Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_E01
         (396 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91509-1|CAA62809.1|  103|Apis mellifera histone H4 protein.           23   1.7  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   3.9  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   6.8  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   6.8  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    20   9.0  

>X91509-1|CAA62809.1|  103|Apis mellifera histone H4 protein.
          Length = 103

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +2

Query: 218 KGLSKGKHGFHVHEFGDNTNGCT 286
           KGL KG    H    GDN  G T
Sbjct: 9   KGLGKGGAKRHRKVLGDNIQGIT 31


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 309 GLK*APAEVQPLVLSPN 259
           GL+ A A VQP V+S N
Sbjct: 572 GLRVADASVQPQVISGN 588


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -2

Query: 395 HHHHWKLQY 369
           HH HW L Y
Sbjct: 208 HHWHWHLVY 216


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +2

Query: 335 DSDTRHIGDLGNIEASSD 388
           DSD   IGDL  I A  D
Sbjct: 42  DSDGDGIGDLNGITARMD 59


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 200 VVSGEVKGLSKGKHGFHVHEFGDNT 274
           V SGE   +   K GFH+  + +N+
Sbjct: 191 VHSGEEVNIFLDKKGFHMDGYTNNS 215


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,545
Number of Sequences: 438
Number of extensions: 2012
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9761793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)