Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_B18
         (639 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    23   3.3  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    23   3.3  
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            22   4.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   5.8  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   5.8  

>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -3

Query: 406 TVAQPKPDGTESDDQISWTSLSEGGGQLMT 317
           TV QP+P    S +   WT  S  G    T
Sbjct: 29  TVLQPRPSFELSKNGDEWTFTSSSGDNTYT 58


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -3

Query: 406 TVAQPKPDGTESDDQISWTSLSEGGGQLMT 317
           TV QP+P    S +   WT  S  G    T
Sbjct: 31  TVLQPRPSFELSKNGDEWTFTSSSGDNTYT 60


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 178 HQLTKPRRKRFASCNNMRI 234
           HQL K RRK+  + N M I
Sbjct: 4   HQLKKKRRKKNLNQNQMMI 22


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 26 FRLGEGTARSSQARGSPQSRYIY 94
          F  G G     QARG+PQ   I+
Sbjct: 15 FSNGTGAVVECQARGNPQPDIIW 37


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 160 SRPKSRAALAIFWLCSWSAGDP 95
           SR ++   +AI W+CS +   P
Sbjct: 159 SRRRAAVLIAIVWICSSAISFP 180


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,687
Number of Sequences: 438
Number of extensions: 4078
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)