Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00040
(729 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g18300.1 68414.m02286 MutT/nudix family protein similar to SP... 47 1e-05
At1g73540.1 68414.m08512 MutT/nudix family protein low similarit... 44 8e-05
At1g14860.1 68414.m01777 MutT/nudix family protein low similarit... 40 0.002
At1g12880.1 68414.m01496 MutT/nudix family protein similar to di... 39 0.004
At2g01670.1 68415.m00094 MutT/nudix family protein similar to SP... 37 0.012
At3g26690.2 68416.m03338 MutT/nudix family protein similar to SP... 30 1.4
At3g26690.1 68416.m03337 MutT/nudix family protein similar to SP... 30 1.4
At1g35350.1 68414.m04383 EXS family protein / ERD1/XPR1/SYG1 fam... 28 5.5
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 28 7.3
At1g26730.1 68414.m03255 EXS family protein / ERD1/XPR1/SYG1 fam... 27 9.6
>At1g18300.1 68414.m02286 MutT/nudix family protein similar to
SP|Q09790 Diadenosine 5',5'''-P1,P6-hexaphosphate
hydrolase (EC 3.6.1.-) (Ap6A hydrolase)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00293: NUDIX domain
Length = 207
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Frame = +1
Query: 514 AMREVLEEAGVIGKLGRCLG--VFENREHK--HRTEVYVMTVTQELPEWEDSRLMGRKRQ 681
A+RE +EEAGV G+L LG ++++ H H ++ + V+QE W ++ + R+R+
Sbjct: 113 ALRETIEEAGVTGELEEKLGKWQYKSKRHSIIHDGYMFALLVSQEFERWPEAEM--RQRR 170
Query: 682 WFSIDDA 702
W S+D+A
Sbjct: 171 WVSLDEA 177
>At1g73540.1 68414.m08512 MutT/nudix family protein low similarity
to SP|Q09790 Diadenosine 5',5'''-P1,P6-hexaphosphate
hydrolase (EC 3.6.1.-) (Ap6A hydrolase)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00293: NUDIX domain
Length = 198
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Frame = +1
Query: 514 AMREVLEEAGVIGKLGRCLGVFENREHKHRT----EVYVMTVTQELPEWEDSRLMGRKRQ 681
A+RE +EEAGV G+L LG ++ + +H ++ + V+Q+ W +S R+R+
Sbjct: 110 ALRETIEEAGVTGQLEESLGKWQYKSKRHTMIHDGHMFPLLVSQQFEIWPESEF--RQRK 167
Query: 682 WFSIDDAL 705
W S+ +A+
Sbjct: 168 WVSLSEAI 175
>At1g14860.1 68414.m01777 MutT/nudix family protein low similarity
to SP|Q09790 Diadenosine 5',5'''-P1,P6-hexaphosphate
hydrolase (EC 3.6.1.-) (Ap6A hydrolase)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00293: NUDIX domain
Length = 176
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Frame = +1
Query: 514 AMREVLEEAGVIGKLGRCLGVFE----NREHKHRTEVYVMTVTQELPEWEDSRLMGRKRQ 681
A RE LEEAGV+G + R LG ++ ++ + ++ M V +EL W + L R+R
Sbjct: 72 ASRESLEEAGVVGNVERQLGKWDFLSKSKGTFYEGFMFPMLVKEELELWPEQHL--RQRI 129
Query: 682 WFSIDDA 702
W +D+A
Sbjct: 130 WMKVDEA 136
>At1g12880.1 68414.m01496 MutT/nudix family protein similar to
diphosphoinositol polyphosphate phosphohydrolase [Homo
sapiens] GI:3978224; contains Pfam profile PF00293:
NUDIX domain
Length = 203
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 11/75 (14%)
Frame = +1
Query: 514 AMREVLEEAGVIGKLGRC-LGVFENREHKHRTE----------VYVMTVTQELPEWEDSR 660
A RE +EEAGV G L LGV+E R E ++ + VT+EL +W + +
