Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021055
         (672 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   1.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   1.5  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   3.5  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   4.6  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   8.1  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 435 FIRRRTSRGGSCSLVGRN*RLPAKHCPTFRFRYG 536
           ++ R ++  G  S V  +  +P  + PT RFR G
Sbjct: 270 YLERLSNDMGEVSYVSLDHPIPTGYYPTMRFRNG 303


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 435 FIRRRTSRGGSCSLVGRN*RLPAKHCPTFRFRYG 536
           ++ R ++  G  S V  +  +P  + PT RFR G
Sbjct: 270 YLERLSNDMGEVSYVSLDHPIPTGYYPTMRFRNG 303


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 422 TVSASHPT*RTCVFIRG 372
           T   +HP  R CVF+ G
Sbjct: 167 TAHVTHPRHRLCVFVAG 183


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 197 TSCTTILPSEASRSLAGYYI 138
           T+CT I+ + A ++   YY+
Sbjct: 60  TTCTVIIKNPAMQTATNYYL 79


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 386 HKCVMSGETPIQSG 427
           HKC +  +T IQSG
Sbjct: 176 HKCTVCSKTFIQSG 189


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,060
Number of Sequences: 438
Number of extensions: 4496
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)