Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0184
         (772 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    23   3.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   3.1  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   5.5  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   7.3  

>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 85  NNNIEYDQYVEQTRIRRTPHEI 150
           N N ++D  V+Q  I   P E+
Sbjct: 81  NGNFDFDMIVKQLEITMPPEEV 102


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 641 NITEFGVDNSSTLKDALEEEMVIDNEKHKL 730
           N  E   DNS  + D  EE  ++D  ++ L
Sbjct: 76  NQLEIESDNSKEVNDKKEENFIVDRLRNDL 105


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 584 ILPKKVEYVHRKLYFEIE 531
           I P++ E +HR +YF+ E
Sbjct: 331 ISPEQEELIHRLVYFQNE 348


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 698 LLPKHLSVYLNYQHQIPLYFLN 633
           L  K +++Y  YQ  +P+Y  N
Sbjct: 437 LYKKVMNLYQQYQQSLPVYQYN 458


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,550
Number of Sequences: 438
Number of extensions: 4603
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)