Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20062
(635 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g33650.1 68417.m04780 dynamin-like protein 2a (ADL2a) identic... 129 2e-30
At2g14120.2 68415.m01573 dynamin-like protein 2b (ADL2b) identic... 120 8e-28
At2g14120.1 68415.m01572 dynamin-like protein 2b (ADL2b) identic... 120 8e-28
At3g60190.1 68416.m06724 dynamin-like protein E (DL1E) nearly id... 111 5e-25
At1g14830.1 68414.m01774 dynamin-like protein C (DL1C) nearly id... 108 3e-24
At3g61760.1 68416.m06927 dynamin-like protein B (DL1B) identical... 106 1e-23
At2g44590.3 68415.m05551 dynamin-like protein D (DL1D) identical... 105 2e-23
At5g42080.2 68418.m05123 GTP-binding protein / phragmoplastin, p... 104 4e-23
At5g42080.1 68418.m05122 GTP-binding protein / phragmoplastin, p... 104 4e-23
At2g44590.2 68415.m05550 dynamin-like protein D (DL1D) identical... 102 2e-22
At2g44590.1 68415.m05549 dynamin-like protein D (DL1D) identical... 102 2e-22
At1g60500.1 68414.m06811 dynamin family protein similar to RBTMx... 61 7e-10
At1g60540.1 68414.m06815 dynamin family protein similar to SP|Q9... 58 4e-09
At1g60530.1 68414.m06814 dynamin family protein similar to mx2 p... 58 4e-09
At1g10290.1 68414.m01159 dynamin-like protein 6 (ADL6) identical... 51 7e-07
At1g59610.1 68414.m06704 dynamin-like protein, putative (ADL3) s... 48 5e-06
At5g37890.1 68418.m04565 seven in absentia (SINA) protein, putat... 32 0.28
At1g53140.1 68414.m06017 dynamin family protein low similarity t... 29 2.0
At5g07830.1 68418.m00898 glycosyl hydrolase family 79 N-terminal... 29 2.6
At1g28260.2 68414.m03469 expressed protein 29 2.6
At1g28260.1 68414.m03468 expressed protein 29 2.6
At1g76170.1 68414.m08845 expressed protein contains Pfam profil... 28 6.0
At1g54380.1 68414.m06200 spliceosome protein-related contains Pf... 27 7.9
>At4g33650.1 68417.m04780 dynamin-like protein 2a (ADL2a) identical
to dynamin like protein 2a (ADL2a) [Arabidopsis
thaliana] GI:19032337; supported by cDNA gi:19032336
Length = 808
Score = 129 bits (311), Expect = 2e-30
Identities = 59/93 (63%), Positives = 78/93 (83%)
Frame = +1
Query: 259 QIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGT 438
+I+ MI +I++++CLILAVTPANTDLANSDAL++A VDP G RTIGVITKLD+MD+GT
Sbjct: 191 RIRTMILSYIKQDTCLILAVTPANTDLANSDALQIASIVDPDGHRTIGVITKLDIMDKGT 250
Query: 439 DARDVLENKLLPLRRGYIGVVNRCRKTLTVART 537
DAR +L ++PLR GY+GVVNRC++ + + RT
Sbjct: 251 DARKLLLGNVVPLRLGYVGVVNRCQEDILLNRT 283
Score = 104 bits (250), Expect = 4e-23
Identities = 47/85 (55%), Positives = 63/85 (74%), Gaps = 2/85 (2%)
Frame = +2
Query: 5 TRQLINGNT--EYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSP 178
T+ NG + E+ EF H +F DF+E+R EIEAET+R+ G NKG++ I L++ SP
Sbjct: 104 TKSRANGGSDDEWGEFRHLPETRFYDFSEIRREIEAETNRLVGENKGVADTQIRLKISSP 163
Query: 179 NVLNLTLIDLPGLTKVPIGDQPIDI 253
