Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20180
(793 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g25340.1 68417.m03647 immunophilin-related / FKBP-type peptid... 93 3e-19
At5g05420.1 68418.m00584 immunophilin, putative / FKBP-type pept... 84 1e-16
At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase, pu... 76 2e-14
At3g55520.1 68416.m06165 immunophilin, putative / FKBP-type pept... 74 9e-14
At5g48580.1 68418.m06009 FK506-binding protein 2-2 (FKBP15-2) / ... 74 1e-13
At3g25230.1 68416.m03152 peptidyl-prolyl cis-trans isomerase / F... 70 2e-12
At3g25220.1 68416.m03150 FK506-binding protein 2-1 (FKBP15-1) / ... 68 6e-12
At3g12340.1 68416.m01538 immunophilin, putative / FKBP-type pept... 67 1e-11
At3g10060.1 68416.m01206 immunophilin, putative / FKBP-type pept... 63 2e-10
At5g64350.1 68418.m08082 FK506-binding protein (FKBP12) / immuno... 59 4e-09
At5g45680.1 68418.m05616 FK506-binding protein 1 (FKBP13) identi... 59 4e-09
At2g43560.1 68415.m05412 immunophilin / FKBP-type peptidyl-proly... 56 2e-08
At5g13410.1 68418.m01544 immunophilin / FKBP-type peptidyl-proly... 46 4e-05
At4g19830.1 68417.m02907 immunophilin / FKBP-type peptidyl-proly... 46 4e-05
At1g20810.1 68414.m02606 immunophilin / FKBP-type peptidyl-proly... 45 5e-05
At1g18170.1 68414.m02258 immunophilin / FKBP-type peptidyl-proly... 45 7e-05
At4g39710.1 68417.m05620 immunophilin, putative / FKBP-type pept... 43 2e-04
At3g60370.1 68416.m06752 immunophilin / FKBP-type peptidyl-proly... 42 4e-04
At1g73655.1 68414.m08529 immunophilin / FKBP-type peptidyl-proly... 41 0.001
At3g21640.1 68416.m02729 FKBP-type peptidyl-prolyl cis-trans iso... 36 0.031
At4g26555.1 68417.m03826 immunophilin / FKBP-type peptidyl-proly... 34 0.094
At1g72830.2 68414.m08422 CCAAT-binding transcription factor (CBF... 31 0.88
At1g72830.1 68414.m08421 CCAAT-binding transcription factor (CBF... 31 0.88
At3g09000.1 68416.m01053 proline-rich family protein 29 3.5
At2g27630.1 68415.m03350 ubiquitin carboxyl-terminal hydrolase-r... 29 3.5
At5g20200.1 68418.m02406 nucleoporin-related contains weak simil... 29 4.7
At3g54010.2 68416.m05972 peptidyl-prolyl cis-trans isomerase, pu... 28 6.2
At3g54010.1 68416.m05971 peptidyl-prolyl cis-trans isomerase, pu... 28 6.2
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 28 6.2
At1g04445.1 68414.m00436 zinc finger (C2H2 type) family protein ... 28 6.2
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 28 8.2
>At4g25340.1 68417.m03647 immunophilin-related / FKBP-type
peptidyl-prolyl cis-trans isomerase-related immunophilin
FKBP46 - Spodoptera frugiperda (fall
armyworm),PIR2:A55320
Length = 477
Score = 92.7 bits (220), Expect = 3e-19
Identities = 43/73 (58%), Positives = 52/73 (71%)
Frame = +3
Query: 255 KMFDNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPN 434
K+FD+ + FKFRLG VI GWDVGV+GM+VG KRK+ PP M YG KG+ IPPN
Sbjct: 405 KIFDSNIGKSPFKFRLGIGSVIKGWDVGVNGMRVGDKRKLTIPPSMGYGVKGAGGQIPPN 464
Query: 435 STLVFEVELKNVK 473
S L F+VEL NV+
Sbjct: 465 SWLTFDVELINVQ 477
Score = 34.3 bits (75), Expect = 0.094
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +1
Query: 127 EKKEKKALSGGVQIEDLKLG--NGPVAKPGKVVMVYYEGRLKQNKK 258
+ + + G+ +E+L +G NG A PGK V V Y G+L++N K
Sbjct: 360 KSSQVRTYPNGLIVEELSMGKPNGKRADPGKTVSVRYIGKLQKNGK 405
