Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0230.Seq
(459 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g10270.1 68414.m01157 pentatricopeptide (PPR) repeat-containi... 33 0.12
At2g24570.1 68415.m02934 WRKY family transcription factor identi... 30 0.65
At3g26910.1 68416.m03367 hydroxyproline-rich glycoprotein family... 29 2.0
At1g73240.1 68414.m08476 expressed protein 29 2.0
At4g27180.1 68417.m03904 kinesin-like protein B (KATB) 28 2.6
At4g03120.1 68417.m00425 proline-rich family protein similar to ... 28 3.5
At1g54990.1 68414.m06281 expressed protein 28 3.5
At4g28520.3 68417.m04081 12S seed storage protein, putative / cr... 27 4.6
At4g28520.2 68417.m04079 12S seed storage protein, putative / cr... 27 4.6
At4g28520.1 68417.m04080 12S seed storage protein, putative / cr... 27 4.6
At4g21270.1 68417.m03074 kinesin-like protein A (KATA) 27 4.6
At4g05190.1 68417.m00781 kinesin-like protein A, putative kinesi... 27 4.6
At2g23660.1 68415.m02823 LOB domain family protein / lateral org... 27 4.6
At2g04170.1 68415.m00402 meprin and TRAF homology domain-contain... 27 4.6
At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein ... 27 4.6
At5g66310.1 68418.m08360 kinesin motor family protein contains P... 27 6.1
At5g59390.1 68418.m07442 XH/XS domain-containing protein contain... 27 6.1
At5g47530.1 68418.m05868 auxin-responsive protein, putative simi... 27 6.1
At2g25730.1 68415.m03084 expressed protein 27 6.1
At1g75130.1 68414.m08725 cytochrome P450 family protein similar ... 27 8.1
>At1g10270.1 68414.m01157 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile: PF01535 PPR repeat;
similar to ESTs gb|R30192 and gb|AA651017
Length = 913
Score = 32.7 bits (71), Expect = 0.12
Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +3
Query: 180 GPQRQACSAFQGQVKRV--QRAGEQGQPAGYNRGSSL-WWQQFSGHFRKYRQRS*KWARR 350
G Q+Q + GQ ++ Q G+Q Q A N G W Q +GH Q+S WA +
Sbjct: 755 GQQQQLANQTPGQQQQWANQTPGQQQQWANQNNGHQQPWANQNTGH-----QQS--WANQ 807
Query: 351 VPLWD*PISGQR*WTNKFAKGQQVWGGSGPG 443
P S Q+ W N+ QQ WG G
Sbjct: 808 TP------SQQQPWANQTTGQQQGWGNQTTG 832
Score = 31.1 bits (67), Expect = 0.37
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +3
Query: 231 QRAGEQGQPAGYNRGSSLWWQQFSGHFRKYRQRS*KWARRVPLWD*PISGQR*WTNKFAK 410
Q+ Q AG S W +Q G Y+Q+ W+++ W P Q+ WTN+ A
Sbjct: 682 QQQSWSNQTAGQQPPS--WSRQAPG----YQQQQ-SWSQQSG-WSSPSGHQQSWTNQTAG 733
Query: 411 GQQVWGGSGPG 443
QQ W PG
Sbjct: 734 QQQPWANQTPG 744
>At2g24570.1 68415.m02934 WRKY family transcription factor identical
to WRKY transcription factor 17 GI:15991743 from
[Arabidopsis thaliana]
Length = 321
Score = 30.3 bits (65), Expect = 0.65
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -1
Query: 300 RIVATTRRSRGCTRRVGPVHRPAVRALPGPGMRCTPGAVGLGAP 169
++++ RS R GPVH P ++P P TP + AP
Sbjct: 59 KVISLLNRSGHARFRRGPVHSPPSSSVPPPVKVTTPAPTQISAP 102
>At3g26910.1 68416.m03367 hydroxyproline-rich glycoprotein family
protein common family member:At2g33490 [Arabidopsis
thaliana]
Length = 608
Score = 28.7 bits (61), Expect = 2.0
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = -1
Query: 315 SESDPRIVATTRRSRGCTRRVGPVH---RPAVRALPGPGMRCTPGAVGLGAPL 166
S S PR+ T + R+ +H RP P P +PG VG APL
Sbjct: 469 SSSSPRVSPTASPPPASSPRLNELHELPRPPGHFAPPPRRAKSPGLVGHSAPL 521
>At1g73240.1 68414.m08476 expressed protein
Length = 519
Score = 28.7 bits (61), Expect = 2.0
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -1