NVLN+TL+DLPG+TKVP+GDQP DI
Sbjct: 164 NVLNITLVDLPGITKVPVGDQPSDI 188
Score = 41.1 bits (92), Expect = 6e-04
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +3
Query: 510 QKDIDGRKDIAAALAAERKFFLSHPSYRHLADRLG 614
Q+DI + + AL AE KFF SHP Y LADRLG
Sbjct: 275 QEDILLNRTVKEALLAEEKFFRSHPVYHGLADRLG 309
>At2g14120.2 68415.m01573 dynamin-like protein 2b (ADL2b) identical
to dynamin like protein 2b (ADL2b) [Arabidopsis
thaliana] GI:19032339
Length = 780
Score = 120 bits (289), Expect = 8e-28
Identities = 57/93 (61%), Positives = 73/93 (78%)
Frame = +1
Query: 259 QIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGT 438
+I+ MI +I+ SCLILAV+PANTDLANSDAL++A DP G RTIGVITKLD+MD GT
Sbjct: 176 RIRTMILTYIKEPSCLILAVSPANTDLANSDALQIAGNADPDGHRTIGVITKLDIMDRGT 235
Query: 439 DARDVLENKLLPLRRGYIGVVNRCRKTLTVART 537
DAR+ L K +PLR GY+GVVNR ++ + + R+
Sbjct: 236 DARNHLLGKTIPLRLGYVGVVNRSQEDILMNRS 268
Score = 104 bits (250), Expect = 4e-23
Identities = 45/75 (60%), Positives = 63/75 (84%), Gaps = 1/75 (1%)
Frame = +2
Query: 32 EYAEFLHCKG-KKFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLNLTLIDL 208
E+ EFLH ++ DF+E+R EIEAET+RV+G NKG+S +PI L+++SPNVL+++L+DL
Sbjct: 99 EWGEFLHHDPVRRIYDFSEIRREIEAETNRVSGENKGVSDIPIGLKIFSPNVLDISLVDL 158
Query: 209 PGLTKVPIGDQPIDI 253
PG+TKVP+GDQP DI
Sbjct: 159 PGITKVPVGDQPSDI 173
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +3
Query: 510 QKDIDGRKDIAAALAAERKFFLSHPSYRHLADRLG 614
Q+DI + I AL AE KFF S P Y L DRLG
Sbjct: 260 QEDILMNRSIKDALVAEEKFFRSRPVYSGLTDRLG 294
>At2g14120.1 68415.m01572 dynamin-like protein 2b (ADL2b) identical
to dynamin like protein 2b (ADL2b) [Arabidopsis
thaliana] GI:19032339
Length = 780
Score = 120 bits (289), Expect = 8e-28
Identities = 57/93 (61%), Positives = 73/93 (78%)
Frame = +1
Query: 259 QIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGT 438
+I+ MI +I+ SCLILAV+PANTDLANSDAL++A DP G RTIGVITKLD+MD GT
Sbjct: 176 RIRTMILTYIKEPSCLILAVSPANTDLANSDALQIAGNADPDGHRTIGVITKLDIMDRGT 235
Query: 439 DARDVLENKLLPLRRGYIGVVNRCRKTLTVART 537
DAR+ L K +PLR GY+GVVNR ++ + + R+
Sbjct: 236 DARNHLLGKTIPLRLGYVGVVNRSQEDILMNRS 268
Score = 104 bits (250), Expect = 4e-23
Identities = 45/75 (60%), Positives = 63/75 (84%), Gaps = 1/75 (1%)
Frame = +2
Query: 32 EYAEFLHCKG-KKFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLNLTLIDL 208
E+ EFLH ++ DF+E+R EIEAET+RV+G NKG+S +PI L+++SPNVL+++L+DL
Sbjct: 99 EWGEFLHHDPVRRIYDFSEIRREIEAETNRVSGENKGVSDIPIGLKIFSPNVLDISLVDL 158
Query: 209 PGLTKVPIGDQPIDI 253
PG+TKVP+GDQP DI
Sbjct: 159 PGITKVPVGDQPSDI 173
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +3
Query: 510 QKDIDGRKDIAAALAAERKFFLSHPSYRHLADRLG 614
Q+DI + I AL AE KFF S P Y L DRLG
Sbjct: 260 QEDILMNRSIKDALVAEEKFFRSRPVYSGLTDRLG 294
>At3g60190.1 68416.m06724 dynamin-like protein E (DL1E) nearly
identical to dynamin-like protein E [Arabidopsis
