences: 438
Number of extensions: 3818
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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