Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120070X.Seq
         (534 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    22   3.4  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   3.4  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   6.0  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   7.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   7.9  

>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -1

Query: 186 RSQGQADFVGCLCHELGIYLIWVK 115
           ++ G  + VGC+C +     +W K
Sbjct: 69  KAGGHCEKVGCICRKTSFKDLWDK 92


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = +3

Query: 66  GSPSGNRHQQFPSQASTLPISGKFQAHDINNQ 161
           G P G    Q PSQ    P SG  Q   +  Q
Sbjct: 49  GGPPGAPPSQNPSQMMISPASGIHQMQQLLQQ 80


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +3

Query: 24  AWLSRQHHPPRRHGGSPSGNRHQQFPSQASTLP 122
           ++ +  + P  R+GG    ++HQQ    A  +P
Sbjct: 3   SYFANSYIPDLRNGGVEHPHQHQQHYGAAVQVP 35


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 325 PSSCKILIPYSSSMAFTSLVDTLANTIHRDAI 420
           PS+  ILI Y   + F SLV     TI  D +
Sbjct: 12  PSTSFILINYFIFLYFNSLVRFRRFTIELDKV 43


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 39  QHHPPRRHGGSPSGNRHQ 92
           QHHP + H    S   HQ
Sbjct: 320 QHHPSQYHPHRGSSPHHQ 337


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,030
Number of Sequences: 438
Number of extensions: 2716
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)