Sbjct: 78 ASREAIEEAGVKGILRELPLGVWEFRSKSSTVEDECLGGCKGYMFALKVTEELEDWPERK 137
Query: 661 LMGRKRQWFSIDDAL 705
R+R+W ++ +AL
Sbjct: 138 --NRERRWLTVKEAL 150
>At2g01670.1 68415.m00094 MutT/nudix family protein similar to
SP|Q09790 Diadenosine 5',5'''-P1,P6-hexaphosphate
hydrolase (EC 3.6.1.-) (Ap6A hydrolase)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00293: NUDIX domain
Length = 182
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Frame = +1
Query: 514 AMREVLEEAGVIGKLGRCLGVFE----NREHKHRTEVYVMTVTQELPEWEDSRLMGRKRQ 681
A RE LEEAGV+G + LG ++ +R + ++ M VT++L W + + R+R
Sbjct: 77 ASRECLEEAGVLGNVEHQLGKWDFLSKSRGTYYEGLMFPMLVTEQLELWPEQHV--RQRI 134
Query: 682 WFSIDDA 702
W ++ +A
Sbjct: 135 WMNVTEA 141
>At3g26690.2 68416.m03338 MutT/nudix family protein similar to
SP|Q09790 Diadenosine 5',5'''-P1,P6-hexaphosphate
hydrolase (EC 3.6.1.-) (Ap6A hydrolase)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00293: NUDIX domain
Length = 202
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Frame = +1
Query: 514 AMREVLEEAGVIGKLGR-CLGVFENREHKHRTE------------VYVMTVTQELPEWED 654
A RE +EEAGV G L LGV+E R E ++ + V +EL W +
Sbjct: 77 ASREAMEEAGVKGILREDPLGVWEFRSKSSSVEADCCLGGGCKGYMFALEVKEELAIWPE 136
Query: 655 SRLMGRKRQWFSIDDAL 705
R+R+W ++ +AL
Sbjct: 137 QD--DRERRWLNVKEAL 151
>At3g26690.1 68416.m03337 MutT/nudix family protein similar to
SP|Q09790 Diadenosine 5',5'''-P1,P6-hexaphosphate
hydrolase (EC 3.6.1.-) (Ap6A hydrolase)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00293: NUDIX domain
Length = 202
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Frame = +1
Query: 514 AMREVLEEAGVIGKLGR-CLGVFENREHKHRTE------------VYVMTVTQELPEWED 654
A RE +EEAGV G L LGV+E R E ++ + V +EL W +
Sbjct: 77 ASREAMEEAGVKGILREDPLGVWEFRSKSSSVEADCCLGGGCKGYMFALEVKEELAIWPE 136
Query: 655 SRLMGRKRQWFSIDDAL 705
R+R+W ++ +AL
Sbjct: 137 QD--DRERRWLNVKEAL 151
>At1g35350.1 68414.m04383 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 747
Score = 28.3 bits (60), Expect = 5.5
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -3
Query: 325 CLQTRKHE-RNERSQN*YRH*LKRKL*NEQNFLMINKRHIRCILCRTYPFSTIKLHNVHK 149
CL+T E + + ++ + LKRKL +NF + KR+ R R I +H
Sbjct: 24 CLKTILREIKTSQKRSESQGVLKRKLSGRRNFSGLTKRYSRTFSSRDLENHDIMVHATTG 83
Query: 148 KSNYNNNKTTI 116
+ +TTI
Sbjct: 84 DDGFEKYETTI 94
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = -1
Query: 468 IQLSGRLEDVTSRTSVSASERTQIHA 391
+QLSGRL+ VT++ + +A +TQI A
Sbjct: 546 LQLSGRLQLVTAQINKAAGSQTQITA 571
>At1g26730.1 68414.m03255 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 750
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -3
Query: 265 LKRKL*NEQNFLMINKRHIRCILCRTYPFSTIKLHNVHKKSNYNNNKTTI 116
LKRKL +NF + KR+ R R I +H + +TTI
Sbjct: 45 LKRKLSGSRNFSGLTKRYSRTASTREPEIQDILVHATTGDDGFERYETTI 94
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,972,478
Number of Sequences: 28952
Number of extensions: 291296
Number of successful extensions: 619
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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