>At5g05420.1 68418.m00584 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative contains
similarity to peptidyl-prolyl cis-trans isomerase
Length = 143
Score = 83.8 bits (198), Expect = 1e-16
Identities = 42/73 (57%), Positives = 54/73 (73%)
Frame = +3
Query: 255 KMFDNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPN 434
K+FD+ + +KFRL A +VI G DVG++GM VGGKRK+ PP M YGA+G+ IPP+
Sbjct: 72 KIFDSTVGKSRYKFRLDAGKVIKGLDVGLNGMLVGGKRKLTIPPEMGYGAEGAGS-IPPD 130
Query: 435 STLVFEVELKNVK 473
S LVF+VEL NVK
Sbjct: 131 SWLVFDVELLNVK 143
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Frame = +1
Query: 157 GVQIEDLKLGN--GPVAKPGKVVMVYYEGRLKQNKK 258
G+ +E+L +GN G A+PGK V V+Y G+L+ N K
Sbjct: 37 GLIVEELCMGNPNGKKAEPGKRVSVHYTGKLQGNGK 72
>At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase,
putative / FK506-binding protein, putative similar to
rof1 [Arabidopsis thaliana] GI:1373396
Length = 578
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/62 (54%), Positives = 40/62 (64%)
Frame = +3
Query: 276 KGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEV 455
+G FKF LG VI GWD+G+ MK G PP +AYG GSPP IPPN+TL F+V
Sbjct: 88 RGTPFKFTLGQGHVIKGWDLGIKTMKKGENAIFTIPPELAYGETGSPPTIPPNATLQFDV 147
Query: 456 EL 461
EL
Sbjct: 148 EL 149
Score = 47.6 bits (108), Expect = 9e-06
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Frame = +3
Query: 288 FKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSP---PVIPPNSTLVFEVE 458
F+F++ ++VI G + V GMK G I P A+G+ S VIPPNST+ +EVE
Sbjct: 329 FEFKIDEEQVIEGLEKAVMGMKKGEVALITISPEYAFGSSESKQELAVIPPNSTVYYEVE 388
Query: 459 L 461
L
Sbjct: 389 L 389
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 6/72 (8%)
Frame = +3
Query: 276 KGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPP------VIPPNS 437
K G +F + V MK G K + P +G G P IPPN+
Sbjct: 200 KSDGVEFTVKEGHFCPALSKAVKTMKRGEKVLLTVKPQYGFGEFGRPASDGLQAAIPPNA 259
Query: 438 TLVFEVELKNVK 473
TL ++EL + K
Sbjct: 260 TLQIDLELVSWK 271
>At3g55520.1 68416.m06165 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative POSSIBLE
PEPTIDYL-PROLYL CIS-TRANS ISOMERASE) (EC 5.2.1.8)
(PPIASE) (ROTAMASE) SP:P30416(Mouse);P59 PROTEIN (HSP
BINDING IMMUNOPHILIN), rabbit,
SWISSPROT:P27124:FKB4_RABBIT
Length = 190
Score = 74.1 bits (174), Expect = 9e-14
Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +3
Query: 252 QKMFDNCLKGP-GFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIP 428
+K+FD + F F LG VI WD+ + MKVG KI C P AYG GSPP IP
Sbjct: 47 EKVFDTTREDNLVFSFELGTGSVIRSWDIALKTMKVGEVAKITCKPEYAYGRAGSPPDIP 106
Query: 429 PNSTLVFEVEL 461
P++TL+FEVEL
Sbjct: 107 PDATLIFEVEL 117
>At5g48580.1 68418.m06009 FK506-binding protein 2-2 (FKBP15-2) /
immunophilin / peptidyl-prolyl cis-trans isomerase /
rotamase identical to SP|Q38936| FK506-binding protein
2-2 precursor (EC 5.2.1.8);
Length = 163
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +3
Query: 246 TKQKMFDNCL-KGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPV 422
T +FD+ +G F+F+LG+ +VI GWD G+ G VG KRK+ P + YG +GSPP
Sbjct: 64 TDGTVFDSSFERGDPFEFKLGSGQVIKGWDQGLLGACVGEKRKLKIPAKLGYGEQGSPPT 123
Query: 423 IPPNSTLVFEVEL 461
IP +TL+F+ EL
Sbjct: 124 IPGGATLIFDTEL 136
>At3g25230.1 68416.m03152 peptidyl-prolyl cis-trans isomerase /
FK506-binding protein (ROF1) identical to rotamase FKBP
(ROF1) GB:U49453 [Arabidopsis thaliana] (Mol. Gen.
