Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_C13
         (587 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    26   0.32 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    26   0.32 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   5.1  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   9.0  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 440 WCRTGSPEISPDTSTRVAVDTTATP 514
           W + G  E++P T+ RV V    TP
Sbjct: 841 WLKGGKIELNPSTNYRVTVKREVTP 865


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 440 WCRTGSPEISPDTSTRVAVDTTATP 514
           W + G  E++P T+ RV V    TP
Sbjct: 837 WLKGGKIELNPSTNYRVTVKREVTP 861


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 452 GSPEISPDTSTRVAVDTTATPV 517
           G P ISPD+   V +D   T V
Sbjct: 744 GKPTISPDSRHLVTLDKQETGV 765


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 495 LTRLQHRLNATGECCQQ 545
           L  LQH LN   + C+Q
Sbjct: 316 LPELQHNLNILVDMCEQ 332


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,866
Number of Sequences: 438
Number of extensions: 2558
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)