Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20030
(713 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 248 3e-66
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 248 3e-66
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 248 3e-66
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 248 3e-66
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 153 8e-38
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 147 6e-36
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 78 7e-15
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 73 2e-13
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 43 2e-04
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 38 0.005
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 38 0.005
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 37 0.015
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 36 0.020
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 36 0.020
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 35 0.047
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 35 0.047
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 35 0.062
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 33 0.19
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 33 0.19
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 31 0.57
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 31 0.76
At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 31 1.0
At5g13650.2 68418.m01585 elongation factor family protein contai... 30 1.3
At5g13650.1 68418.m01584 elongation factor family protein contai... 30 1.3
At4g20430.1 68417.m02981 subtilase family protein contains Pfam ... 30 1.8
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 29 2.3
At1g30900.1 68414.m03780 vacuolar sorting receptor, putative sim... 29 2.3
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 29 3.1
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 29 4.0
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 29 4.0
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 29 4.0
At1g47840.1 68414.m05325 hexokinase, putative similar to hexokin... 29 4.0
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 28 5.3
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 28 5.3
At3g18370.1 68416.m02336 C2 domain-containing protein contains P... 28 7.1
At1g69900.1 68414.m08044 expressed protein contains Pfam profil... 28 7.1
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 248 bits (607), Expect = 3e-66
Identities = 123/169 (72%), Positives = 135/169 (79%)
Frame = +1
Query: 1 RHEINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 180
+ INIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLK
Sbjct: 5 KFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLK 64
Query: 181 AERERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 360
AERER + + C IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FE
Sbjct: 65 AERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFE 124
Query: 361 AGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 507
AGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KE
Sbjct: 125 AGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKE 173
Score = 64.5 bits (150), Expect = 7e-11
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +3
Query: 510 SSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 626
SSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 175 SSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 248 bits (607), Expect = 3e-66
Identities = 123/169 (72%), Positives = 135/169 (79%)
Frame = +1
Query: 1 RHEINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 180
+ INIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLK
Sbjct: 5 KFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLK 64
Query: 181 AERERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 360
AERER + + C IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FE
Sbjct: 65 AERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFE 124
Query: 361 AGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 507
AGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KE
Sbjct: 125 AGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKE 173
Score = 64.5 bits (150), Expect = 7e-11
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +3
Query: 510 SSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 626
SSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 175 SSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 248 bits (607), Expect = 3e-66
Identities = 123/169 (72%), Positives = 135/169 (79%)
Frame = +1
Query: 1 RHEINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 180
+ INIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLK
Sbjct: 5 KFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLK 64
Query: 181 AERERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 360
AERER + + C IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FE
Sbjct: 65 AERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFE 124
Query: 361 AGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 507
AGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KE