thaliana] GI:19423872; contains Pfam profiles PF01031:
Dynamin central region, PF00350: Dynamin family,
PF02212: Dynamin GTPase effector domain
Length = 624
Score = 111 bits (266), Expect = 5e-25
Identities = 52/75 (69%), Positives = 60/75 (80%)
Frame = +2
Query: 20 NGNTEYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLNLTL 199
+G EYAEFLH K+FTDF VR EI+ ETDR+TG NK ISPVPI+L +YSPNV+NLTL
Sbjct: 87 DGTEEYAEFLHLPKKQFTDFALVRREIQDETDRITGKNKQISPVPIHLSIYSPNVVNLTL 146
Query: 200 IDLPGLTKVPIGDQP 244
IDLPGLTKV + QP
Sbjct: 147 IDLPGLTKVAVEGQP 161
Score = 101 bits (243), Expect = 3e-22
Identities = 44/84 (52%), Positives = 66/84 (78%)
Frame = +1
Query: 256 QQIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEG 435
+ I+ M+ ++ + +C+ILA++PAN D+A SDA+KLAK+VDP G RT GV+TKLDLMD+G
Sbjct: 166 EDIESMVRTYVDKPNCIILAISPANQDIATSDAIKLAKDVDPTGERTFGVLTKLDLMDKG 225
Query: 436 TDARDVLENKLLPLRRGYIGVVNR 507
T+A +VLE + L+ ++G+VNR
Sbjct: 226 TNALEVLEGRSYRLQHPWVGIVNR 249
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 510 QKDIDGRKDIAAALAAERKFFLSHPSYRHLADRLGT 617
Q DI+ D+ A ER++F + P Y HLA ++G+
Sbjct: 251 QADINKNVDMMLARRKEREYFDTSPDYGHLASKMGS 286
>At1g14830.1 68414.m01774 dynamin-like protein C (DL1C) nearly
identical to dynamin-like protein C [Arabidopsis
thaliana] GI:19569772
Length = 614
Score = 108 bits (260), Expect = 3e-24
Identities = 51/78 (65%), Positives = 59/78 (75%)
Frame = +2
Query: 20 NGNTEYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLNLTL 199
+G TEYAEFLH K+F DF VR EIE ETDR+TG +K IS +PI L +YSPNV+NLTL
Sbjct: 82 DGTTEYAEFLHAPKKRFADFAAVRKEIEDETDRITGKSKQISNIPIQLSIYSPNVVNLTL 141
Query: 200 IDLPGLTKVPIGDQPIDI 253
IDLPGLTKV + QP I
Sbjct: 142 IDLPGLTKVAVDGQPESI 159
Score = 104 bits (249), Expect = 6e-23
Identities = 45/84 (53%), Positives = 64/84 (76%)
Frame = +1
Query: 256 QQIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEG 435
Q I+ M+ ++ + +C+ILA++PAN D+A SDA+KLA+EVDP G RT GV TKLD+MD+G
Sbjct: 161 QDIENMVRSYVEKPNCIILAISPANQDIATSDAIKLAREVDPTGERTFGVATKLDIMDKG 220
Query: 436 TDARDVLENKLLPLRRGYIGVVNR 507
TD DVLE + L+ ++G+VNR
Sbjct: 221 TDCLDVLEGRSYRLQHPWVGIVNR 244
Score = 36.7 bits (81), Expect = 0.013
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 510 QKDIDGRKDIAAALAAERKFFLSHPSYRHLADRLGT 617
Q DI+ R D+ AA E+++F + P Y HLA R+G+
Sbjct: 246 QADINKRVDMIAARRKEQEYFETSPEYGHLASRMGS 281
>At3g61760.1 68416.m06927 dynamin-like protein B (DL1B) identical to
dynamin-like protein B [Arabidopsis thaliana]
GI:27543504; strong similarity to GTP-binding protein
[Arabidopsis thaliana] GI:807577, phragmoplastin SDL5A
[Glycine max] GI:1218004; contains Pfam profiles
PF01031: Dynamin central region, PF00350: Dynamin
family, PF02212: Dynamin GTPase effector domain
Length = 610
Score = 106 bits (254), Expect = 1e-23
Identities = 47/84 (55%), Positives = 67/84 (79%)
Frame = +1
