Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021114
         (695 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   2.8  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   4.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   4.8  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    21   8.5  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    21   8.5  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    21   8.5  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    21   8.5  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    21   8.5  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    21   8.5  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    21   8.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   8.5  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   8.5  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   8.5  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   8.5  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   8.5  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   8.5  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   8.5  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   8.5  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    21   8.5  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   8.5  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 15/41 (36%), Positives = 17/41 (41%)
 Frame = +1

Query: 70  RPDVGQLQLVALARRVPDRGAVPGHAPRAREVLAHRPGGQR 192
           RPD   L +  L    PD+    G   RARE     P G R
Sbjct: 136 RPDTKDLPVPPLTEVFPDKYMDSGIFSRAREEANVVPEGAR 176


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +1

Query: 247 DQQSLLALKECIRAL-GMKGNNHLPFRVSKLTQVLRDSFIGDKSRTCMIA 393
           D+ + L L+E   A   ++   +  +++ +L + L  SF+G K + C+I+
Sbjct: 384 DETNQLTLQETADAFKDLQDKYYEEYKMYELGE-LASSFVGPKVKDCLIS 432


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2

Query: 181 QVDERELPVHAVHARGPHHDL 119
           QVDERE P    H  G   D+
Sbjct: 696 QVDEREYPESHGHDSGQDEDM 716


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 441 PIRRQGEGARHHGPV 485
           P+R Q  G+RH GP+
Sbjct: 111 PMRGQVPGSRHIGPL 125


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 441 PIRRQGEGARHHGPV 485
           P+R Q  G+RH GP+
Sbjct: 111 PMRGQVPGSRHIGPL 125


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 441 PIRRQGEGARHHGPV 485
           P+R Q  G+RH GP+
Sbjct: 111 PMRGQVPGSRHIGPL 125


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 441 PIRRQGEGARHHGPV 485
           P+R Q  G+RH GP+
Sbjct: 111 PMRGQVPGSRHIGPL 125


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 441 PIRRQGEGARHHGPV 485
           P+R Q  G+RH GP+
Sbjct: 111 PMRGQVPGSRHIGPL 125


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 441 PIRRQGEGARHHGPV 485
           P+R Q  G+RH GP+
Sbjct: 111 PMRGQVPGSRHIGPL 125


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 441 PIRRQGEGARHHGPV 485
           P+R Q  G+RH GP+
Sbjct: 111 PMRGQVPGSRHIGPL 125


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -1

Query: 314 RWLLPFMPSARMHSFSARRDC*SPRFPFWSVGW 216
           RW+L     A      AR +C +  FP   V W
Sbjct: 680 RWILEPTDKAFAQGSDARVECKADGFPKPQVTW 712


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 441 PIRRQGEGARHHGPV 485
           P+R Q  G+RH GP+
Sbjct: 360 PMRGQVPGSRHIGPL 374


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 441 PIRRQGEGARHHGPV 485
           P+R Q  G+RH GP+
Sbjct: 360 PMRGQVPGSRHIGPL 374


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 441 PIRRQGEGARHHGPV 485
           P+R Q  G+RH GP+
Sbjct: 360 PMRGQVPGSRHIGPL 374


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 441 PIRRQGEGARHHGPV 485
           P+R Q  G+RH GP+
Sbjct: 360 PMRGQVPGSRHIGPL 374


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 441 PIRRQGEGARHHGPV 485
           P+R Q  G+RH GP+
Sbjct: 360 PMRGQVPGSRHIGPL 374


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 441 PIRRQGEGARHHGPV 485
           P+R Q  G+RH GP+
Sbjct: 360 PMRGQVPGSRHIGPL 374


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 441 PIRRQGEGARHHGPV 485
           P+R Q  G+RH GP+
Sbjct: 359 PMRGQVPGSRHIGPL 373


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 441 PIRRQGEGARHHGPV 485
           P+R Q  G+RH GP+
Sbjct: 344 PMRGQVPGSRHIGPL 358


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 441 PIRRQGEGARHHGPV 485
           P+R Q  G+RH GP+
Sbjct: 360 PMRGQVPGSRHIGPL 374


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,398
Number of Sequences: 438
Number of extensions: 2884
Number of successful extensions: 26
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)