Query: 447 RTRARSPPKLVGPLQICWSTNA-ARKWVSP 361
+T +SP +L+GP I W+T++ RK V P
Sbjct: 417 KTNLQSPQQLMGPASIKWATSSMVRKDVKP 446
>At4g27180.1 68417.m03904 kinesin-like protein B (KATB)
Length = 745
Score = 28.3 bits (60), Expect = 2.6
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 175 SPSPPTRGRSAQTLSPTARVRACEIST 95
+P P + G S +L ARV ACEI T
Sbjct: 702 TPEPSSTGESLCSLRFAARVNACEIGT 728
>At4g03120.1 68417.m00425 proline-rich family protein similar to U1
small nuclear ribonucleoprotein C; contains proline rich
extensin domains, INTERPRO:IPR002965
Length = 207
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 322 GSVPENGQDGFPSGTNPFPGSVSGP 396
G P GQ G P G P PG GP
Sbjct: 139 GMAPIPGQGGGPPGMAPIPGQGGGP 163
>At1g54990.1 68414.m06281 expressed protein
Length = 473
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 411 PLQICWSTNAARKWVSPRGEPVLPIFRNAAGISESDPR 298
P+Q+ WS+ A+++W S G+ V A ++ S R
Sbjct: 361 PMQVIWSSEASKEW-SDEGQRVAKALPKAKFVTHSGSR 397
>At4g28520.3 68417.m04081 12S seed storage protein, putative /
cruciferin, putative strong similarity to SP|P33525
Cruciferin CRU1 precursor (11S globulin) (12S storage
protein) from Brassica napus; contains Pfam profile
PF00190 Cupin and Prosite 11-S plant seed storage
proteins signature PS00305 isoform contains
non-consensus AC acceptor splice site at intron 3
Length = 453
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +3
Query: 165 GEGLQGPQRQACSAFQGQVKRVQ--RAGEQGQP 257
G+G QG Q + ++GQ ++ Q R G+QGQP
Sbjct: 145 GQGQQGQQGRQGQPWEGQGQQGQQGRQGQQGQP 177
>At4g28520.2 68417.m04079 12S seed storage protein, putative /
cruciferin, putative strong similarity to SP|P33525
Cruciferin CRU1 precursor (11S globulin) (12S storage
protein) from Brassica napus; contains Pfam profile
PF00190 Cupin and Prosite 11-S plant seed storage
proteins signature PS00305 isoform contains
non-consensus AC acceptor splice site at intron 3
Length = 394
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +3
Query: 165 GEGLQGPQRQACSAFQGQVKRVQ--RAGEQGQP 257
G+G QG Q + ++GQ ++ Q R G+QGQP
Sbjct: 145 GQGQQGQQGRQGQPWEGQGQQGQQGRQGQQGQP 177
>At4g28520.1 68417.m04080 12S seed storage protein, putative /
cruciferin, putative strong similarity to SP|P33525
Cruciferin CRU1 precursor (11S globulin) (12S storage
protein) from Brassica napus; contains Pfam profile
PF00190 Cupin and Prosite 11-S plant seed storage
proteins signature PS00305 isoform contains
non-consensus AC acceptor splice site at intron 3
Length = 524
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +3
Query: 165 GEGLQGPQRQACSAFQGQVKRVQ--RAGEQGQP 257
G+G QG Q + ++GQ ++ Q R G+QGQP
Sbjct: 145 GQGQQGQQGRQGQPWEGQGQQGQQGRQGQQGQP 177
>At4g21270.1 68417.m03074 kinesin-like protein A (KATA)
Length = 793
Score = 27.5 bits (58), Expect = 4.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 175 SPSPPTRGRSAQTLSPTARVRACEI 101
SP P + G S +L ARV ACEI
Sbjct: 750 SPDPTSAGESLCSLRFAARVNACEI 774
>At4g05190.1 68417.m00781 kinesin-like protein A, putative kinesin
like protein A, Arabidopsis thaliana, gb:Q07970
Length = 790
Score = 27.5 bits (58), Expect = 4.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 175 SPSPPTRGRSAQTLSPTARVRACEI 101
SP P + G S +L ARV ACEI
Sbjct: 747 SPDPSSTGESLCSLRFAARVNACEI 771
>At2g23660.1 68415.m02823 LOB domain family protein / lateral organ
boundaries domain family protein (LBD10) identical to
SP|O64836 Putative LOB domain protein 10 {Arabidopsis