Query: 256 QQIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEG 435
Q I+ M+ FI + +C+ILA++PAN DLA SDA+K+++EVDP+G RT GV+TK+DLMD+G
Sbjct: 160 QDIENMVRSFIEKPNCIILAISPANQDLATSDAIKISREVDPKGDRTFGVLTKIDLMDQG 219
Query: 436 TDARDVLENKLLPLRRGYIGVVNR 507
T+A D+LE + LR ++GVVNR
Sbjct: 220 TNAVDILEGRGYKLRYPWVGVVNR 243
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/80 (62%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Frame = +2
Query: 17 INGNTEYAEFLHCKGKKFTDFNEVRGEIEAETDRVTG-SNKGISPVPINLRVYSPNVLNL 193
I+ EYAEF+H KKFTDF VR EI ETDR TG S+K IS VPI+L ++SPNV+NL
Sbjct: 79 IDEGKEYAEFMHLPKKKFTDFAAVRQEISDETDRETGRSSKVISTVPIHLSIFSPNVVNL 138
Query: 194 TLIDLPGLTKVPIGDQPIDI 253
TL+DLPGLTKV + QP I
Sbjct: 139 TLVDLPGLTKVAVDGQPESI 158
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +3
Query: 510 QKDIDGRKDIAAALAAERKFFLSHPSYRHLADRLGT 617
Q DI+ D+ AA ER +F + P YRHL +R+G+
Sbjct: 245 QADINKSVDMIAARRRERDYFQTSPEYRHLTERMGS 280
>At2g44590.3 68415.m05551 dynamin-like protein D (DL1D) identical to
dynamin-like protein D [Arabidopsis thaliana]
GI:19569770; contains Pfam profiles PF01031: Dynamin
central region, PF00350: Dynamin family, PF02212:
Dynamin GTPase effector domain
Length = 612
Score = 105 bits (253), Expect = 2e-23
Identities = 49/75 (65%), Positives = 59/75 (78%)
Frame = +2
Query: 20 NGNTEYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLNLTL 199
NG + AEFLH KKFT+F+ VR EIE ETDR+TG NK IS +PI+L ++SPNV+NLTL
Sbjct: 82 NGTEDNAEFLHLTNKKFTNFSLVRKEIEDETDRITGKNKQISSIPIHLSIFSPNVVNLTL 141
Query: 200 IDLPGLTKVPIGDQP 244
IDLPGLTKV + QP
Sbjct: 142 IDLPGLTKVAVEGQP 156
Score = 102 bits (245), Expect = 2e-22
Identities = 45/84 (53%), Positives = 65/84 (77%)
Frame = +1
Query: 256 QQIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEG 435
+ I+ M+ ++ + +CLILA++PAN D+A SDA+KLAKEVDP G RT GV+TKLDLMD+G
Sbjct: 161 EDIESMVRSYVEKPNCLILAISPANQDIATSDAMKLAKEVDPIGDRTFGVLTKLDLMDKG 220
Query: 436 TDARDVLENKLLPLRRGYIGVVNR 507
T+A DV+ + L+ ++G+VNR
Sbjct: 221 TNALDVINGRSYKLKYPWVGIVNR 244
Score = 34.3 bits (75), Expect = 0.069
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 510 QKDIDGRKDIAAALAAERKFFLSHPSYRHLADRLGT 617
Q DI+ D+ A ER++F + P Y HLA R+G+
Sbjct: 246 QADINKNVDMMVARRKEREYFETSPDYGHLATRMGS 281
>At5g42080.2 68418.m05123 GTP-binding protein / phragmoplastin,
putative strong similarity to GTP-binding protein
[Arabidopsis thaliana] GI:807577, phragmoplastin SDL5A
[Glycine max] GI:1218004; contains Pfam profiles
PF01031: Dynamin central region, PF00350: Dynamin family
Length = 429
Score = 104 bits (250), Expect = 4e-23
Identities = 50/78 (64%), Positives = 60/78 (76%)
Frame = +2
Query: 8 RQLINGNTEYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVL 187
+++ +G EYAEFLH KKFTDF VR EI+ ETDR TG +K IS VPI+L +YSPNV+
Sbjct: 77 QKIDDGTREYAEFLHLPRKKFTDFAAVRKEIQDETDRETGRSKAISSVPIHLSIYSPNVV 136
Query: 188 NLTLIDLPGLTKVPIGDQ 241