Genet. 252 (5), 510-517 (1996))
Length = 551
Score = 70.1 bits (164), Expect = 2e-12
Identities = 31/58 (53%), Positives = 37/58 (63%)
Frame = +3
Query: 288 FKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVEL 461
FKF LG +VI GWD+G+ MK G P +AYG GSPP IP N+TL F+VEL
Sbjct: 84 FKFTLGQGQVIKGWDIGIKTMKKGENAVFTIPAELAYGESGSPPTIPANATLQFDVEL 141
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +3
Query: 288 FKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSP---PVIPPNSTLVFEVE 458
F+F+ ++V+ G D V MK G + P A+G+ S V+PPNST+ +EV+
Sbjct: 319 FEFKTDEEQVVDGLDRAVMKMKKGEVALVTIDPEYAFGSNESQQELAVVPPNSTVTYEVD 378
Query: 459 L 461
L
Sbjct: 379 L 379
Score = 31.1 bits (67), Expect = 0.88
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Frame = +3
Query: 276 KGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPP-----VIPPNST 440
K G +F + V MK G K + P +G KG P +PPN+T
Sbjct: 192 KSDGVEFTVKDGHFCPALTKAVKTMKKGEKVLLTVKPQYGFGEKGKPASAGEGAVPPNAT 251
Query: 441 LVFEVELKNVK 473
L +EL + K
Sbjct: 252 LEINLELVSWK 262
>At3g25220.1 68416.m03150 FK506-binding protein 2-1 (FKBP15-1) /
immunophilin / peptidyl-prolyl cis-trans isomerase /
rotamase identical to SP|Q38935 FK506-binding protein
2-1 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis- trans
isomerase) (PPiase) (Rotamase) (15 kDa FKBP) (FKBP-15-1)
{Arabidopsis thaliana}, immunophilin (FKBP15-1)
GB:U52046 [Arabidopsis thaliana] (Proc. Natl. Acad. Sci.
U.S.A. 93 (14), 6964-6969 (1996))
Length = 153
Score = 68.1 bits (159), Expect = 6e-12
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +3
Query: 246 TKQKMFDNCL-KGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPV 422
T +FD+ +G +F LG +VI GWD G+ G VG KRK+ P + YG GSPP
Sbjct: 64 TDGTVFDSSFERGDPIEFELGTGQVIPGWDQGLLGACVGEKRKLKIPSKLGYGDNGSPPK 123
Query: 423 IPPNSTLVFEVEL 461
IP +TL+F+ EL
Sbjct: 124 IPGGATLIFDTEL 136
>At3g12340.1 68416.m01538 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative contains
Pfam profile: PF00254, FKBP-type peptidyl-prolyl
cis-trans isomerases
Length = 694
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/72 (40%), Positives = 45/72 (62%)
Frame = +3
Query: 258 MFDNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNS 437
+FD+ L +FRLG + VI G +GV GM+VG KR++I PP + Y +G +P ++
Sbjct: 623 LFDSNLGEDPLRFRLGGENVIEGLSIGVEGMRVGDKRRLIIPPALGYSKRGLKEKVPKSA 682
Query: 438 TLVFEVELKNVK 473
LV+EVE ++
Sbjct: 683 WLVYEVEAVKIR 694
>At3g10060.1 68416.m01206 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative
Pfam:PF-254: FKBP-type peptidyl-prolyl cis-trans
isomerases
Length = 230
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Frame = +3
Query: 279 GPGFKFRLGAKE---VISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVF 449
G + F +G E V+ G D+GV GM+VGG+R +I PP +AYG KG IPPN+T+
Sbjct: 151 GTPYGFDVGQSERGNVLKGLDLGVEGMRVGGQRLVIVPPELAYGKKGVQE-IPPNATIEL 209
Query: 450 EVELKNVK 473
++EL ++K
Sbjct: 210 DIELLSIK 217
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 148 LSGGVQIEDLKLGNGPVAKPGKVVMVYYEGRLK 246
L G++ D+K+GNG A G V V+Y + K
Sbjct: 103 LPNGLKYYDIKVGNGAEAVKGSRVAVHYVAKWK 135
>At5g64350.1 68418.m08082 FK506-binding protein (FKBP12) /
