Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0121
         (734 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    25   0.98 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.2  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   6.9  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    22   6.9  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 466 FPTSGAVDHNQCESHGTHCNHRTHIRIM 383
           +PT   + HN  ++    CN   H+RI+
Sbjct: 203 WPTGRGIYHNDDKTFLVWCNEEDHLRII 230


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/44 (25%), Positives = 17/44 (38%)
 Frame = -2

Query: 616 PQQLLAEGNATGLRNQGMDLTQVTQIASCRQNGDSKVEDLKTEE 485
           P  ++A  NAT     G       ++   RQN     +D   +E
Sbjct: 241 PSAVVATSNATAAMTTGTTTIPTRRLRKRRQNDGEGADDRDDDE 284


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 439 NQCESHGTHCNH 404
           NQC++   HC+H
Sbjct: 34  NQCQAVNGHCSH 45


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 439 NQCESHGTHCNH 404
           NQC++   HC+H
Sbjct: 34  NQCQAVNGHCSH 45


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,855
Number of Sequences: 438
Number of extensions: 3821
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)