NLTLIDLPGLTKV + Q
Sbjct: 137 NLTLIDLPGLTKVAVDGQ 154
Score = 103 bits (246), Expect = 1e-22
Identities = 44/84 (52%), Positives = 66/84 (78%)
Frame = +1
Query: 256 QQIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEG 435
+ I+ M+ +I + +C+ILA++PAN DLA SDA+K+++EVDP G RT GV+TK+DLMD+G
Sbjct: 160 KDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPSGDRTFGVLTKIDLMDKG 219
Query: 436 TDARDVLENKLLPLRRGYIGVVNR 507
TDA ++LE + L+ ++GVVNR
Sbjct: 220 TDAVEILEGRSFKLKYPWVGVVNR 243
Score = 35.1 bits (77), Expect = 0.039
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 510 QKDIDGRKDIAAALAAERKFFLSHPSYRHLADRLGT 617
Q DI+ D+ AA ER++F + YRHLA+++G+
Sbjct: 245 QADINKNVDMIAARKREREYFSNTTEYRHLANKMGS 280
>At5g42080.1 68418.m05122 GTP-binding protein / phragmoplastin,
putative strong similarity to GTP-binding protein
[Arabidopsis thaliana] GI:807577, phragmoplastin SDL5A
[Glycine max] GI:1218004; contains Pfam profiles
PF01031: Dynamin central region, PF00350: Dynamin family
Length = 610
Score = 104 bits (250), Expect = 4e-23
Identities = 50/78 (64%), Positives = 60/78 (76%)
Frame = +2
Query: 8 RQLINGNTEYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVL 187
+++ +G EYAEFLH KKFTDF VR EI+ ETDR TG +K IS VPI+L +YSPNV+
Sbjct: 77 QKIDDGTREYAEFLHLPRKKFTDFAAVRKEIQDETDRETGRSKAISSVPIHLSIYSPNVV 136
Query: 188 NLTLIDLPGLTKVPIGDQ 241
NLTLIDLPGLTKV + Q
Sbjct: 137 NLTLIDLPGLTKVAVDGQ 154
Score = 103 bits (246), Expect = 1e-22
Identities = 44/84 (52%), Positives = 66/84 (78%)
Frame = +1
Query: 256 QQIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEG 435
+ I+ M+ +I + +C+ILA++PAN DLA SDA+K+++EVDP G RT GV+TK+DLMD+G
Sbjct: 160 KDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPSGDRTFGVLTKIDLMDKG 219
Query: 436 TDARDVLENKLLPLRRGYIGVVNR 507
TDA ++LE + L+ ++GVVNR
Sbjct: 220 TDAVEILEGRSFKLKYPWVGVVNR 243
Score = 35.1 bits (77), Expect = 0.039
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 510 QKDIDGRKDIAAALAAERKFFLSHPSYRHLADRLGT 617
Q DI+ D+ AA ER++F + YRHLA+++G+
Sbjct: 245 QADINKNVDMIAARKREREYFSNTTEYRHLANKMGS 280
>At2g44590.2 68415.m05550 dynamin-like protein D (DL1D) identical to
dynamin-like protein D [Arabidopsis thaliana]
GI:19569770; contains Pfam profiles PF01031: Dynamin
central region, PF00350: Dynamin family, PF02212:
Dynamin GTPase effector domain
Length = 595
Score = 102 bits (245), Expect = 2e-22
Identities = 45/84 (53%), Positives = 65/84 (77%)
Frame = +1
Query: 256 QQIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEG 435
+ I+ M+ ++ + +CLILA++PAN D+A SDA+KLAKEVDP G RT GV+TKLDLMD+G
Sbjct: 144 EDIESMVRSYVEKPNCLILAISPANQDIATSDAMKLAKEVDPIGDRTFGVLTKLDLMDKG 203
Query: 436 TDARDVLENKLLPLRRGYIGVVNR 507
T+A DV+ + L+ ++G+VNR
Sbjct: 204 TNALDVINGRSYKLKYPWVGIVNR 227
Score = 73.7 bits (173), Expect = 9e-14
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = +2