immunophilin identical to immunophilin (GI:2104957)
[Arabidopsis thaliana]
Length = 112
Score = 58.8 bits (136), Expect = 4e-09
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +3
Query: 288 FKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPP-VIPPNSTLVFEVELK 464
F F++G VI GWD GV GM++G ++ C AYGA G P I PNS L FE+E+
Sbjct: 50 FSFQIGKGAVIKGWDEGVIGMQIGEVARLRCSSDYAYGAGGFPAWGIQPNSVLDFEIEVL 109
Query: 465 NVK 473
+V+
Sbjct: 110 SVQ 112
>At5g45680.1 68418.m05616 FK506-binding protein 1 (FKBP13) identical
to Probable FKBP-type peptidyl-prolyl cis-trans
isomerase 3, chloroplast precursor (Ppiase) (Rotamase)
(SP:Q9SCY2) / FK506 binding protein 1 (GI:21535744)
[Arabidopsis thaliana]; contains Pfam PF00254:
peptidyl-prolyl cis-trans isomerase, FKBP-type
Length = 208
Score = 58.8 bits (136), Expect = 4e-09
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 12/80 (15%)
Frame = +3
Query: 255 KMFDNCL-KGPGFKFRLGAKEVISGWDVGVSG------MKVGGKRKIICPPGMAY----- 398
K+FD+ +G FR+G EVI GWD G+ G M GGKR + PP +AY
Sbjct: 124 KVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRGA 183
Query: 399 GAKGSPPVIPPNSTLVFEVE 458
G KG +IPP S L+F++E
Sbjct: 184 GCKGGSCLIPPASVLLFDIE 203
>At2g43560.1 68415.m05412 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein identical to Probable
FKBP-type peptidyl-prolyl cis-trans isomerase 2,
chloroplast precursor (Ppiase) (Rotamase)
(SP:O22870)[Arabidopsis thaliana]; contains Pfam
PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type
Length = 223
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Frame = +3
Query: 255 KMFDNCL-KGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAY--GAKGSP--P 419
++FD+ L KG + FR+G+ +VI G D G+ MK GGKR++ P +A+ G +P P
Sbjct: 139 QIFDSSLEKGLPYLFRVGSGQVIKGLDEGILSMKAGGKRRLYIPGPLAFPKGLVSAPGRP 198
Query: 420 VIPPNSTLVFEVELK 464
+ PNS ++F+V L+
Sbjct: 199 RVAPNSPVIFDVSLE 213
>At5g13410.1 68418.m01544 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein SP:Q9LYR5; similar to
FK506-binding protein (Peptidyl-prolyl cis-trans
isomerase) (PPiase) (Rotamase) (SP:P25138) [{Neisseria
meningitidis]; peptidyl-prolyl cis-trans isomerase,
Spodoptera frugiperda, EMBL:SF15038; contains Pfam
PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type
Length = 256
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +3
Query: 288 FKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAY 398
FKF LG+ EVI ++ VSGM +GG R+II PP + Y
Sbjct: 173 FKFTLGSNEVIPAFEEAVSGMALGGIRRIIVPPELGY 209
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +1
Query: 157 GVQIEDLKLGNGPVAKPGKVVMVYYEG 237
G+Q +DL++G GP+AK G V+V ++G
Sbjct: 118 GLQYKDLRVGTGPIAKKGDKVVVDWDG 144
>At4g19830.1 68417.m02907 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein similar to 70 kDa
peptidylprolyl isomerase (Peptidylprolyl cis-trans
isomerase) (PPiase) (Rotamase) (SP:Q43207) [Triticum
aestivum]; FKBP-type peptidyl-prolyl cis-trans
isomerase,Synechocystis sp., PIR2:S75144; contains Pfam
PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type
Length = 229
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/49 (42%), Positives = 28/49 (57%)
Frame = +3
Query: 288 FKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPN 434