thaliana}; similar to lateral organ boundaries (LOB)
domain-containing proteins from Arabidopsis thaliana
Length = 311
Score = 27.5 bits (58), Expect = 4.6
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 195 PGAVGLGAPLRRREAGL-RRHSHRPPEYELVRF 100
PG + G PL RE + ++H H+ P+ E ++F
Sbjct: 140 PGVIPQGEPLMIREPNMSQQHHHQQPQDEQLQF 172
>At2g04170.1 68415.m00402 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to NtN2 [Medicago truncatula] GI:3776084; contains Pfam
profile PF00917: MATH domain
Length = 420
Score = 27.5 bits (58), Expect = 4.6
Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 310 FGNTGSVPENGQDG-FPSGTN-PFPGSVSGPTNLQRANKFGGAPGPGS 447
FG G P +G G P G P PG SGP R + GG GPGS
Sbjct: 64 FGPRGPGPWSGPRGPRPGGGGGPGPGPWSGP----RGPRPGGGGGPGS 107
>At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein
contains Pfam profile: PF01363 FYVE zinc finger
Length = 601
Score = 27.5 bits (58), Expect = 4.6
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 355 PSGTNPFPGSVSGPTNLQRANKFGGAP 435
P+ + P P +V+GPT+L R N + AP
Sbjct: 28 PNPSPPAPATVAGPTDLTR-NTYASAP 53
>At5g66310.1 68418.m08360 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1063
Score = 27.1 bits (57), Expect = 6.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 298 SRVTFGNTGSVPENGQDGFPSGTNPFPGSVSGPTNLQ 408
S ++ G ++PE+ D + + T P SV+ P NLQ
Sbjct: 574 SDISIGPVENMPESSPDKYEAVTAEEPVSVTEPKNLQ 610
>At5g59390.1 68418.m07442 XH/XS domain-containing protein contains
Pfam domain PF03469: XH domain and PF03468: XS domain
Length = 561
Score = 27.1 bits (57), Expect = 6.1
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -3
Query: 247 CSPARCTRFTWPWNALHAWRCGPWSPSPPTRGRSAQTL 134
CS + RF WPW L A PS G+S TL
Sbjct: 26 CSVQQQQRFVWPWVGLVANIPTEVEPSGRRVGKSGSTL 63
>At5g47530.1 68418.m05868 auxin-responsive protein, putative similar
to auxin-induced protein AIR12 (GI:11357190)
[Arabidopsis thaliana]; similar to stromal cell derived
factor receptor 2 (GI:20381292) [Mus musculus]
Length = 395
Score = 27.1 bits (57), Expect = 6.1
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +1
Query: 316 NTGSVPENGQDGFPSGTNPFPGSVSGPT--NLQRANKFGGAPGPGSPEA 456
N G + QDG SG NP P SG ++ N GA G S A
Sbjct: 151 NGGIINTVWQDGSLSGNNPLPHPTSGNNVRSVSTLNLVSGASGSTSTGA 199
>At2g25730.1 68415.m03084 expressed protein
Length = 2464
Score = 27.1 bits (57), Expect = 6.1
Identities = 11/40 (27%), Positives = 17/40 (42%)
Frame = -3
Query: 232 CTRFTWPWNALHAWRCGPWSPSPPTRGRSAQTLSPTARVR 113
C +P + H W C P P+ P + LSP+ +
Sbjct: 1086 CVPPVYPPRSGHGWACIPVIPTTPCSHSEGKVLSPSIEAK 1125
>At1g75130.1 68414.m08725 cytochrome P450 family protein similar to
Cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus]
Length = 505
Score = 26.6 bits (56), Expect = 8.1
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -1
Query: 375 KWVSPRGEPVLPIFRNAAGISESDPRIVATTRRSRGCTRRVGPVHRPAVRALPGPGMRCT 196
+W G+ L F + ++ SDPR++ + G R+G H P + L G+
Sbjct: 84 EWSRVYGKTFLYWFGSKPVVATSDPRLIREALTTGGSFDRIG--HNPLSKLLYAQGL--- 138
Query: 195 PGAVGLGAPLRRREA 151
PG G RR A
Sbjct: 139 PGLRGDQWAFHRRIA 153
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,838,506
Number of Sequences: 28952
Number of extensions: 215977
Number of successful extensions: 701
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 762235320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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