Sbjct: 125 AGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKE 173
Score = 64.5 bits (150), Expect = 7e-11
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +3
Query: 510 SSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 626
SSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 175 SSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 248 bits (607), Expect = 3e-66
Identities = 123/169 (72%), Positives = 135/169 (79%)
Frame = +1
Query: 1 RHEINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 180
+ INIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLK
Sbjct: 5 KFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLK 64
Query: 181 AERERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 360
AERER + + C IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FE
Sbjct: 65 AERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFE 124
Query: 361 AGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 507
AGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KE
Sbjct: 125 AGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKE 173
Score = 64.5 bits (150), Expect = 7e-11
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +3
Query: 510 SSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 626
SSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 175 SSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 153 bits (372), Expect = 8e-38
Identities = 76/167 (45%), Positives = 107/167 (64%), Gaps = 1/167 (0%)
Frame = +1
Query: 7 EINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAE 186
++N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+ E
Sbjct: 239 QLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAEE 298
Query: 187 RERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 366
RER + + +D+PGH+DF+ NMI G +QAD A+L++ A G FEAG
Sbjct: 299 RERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAG 358
Query: 367 ISK-NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKK 504
GQTREHA + GV+Q+IV +NKMD YS+ RF+ IK+
Sbjct: 359 FDNLKGQTREHARVLRGFGVEQVIVAINKMDIV--GYSKERFDLIKQ 403
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 147 bits (357), Expect = 6e-36
Identities = 73/169 (43%), Positives = 108/169 (63%)
Frame = +1
Query: 1 RHEINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 180
RH +N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D +
Sbjct: 100 RH-LNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTNE 158
Query: 181 AERERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 360
ER + +DAPGH+ ++ NMI+G SQAD VL+++A GEFE
Sbjct: 159 EERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFE 218
Query: 361 AGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 507
G + GQTREH LA TLGV +LIV VNKMD +S+ R++EI+++
Sbjct: 219 TGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQK 267
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +3
Query: 516 YIKKIGYNPAA-VAFVPISGWHGDNMLEPSTK--MPWFKG 626
++K GYN V F+PISG G NM + + PW+ G
Sbjct: 271 FLKASGYNTKKDVVFLPISGLMGKNMDQRMGQEICPWWSG 310
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 77.8 bits (183), Expect = 7e-15
Identities = 50/152 (32%), Positives = 72/152 (47%)
Frame = +1
Query: 10 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 189
+NI IGHVD GK+T T L I +K+++ +D ER
Sbjct: 80 VNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE---------------IDAAPEER 124
Query: 190 ERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 369
R ++E H+D PGH D++KNMITG +Q D A+L+V+ G
Sbjct: 125 ARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP--- 181
Query: 370 SKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 465
QT+EH LLA +GV ++V +NK D +
Sbjct: 182 ----QTKEHILLAKQVGVPDMVVFLNKEDQVD 209
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 72.9 bits (171), Expect = 2e-13
Identities = 50/154 (32%), Positives = 72/154 (46%)
Frame = +1
Query: 10 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 189
+N+ IGHVD GK+T T + K E GK +DK E+
Sbjct: 68 VNVGTIGHVDHGKTTLTAAIT---------------KVLAEEGKAKAIAFDEIDKAPEEK 112
Query: 190 ERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 369
+R +E + H+D PGH D++KNMITG +Q D +L+V+ G
Sbjct: 113 KRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP--- 169
Query: 370 SKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPP 471
QT+EH LLA +GV L+ +NK+D + P
Sbjct: 170 ----QTKEHILLARQVGVPSLVCFLNKVDVVDDP 199
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 43.2 bits (97), Expect = 2e-04
Identities = 34/113 (30%), Positives = 50/113 (44%)
Frame = +1
Query: 13 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 192
NI ++ HVD GK+T HLI GG + GK F +D L E+
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG--------GVLHPRLAGKLRF-----MDYLDEEQR 57
Query: 193 RRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 351
R + S+ ++ ID+PGH DF + T +D A+++V A G
Sbjct: 58 RAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 38.3 bits (85), Expect = 0.005
Identities = 27/97 (27%), Positives = 44/97 (45%)
Frame = +1
Query: 214 CSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 393
C + +R V C +D PGH + M+ G + D A+L++AA QT E
Sbjct: 121 CKMTLRR-HVSC--VDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAE 171