F F LG+ +VI G + V MKVGG R+++ PP Y P +PPN
Sbjct: 140 FTFVLGSSKVIPGIETAVRSMKVGGIRRVVIPPSQGYQNTSQEP-LPPN 187
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 151 SGGVQIEDLKLGNGPVAKPGKVVMVYYEGRL 243
SGGV+ DL++G+G V G + ++Y GRL
Sbjct: 86 SGGVKALDLRIGDGDVPIEGDQIEIHYYGRL 116
>At1g20810.1 68414.m02606 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein identical to Probable
FKBP-type peptidyl-prolyl cis-trans isomerase 1,
chloroplast precursor (Ppiase) (Rotamase)
(SP:Q9LM71)[Arabidopsis thaliana]; similar to SP|P25138
FK506-binding protein (Peptidyl-prolyl cis-trans
isomerase) (PPiase) (EC 5.2.1.8) (Rotamase) {Neisseria
meningitidis}; contains Pfam PF00254: peptidyl-prolyl
cis-trans isomerase, FKBP-type
Length = 232
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = +3
Query: 345 GMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 470
GMKVGGKR +I PP YG KG IPP +T +EL V
Sbjct: 185 GMKVGGKRTVIVPPEAGYGQKGMNE-IPPGATFELNIELLRV 225
Score = 31.1 bits (67), Expect = 0.88
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +1
Query: 157 GVQIEDLKLGNGPVAKPGKVVMVYYEGRLKQNKKCLTTASRDLDSSSVLAQKRSLAAG 330
G++ D++ G GPVA G V+++ R + T S+ L + +AQ G
Sbjct: 91 GLKFYDIEEGKGPVATEGSTAQVHFDCRYRSITAISTRESKLLAGNRSIAQPYEFKVG 148
>At1g18170.1 68414.m02258 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein similar to
(Peptidyl-prolyl cis-trans isomerase) (PPiase)
(Rotamase) (SP:Q26486) [Spodoptera frugiperda]; contains
Pfam profile: PF00254 FKBP-type peptidyl-prolyl
cis-trans isomerases
Length = 247
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +3
Query: 306 AKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKG----SPPVIPPNSTLVFEVELKNV 470
+K + G D + MK GGKR++I PP + +G G S IPPN++L + VE+ V
Sbjct: 184 SKGLCEGIDYVLRSMKAGGKRRVIVPPSLGFGVDGAELESGLQIPPNASLEYIVEIDRV 242
>At4g39710.1 68417.m05620 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative similar to
FK506 binding protein 1 (GP:21535744) [Arabidopsis
thaliana]
Length = 217
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Frame = +3
Query: 258 MFDNCLK-GPGFKFRLGAKEVISGWDVGVSG------MKVGGKRKIICPPGMAYGAK--- 407
+FD+ K R+G +VI G D G+ G M+VGGKRK+ PP +AYG +
Sbjct: 128 LFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMRVGGKRKLQIPPKLAYGPEPAG 187
Query: 408 --GSPPVIPPNSTLVFEVELKNV 470
IP N+TL++++ +
Sbjct: 188 CFSGDCNIPGNATLLYDINFVEI 210
>At3g60370.1 68416.m06752 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein SP:Q9M222; similar to
FKBP-type peptidyl-prolyl cis-trans isomerase fkpA
precursor (PPiase) (Rotamase)(SP:Q8X880) [Escherichia
coli O157:H7] ; contains Pfam PF00254: peptidyl-prolyl
cis-trans isomerase, FKBP-type
Length = 242
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +3
Query: 273 LKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFE 452
++G + R+G ++ G+++G+ MK GG+R+II PP + G VF+
Sbjct: 160 IQGSPARIRMGTNALVPGFEMGIRDMKPGGRRRIIIPPELG-PPVGPSTFFSSKQFEVFD 218
Query: 453 VELKNVK 473
VEL +++
Sbjct: 219 VELLSIQ 225
>At1g73655.1 68414.m08529 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein similar to
(Peptidyl-prolyl cis-trans isomerase) (PPiase)