Query: 20 NGNTEYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPN 181
NG + AEFLH KKFT+F+ VR EIE ETDR+TG NK IS +PI+L ++SPN
Sbjct: 82 NGTEDNAEFLHLTNKKFTNFSLVRKEIEDETDRITGKNKQISSIPIHLSIFSPN 135
Score = 34.3 bits (75), Expect = 0.069
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 510 QKDIDGRKDIAAALAAERKFFLSHPSYRHLADRLGT 617
Q DI+ D+ A ER++F + P Y HLA R+G+
Sbjct: 229 QADINKNVDMMVARRKEREYFETSPDYGHLATRMGS 264
>At2g44590.1 68415.m05549 dynamin-like protein D (DL1D) identical to
dynamin-like protein D [Arabidopsis thaliana]
GI:19569770; contains Pfam profiles PF01031: Dynamin
central region, PF00350: Dynamin family, PF02212:
Dynamin GTPase effector domain
Length = 596
Score = 102 bits (245), Expect = 2e-22
Identities = 45/84 (53%), Positives = 65/84 (77%)
Frame = +1
Query: 256 QQIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEG 435
+ I+ M+ ++ + +CLILA++PAN D+A SDA+KLAKEVDP G RT GV+TKLDLMD+G
Sbjct: 144 EDIESMVRSYVEKPNCLILAISPANQDIATSDAMKLAKEVDPIGDRTFGVLTKLDLMDKG 203
Query: 436 TDARDVLENKLLPLRRGYIGVVNR 507
T+A DV+ + L+ ++G+VNR
Sbjct: 204 TNALDVINGRSYKLKYPWVGIVNR 227
Score = 73.7 bits (173), Expect = 9e-14
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = +2
Query: 20 NGNTEYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPN 181
NG + AEFLH KKFT+F+ VR EIE ETDR+TG NK IS +PI+L ++SPN
Sbjct: 82 NGTEDNAEFLHLTNKKFTNFSLVRKEIEDETDRITGKNKQISSIPIHLSIFSPN 135
Score = 34.3 bits (75), Expect = 0.069
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 510 QKDIDGRKDIAAALAAERKFFLSHPSYRHLADRLGT 617
Q DI+ D+ A ER++F + P Y HLA R+G+
Sbjct: 229 QADINKNVDMMVARRKEREYFETSPDYGHLATRMGS 264
>At1g60500.1 68414.m06811 dynamin family protein similar to RBTMx2
[Oncorhynchus mykiss] GI:1399452; contains Pfam profiles
PF01031: Dynamin central region, PF00350: Dynamin
family, PF02212: Dynamin GTPase effector domain
Length = 669
Score = 60.9 bits (141), Expect = 7e-10
Identities = 27/61 (44%), Positives = 38/61 (62%)
Frame = +2
Query: 71 TDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLNLTLIDLPGLTKVPIGDQPID 250
TD + I A TD + GS KG+S P+ L V V +LT++DLPG+T+VP+ QP +
Sbjct: 127 TDEEHIAEAIRAATDVIAGSGKGVSDAPLTLHVKKAGVPDLTMVDLPGITRVPVNGQPEN 186
Query: 251 I 253
I
Sbjct: 187 I 187
Score = 56.4 bits (130), Expect = 1e-08
Identities = 28/84 (33%), Positives = 49/84 (58%)
Frame = +1
Query: 256 QQIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEG 435
+QI GMI ++I + +IL V A D ++++++++VD G RT+ V+TK D+ EG
Sbjct: 189 EQISGMIMEYIEPQESIILNVLSATVDFTTCESIRMSRKVDKTGQRTLAVVTKADMAPEG 248
Query: 436 TDARDVLENKLLPLRRGYIGVVNR 507
+ ++ + L GY+ V NR
Sbjct: 249 LLQKVTADDVSIVL--GYVCVRNR 270
>At1g60540.1 68414.m06815 dynamin family protein similar to
SP|Q91192 Interferon-induced GTP-binding protein Mx
{Oncorhynchus mykiss}; contains Pfam profiles PF01031:
Dynamin central region, PF00350: Dynamin family,