Query: 394 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKK 504
H + +K +I+ NK+D + + E I+K
Sbjct: 172 HLASVDMMRLKHIIILQNKIDLINEKAATEQHEAIQK 208
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 38.3 bits (85), Expect = 0.005
Identities = 27/97 (27%), Positives = 44/97 (45%)
Frame = +1
Query: 214 CSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 393
C + +R V C +D PGH + M+ G + D A+L++AA QT E
Sbjct: 121 CKMTLRR-HVSC--VDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAE 171
Query: 394 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKK 504
H + +K +I+ NK+D + + E I+K
Sbjct: 172 HLASVDMMRLKHIIILQNKIDLINEKAATEQHEAIQK 208
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 36.7 bits (81), Expect = 0.015
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = +1
Query: 256 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 435
+D PGH + M+ G + D A+LI+AA QT EH + +K +I
Sbjct: 124 VDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHLKDII 177
Query: 436 VGVNKMDSTEPPYSEPRFEEIKK 504
+ NK+D + + + E+I++
Sbjct: 178 IIQNKIDLIQENEAIKQHEDIQR 200
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 36.3 bits (80), Expect = 0.020
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 5/117 (4%)
Frame = +1
Query: 1 RHEI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKYAWV 165
+H I N+ VI HVD GKST T L+ G I + + + A E +G + K +
Sbjct: 16 KHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGI 75
Query: 166 LDKLKAERERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIV 336
L E + N + L ID+PGH DF + D A+++V
Sbjct: 76 --SLYYEMTDESLKSFTGARDGN-EYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 36.3 bits (80), Expect = 0.020
Identities = 23/83 (27%), Positives = 39/83 (46%)
Frame = +1
Query: 256 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 435
+D PGH + M+ G + D A+L++AA QT EH + +K +I
Sbjct: 126 VDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSEHLAAVEIMQLKHII 179
Query: 436 VGVNKMDSTEPPYSEPRFEEIKK 504
+ NK+D + + + E I+K
Sbjct: 180 ILQNKIDLIQENVAINQHEAIQK 202
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 35.1 bits (77), Expect = 0.047
Identities = 33/128 (25%), Positives = 55/128 (42%)
Frame = +1
Query: 13 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 192
NI + H+DSGK+T T +++ G R E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 193 RRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 372
+ + + ID PGH DF + D A+L++ + G I+
Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176
Query: 373 KNGQTREH 396
+ Q R +
Sbjct: 177 VDRQMRRY 184
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 35.1 bits (77), Expect = 0.047
Identities = 33/128 (25%), Positives = 55/128 (42%)
Frame = +1
Query: 13 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 192
NI + H+DSGK+T T +++ G R E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 193 RRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 372
+ + + ID PGH DF + D A+L++ + G I+
Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176
Query: 373 KNGQTREH 396
+ Q R +
Sbjct: 177 VDRQMRRY 184
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 34.7 bits (76), Expect = 0.062
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 3/165 (1%)
Frame = +1
Query: 13 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 192
N +I H+D GKST L+ G + R +++ + ++ + + KL+A R
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKEQFLDNMDLE----RERGITIKLQAARM 143
Query: 193 RR-YHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 369
R Y + L + ID PGH DF + + + A+L+V A G EA
Sbjct: 144 RYVYEDTPFCLNL---------IDTPGHVDFSYEVSRSLAACEGALLVVDASQG-VEA-- 191
Query: 370 SKNGQTREHALLAFTLGVKQLIVGVNKMD--STEPPYSEPRFEEI 498
QT + LA + ++I +NK+D EP EE+
Sbjct: 192 ----QTLANVYLALENNL-EIIPVLNKIDLPGAEPEKVLREIEEV 231
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +1
Query: 229 RN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 351
R+ LC +D PGH +F M AD AVLIV A G
Sbjct: 205 RSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +1
Query: 229 RN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 351
R+ LC +D PGH +F M AD AVLIV A G
Sbjct: 205 RSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 31.5 bits (68), Expect = 0.57
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 13 NIVVIGHVDSGKSTTTGHLIYKCG 84
NI ++ H+D+GK+TTT ++Y G
Sbjct: 98 NIGIMAHIDAGKTTTTERILYYTG 121
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 31.1 bits (67), Expect = 0.76
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +1
Query: 247 CYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 426
C +D PGH F G D A+++VAA G QT E A+
Sbjct: 554 CVFLDTPGHEAFGAMRARGARVTDIAIIVVAADDG-------IRPQTNE-AIAHAKAAAV 605
Query: 427 QLIVGVNKMD 456
+++ +NK+D
Sbjct: 606 PIVIAINKID 615
>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 319
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 250 YHIDAPGHRDFIKNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 426
+ I GH D+ + T Q +C + L+V TG F +KNG R+ LG +
Sbjct: 224 FTIKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAE 283
Query: 427 QLIVGVNKMDSTE 465
+ +DS E
Sbjct: 284 LENLSTFTLDSDE 296
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 30.3 bits (65), Expect = 1.3