(Rotamase) (SP:Q26486) [Spodoptera frugiperda]; contains
Pfam PF00254: peptidyl-prolyl cis-trans isomerase,
FKBP-type
Length = 234
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +3
Query: 306 AKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAK----GSPPVIPPNSTLVFEVELKNV 470
+K + G + + MK GGKRK+I PP + +G + G IPP++TL + +E+ V
Sbjct: 169 SKGLCQGIEHVLRSMKAGGKRKVIIPPSLGFGDRNVEFGQGLEIPPSATLDYIIEVDTV 227
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +1
Query: 124 IEKKEKKALSGGVQIEDLKLGNGPVAKPGKVVMVYYEGRL 243
+EK+E+ L G++ DL++G+G G +V+ +G++
Sbjct: 102 LEKQEEIILPNGIRYYDLQVGSGATPSSGYLVVFDVKGQV 141
>At3g21640.1 68416.m02729 FKBP-type peptidyl-prolyl cis-trans
isomerase family protein similar to rof1 [Arabidopsis
thaliana] GI:1354207; contains Pfam profile: PF00254
FKBP-type peptidyl-prolyl cis-trans isomerases
Length = 365
Score = 35.9 bits (79), Expect = 0.031
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = +3
Query: 309 KEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKG--SPPVIPPNSTLVFEVEL 461
K+ ++G +GV+ MK G + + +AYG +G S P +PP + L++EVE+
Sbjct: 103 KKELAGLAIGVASMKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEV 155
>At4g26555.1 68417.m03826 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein similar to
FK506-binding protein (Peptidyl-prolyl cis-trans
isomerase) (PPiase) (Rotamase) (SP:P25138) [{Neisseria
meningitidis]; contains Pfam profile: PF00254 FKBP-type
peptidyl-prolyl cis-trans isomerases; similar to
FK506-binding protein 39 kDa (Peptidyl-prolyl cis-trans
isomerase) (PPiase) (EC 5.2.1.8) (SP:O74191)
{Schizosaccharomyces pombe}
Length = 207
Score = 34.3 bits (75), Expect = 0.094
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 11/71 (15%)
Frame = +3
Query: 291 KFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAY---GAKGSPPVIPP--------NS 437
K L +VI G + GMK GGKR+ + PP + Y K P P N
Sbjct: 136 KLILDENDVIEGLKEVLVGMKAGGKRRALIPPSVGYINETLKPIPEEFGPRRSLLSHANE 195
Query: 438 TLVFEVELKNV 470
LVFE++L V
Sbjct: 196 PLVFEIQLLKV 206
>At1g72830.2 68414.m08422 CCAAT-binding transcription factor
(CBF-B/NF-YA) family protein contains Pfam profile:
PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA)
subunit B
Length = 341
Score = 31.1 bits (67), Expect = 0.88
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 367 LLPPTFIPETPTSQPLMTSFAPRRNLNPGPLRQLSNIF 254
LL T++P+ PT P M S P R P L + +F
Sbjct: 145 LLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETDPVF 182
>At1g72830.1 68414.m08421 CCAAT-binding transcription factor
(CBF-B/NF-YA) family protein contains Pfam profile:
PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA)
subunit B
Length = 340
Score = 31.1 bits (67), Expect = 0.88
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 367 LLPPTFIPETPTSQPLMTSFAPRRNLNPGPLRQLSNIF 254
LL T++P+ PT P M S P R P L + +F
Sbjct: 145 LLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETDPVF 182
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 358 PTFIPETPTSQPLMTSFAPRRNLNPGP 278
PT P TPT +++S AP R +P P
Sbjct: 244 PTRRPSTPTGPSIVSSKAPSRGTSPSP 270
>At2g27630.1 68415.m03350 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF04780:
Protein of unknown function (DUF629), PF04781: Protein
of unknown function (DUF627)
Length = 1122
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +1
Query: 220 MVYYEGRLKQNKKCLTTASRDLDSSSVLAQ 309
++YY+ LK+ K+CL+ +++ DS S +AQ
Sbjct: 107 VMYYKKCLKKAKQCLSVSNQSEDSDSSVAQ 136
>At5g20200.1 68418.m02406 nucleoporin-related contains weak
similarity to Nucleoporin NUP1 (Nuclear pore protein
NUP1) (Swiss-Prot:P20676) [Saccharomyces cerevisiae]
Length = 762
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 460 NSTSNTKVELGGITGGEPFAPYAMPGGQII-FLLPPTFIPETPTSQPLMTSFAP 302
+S N K L I+ +PF +A+P G F P + T +S+P S P
Sbjct: 619 HSLGNNKPVLPSISVAKPFQKWAVPSGSNAGFTFPVSSSDGTTSSEPTTPSIMP 672
>At3g54010.2 68416.m05972 peptidyl-prolyl cis-trans isomerase,
putative / FK506-binding protein, putative / pasticcino
1-D (PAS1-D) nearly identical to pasticcino 1-D
[Arabidopsis thaliana] GI:3080740
Length = 545
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 291 KFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVEL 461
+F G V G+++ M G + CPP AY PP + + + +E+EL
Sbjct: 233 EFSSGEGLVPEGFEMCTRLMLPGEIALVTCPPDYAYDKFPRPPGVSEGAHVQWEIEL 289
>At3g54010.1 68416.m05971 peptidyl-prolyl cis-trans isomerase,
putative / FK506-binding protein, putative / pasticcino
1-D (PAS1-D) nearly identical to pasticcino 1-D
[Arabidopsis thaliana] GI:3080740
Length = 635
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 291 KFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVEL 461
+F G V G+++ M G + CPP AY PP + + + +E+EL
Sbjct: 323 EFSSGEGLVPEGFEMCTRLMLPGEIALVTCPPDYAYDKFPRPPGVSEGAHVQWEIEL 379
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 28.3 bits (60), Expect = 6.2
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Frame = +1
Query: 124 IEKKEKKALSGGVQIEDLKLGNGPVAKPGKVVMVYYEGRLKQNKK-CLTTASRDLDSSSV 300
+E E +GG +K KP + M GR KK CL+ + +S +
Sbjct: 41 LEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTPNGRFMTQKKICLSMSDFHPESWNP 100
Query: 301 LAQKRSLAAGMLVFLV*KSEAKGRL--SALPAWRMVQKALLQLFHLTPP*YLKL 456
+ S+ G+L F++ S G + + + R+ + +L F+ P + KL
Sbjct: 101 MWSVSSILTGLLSFMMDTSPTTGSVNTTVIEKQRLAKSSL--AFNCKTPAFRKL 152
>At1g04445.1 68414.m00436 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 172
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = -1
Query: 415 GEPFAPYAMPGGQIIFLL---PPTFIPETP 335
G P AP P + FLL PPT +PETP
Sbjct: 93 GSPHAPAMSPTRKYKFLLPKMPPTTMPETP 122
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 27.9 bits (59), Expect = 8.2
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +1
Query: 124 IEKKEKKALSGGVQIEDLKLGNGPVAKPGKVVMVYYEGRLKQNKK-CLTTASRDLDSSSV 300
+E E +GG +K KP + M GR KK CL+ + +S +
Sbjct: 41 LEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTPNGRFVTQKKICLSMSDFHPESWNP 100
Query: 301 LAQKRSLAAGMLVFLV*KSEAKGRLS 378
+ S+ G+L F++ S G ++
Sbjct: 101 MWSVSSILTGLLSFMMDNSPTTGSVN 126
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,769,873
Number of Sequences: 28952
Number of extensions: 321173
Number of successful extensions: 851
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1785055200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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