PF02212: Dynamin GTPase effector domain
Length = 648
Score = 58.4 bits (135), Expect = 4e-09
Identities = 26/61 (42%), Positives = 38/61 (62%)
Frame = +2
Query: 71 TDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLNLTLIDLPGLTKVPIGDQPID 250
TD + I A TD + GS KG+S P+ L V V ++T++DLPG+T+VP+ QP +
Sbjct: 128 TDEEHIAQTICAATDVIAGSGKGVSDTPLTLHVKKAGVPDITMVDLPGITRVPVNGQPEN 187
Query: 251 I 253
I
Sbjct: 188 I 188
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/84 (32%), Positives = 48/84 (57%)
Frame = +1
Query: 256 QQIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEG 435
+QI M+ ++I + +IL V A D ++++++K+VD G RT+ V+TK D+ EG
Sbjct: 190 EQISRMVMKYIEPQESIILNVLSATVDFTTCESIRMSKQVDKTGERTLAVVTKADMAPEG 249
Query: 436 TDARDVLENKLLPLRRGYIGVVNR 507
+ ++ + L GY+ V NR
Sbjct: 250 LLQKVTADDVSIGL--GYVCVRNR 271
>At1g60530.1 68414.m06814 dynamin family protein similar to mx2
protein GI:5578742 from [Mus musculus musculus];
contains Pfam profile PF00350: Dynamin family
Length = 301
Score = 58.4 bits (135), Expect = 4e-09
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +2
Query: 71 TDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLNLTLIDLPGLTKVPIGDQPID 250
TD V I A TD + G+ +G+S P+ L V NV +LT++DLPG+T+VP+ QP +
Sbjct: 124 TDEEHVAEAICAATDVIAGTGEGVSDTPLTLSVKKNNVPDLTMVDLPGITRVPVNGQPEN 183
Query: 251 I 253
I
Sbjct: 184 I 184
Score = 53.2 bits (122), Expect = 1e-07
Identities = 28/84 (33%), Positives = 48/84 (57%)
Frame = +1
Query: 256 QQIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEG 435
+QI MI ++I + +IL V A D ++++++++VD G RT+ V+TK D+ EG
Sbjct: 186 EQISRMIMKYIEPQESIILNVLSATVDFTTCESIRMSRQVDKTGERTLAVVTKADMAPEG 245
Query: 436 TDARDVLENKLLPLRRGYIGVVNR 507
+ ++ + L GYI V NR
Sbjct: 246 LLQKVTADDVSIGL--GYICVRNR 267
>At1g10290.1 68414.m01159 dynamin-like protein 6 (ADL6) identical to
dynamin-like protein 6 (ADL6) [Arabidopsis thaliana]
GI:6651399; contains Pfam profiles PF01031: Dynamin
central region, PF00350: Dynamin family, PF02212:
Dynamin GTPase effector domain, PF00169: PH domain
Length = 914
Score = 50.8 bits (116), Expect = 7e-07
Identities = 23/62 (37%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Frame = +1
Query: 265 KGMIFQFIRRESCLILAVTPAN--TDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGT 438
+ MI ++ + ++L + PA+ +++++S ALK+AKE DP+ RTIG+I K+D E +
Sbjct: 154 ESMIAEYAQHNDAILLVIVPASQASEISSSRALKIAKEYDPESTRTIGIIGKIDQAAENS 213
Query: 439 DA 444
A
Sbjct: 214 KA 215
>At1g59610.1 68414.m06704 dynamin-like protein, putative (ADL3)
strong similarity to dynamin-like protein 6 (ADL6)
[Arabidopsis thaliana] GI:6651399; contains Pfam
profiles PF01031: Dynamin central region, PF00350:
Dynamin family, PF02212: Dynamin GTPase effector domain,
PF00169: PH domain; identical to cDNA dynamin-like
protein ADL3, GI:4803835
Length = 920
Score = 48.0 bits (109), Expect = 5e-06