Identities = 43/161 (26%), Positives = 68/161 (42%), Gaps = 2/161 (1%)
Frame = +1
Query: 13 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 192
NI ++ HVD GK+T ++ + K ++ Q M + ++D ERE
Sbjct: 85 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 129
Query: 193 RRYH--NRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 366
R ++ S+ +N +V ID PGH DF + + D +L+V + G
Sbjct: 130 RGITILSKNTSITYKNTKVNI--IDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP-- 185
Query: 367 ISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRF 489
QTR A G ++V VNK+D P + P F
Sbjct: 186 -----QTRFVLKKALEFG-HAVVVVVNKIDR---PSARPEF 217
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 30.3 bits (65), Expect = 1.3
Identities = 43/161 (26%), Positives = 68/161 (42%), Gaps = 2/161 (1%)
Frame = +1
Query: 13 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 192
NI ++ HVD GK+T ++ + K ++ Q M + ++D ERE
Sbjct: 84 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 128
Query: 193 RRYH--NRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 366
R ++ S+ +N +V ID PGH DF + + D +L+V + G
Sbjct: 129 RGITILSKNTSITYKNTKVNI--IDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP-- 184
Query: 367 ISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRF 489
QTR A G ++V VNK+D P + P F
Sbjct: 185 -----QTRFVLKKALEFG-HAVVVVVNKIDR---PSARPEF 216
>At4g20430.1 68417.m02981 subtilase family protein contains Pfam
profile: PF00082 subtilase family
Length = 856
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = -3
Query: 429 LFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINVV 250
+FDT E L G+ F +TGT ++ IS GS D L I+VS+ N
Sbjct: 714 IFDTSFEDYMSFLCGINGSAPVVFNYTGTNCLRNNATIS--GS-DLNLPSITVSKLNNTR 770
Query: 249 T*YLLVSN 226
T L++N
Sbjct: 771 TVQRLMTN 778
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 256 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 351
+D PGH F + G + D VL+VAA G
Sbjct: 273 LDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At1g30900.1 68414.m03780 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222
Length = 631
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Frame = +1
Query: 559 CPFLDGTE------TTCWSLQP-KCLGSRDGRWSVRKAKLTENASLKLSMPSCHLPP 708
CP ++G + T+C P +C ++ G WS K LT +A L C PP
Sbjct: 446 CPVVNGVQYKGDGYTSCEPYGPARCSINQGGCWSETKKGLTFSACSNLETSGCRCPP 502
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +1
Query: 256 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 435
ID PGH F G+S D A+L+V + + G+ QT E +L + + I
Sbjct: 706 IDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEFI 757
Query: 436 VGVNKMD 456
+ +NK+D
Sbjct: 758 IALNKVD 764
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +1
Query: 229 RN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 351
R+ LC +D PG+ +F M AD AV IV A G
Sbjct: 191 RSKSYLCNIMDTPGNVNFSDEMTASLRLADGAVFIVDAAQG 231
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 256 IDAPGHRDFIKNMITGTSQADCAVLIV 336
ID PGH F G+S D A+L+V
Sbjct: 114 IDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 256 IDAPGHRDFIKNMITGTSQADCAVLIV 336
ID PGH F G+S D A+L+V
Sbjct: 773 IDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g47840.1 68414.m05325 hexokinase, putative similar to hexokinase
1 [Arabidopsis thaliana] Swiss-Prot:Q42525
Length = 493
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 591 LEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 689
++ T W KG++V EGK CL EA++A
Sbjct: 189 IDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEA 221
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 747
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 527 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 628
DW+ C AHF RR +GAF A G+
Sbjct: 687 DWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGL 720
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 28.3 bits (60), Expect = 5.3
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = +1
Query: 256 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 435
ID PGH F G++ D A+L+V + G+ QT E L VK I
Sbjct: 561 IDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK-FI 612
Query: 436 VGVNKMD 456
+ +NK+D
Sbjct: 613 IALNKVD 619
>At3g18370.1 68416.m02336 C2 domain-containing protein contains Pfam
profile: PF00168 C2 domain
Length = 815
Score = 27.9 bits (59), Expect = 7.1
Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Frame = +1
Query: 520 SRRLATTQLLSLS---CPFLDGTETTCWSLQPKCLGSR-DGRWSVRKAKLTENASLKLSM 687
SR + QLL S CP L G TCWS + R D W + A KLSM
Sbjct: 134 SRLIENIQLLEFSLGSCPPLLGLHGTCWSKSGEQKIMRLDFNWDTTDLSILLQA--KLSM 191
Query: 688 P 690
P
Sbjct: 192 P 192
>At1g69900.1 68414.m08044 expressed protein contains Pfam profile:
PF04601 protein of unknown function (DUF569
Length = 397
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -1
Query: 512 GSSFLISSNLGSLYGGSVESILFTPTMS-CLTPRVKASKACSR 387
GSS I S+ GSL S ++FTP+ S L+P+ + CS+
Sbjct: 190 GSSESIGSDPGSLVSVSSSKLMFTPSRSGTLSPK-PTERKCSK 231
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,631,354
Number of Sequences: 28952
Number of extensions: 362851
Number of successful extensions: 1089
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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