Identities = 21/52 (40%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Frame = +1
Query: 271 MIFQFIRRESCLILAVTPAN--TDLANSDALKLAKEVDPQGLRTIGVITKLD 420
MI + + ++L V PA+ +++++S ALK+AKE DP+ RT+G+I+K+D
Sbjct: 156 MIGEHAQHNDAILLVVVPASQASEISSSRALKIAKEYDPESTRTVGIISKID 207
>At5g37890.1 68418.m04565 seven in absentia (SINA) protein, putative
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 286
Score = 32.3 bits (70), Expect = 0.28
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -3
Query: 144 DIPLLEPVTRSVSASISPRTSLKSVNFFPLQCKNSAYSVFPFISCLVP 1
DIPL V ++S I RT + + F +QC Y V+ +SC+ P
Sbjct: 173 DIPL--SVRMNISKKILIRTEHLTNHLFAVQCFREPYGVYVTVSCIAP 218
>At1g53140.1 68414.m06017 dynamin family protein low similarity to
dynamin-like protein E [Arabidopsis thaliana]
GI:19423872; contains Pfam profile PF00350: Dynamin
family
Length = 817
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 59 GKKFTDFNEVRGEIEAETDRVTGSNK-GISPVPINLRVYSPNVLNLTLIDLPG 214
G V I + T+ + K +SP PI +R + NLT+ID PG
Sbjct: 126 GSPIVSATAVADVIRSRTEALLKKTKTAVSPKPIVMRAEYAHCPNLTIIDTPG 178
>At5g07830.1 68418.m00898 glycosyl hydrolase family 79 N-terminal
domain-containing protein similar to beta-glucuronidase
GI:8918740 from [Scutellaria baicalensis]
Length = 543
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -3
Query: 150 TGDIPLLEPVTRSVSASIS 94
TGDIP LEPV RSV++ ++
Sbjct: 505 TGDIPSLEPVLRSVNSPLN 523
>At1g28260.2 68414.m03469 expressed protein
Length = 880
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 411 CYYADSTQSLWVYFFGKLQSIAVGQIRVGRSNCQDK 304
C + + ++S YFFGKL I + Q++V NC K
Sbjct: 416 CRFDEKSKSAISYFFGKLVDI-LNQLKVKDKNCPAK 450
>At1g28260.1 68414.m03468 expressed protein
Length = 880
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 411 CYYADSTQSLWVYFFGKLQSIAVGQIRVGRSNCQDK 304
C + + ++S YFFGKL I + Q++V NC K
Sbjct: 416 CRFDEKSKSAISYFFGKLVDI-LNQLKVKDKNCPAK 450
>At1g76170.1 68414.m08845 expressed protein contains Pfam profile
PF01171: PP-loop family
Length = 299
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 382 QGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRCRKTLT 525
Q L + K+D + G +A D+ E +L + RG I ++RC T
Sbjct: 130 QALDRGAALLKVDKLVTGHNADDIAETVVLNILRGDIARLSRCTSITT 177
>At1g54380.1 68414.m06200 spliceosome protein-related contains Pfam
domain, PF04938: Survival motor neuron (SMN) interacting
protein 1 (SIP1)
Length = 515
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 29 TEYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKG 139
TEY ++ K K + N VRG E+ + G+ +G
Sbjct: 232 TEYESLVYVKNYKSSKSNRVRGRTESGNEENLGTEEG 268
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,312,130
Number of Sequences: 28952
Number of extensions: 262141
Number of successful extensions: 708
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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