Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0226.Seq
(568 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 131 3e-31
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 131 3e-31
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 129 1e-30
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 127 4e-30
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 127 4e-30
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 127 4e-30
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 127 4e-30
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 127 4e-30
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 127 4e-30
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 127 4e-30
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 127 4e-30
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 127 4e-30
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 127 4e-30
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 127 4e-30
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 127 4e-30
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 127 4e-30
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 127 4e-30
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 127 4e-30
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 127 4e-30
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 127 4e-30
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 126 1e-29
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 126 1e-29
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 120 9e-28
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 103 1e-22
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 80 1e-15
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 63 1e-10
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 62 3e-10
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 55 4e-08
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 52 3e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 52 3e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 48 3e-06
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 48 4e-06
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 46 1e-05
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 46 1e-05
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 46 1e-05
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 46 1e-05
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 46 1e-05
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 46 1e-05
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 45 3e-05
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 45 3e-05
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 45 4e-05
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 44 5e-05
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 44 9e-05
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 44 9e-05
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 42 3e-04
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 42 4e-04
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 41 7e-04
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 40 0.001
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 40 0.001
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 40 0.002
At5g16090.1 68418.m01880 ubiquitin family protein contains INTER... 38 0.004
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 38 0.006
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 38 0.006
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 37 0.011
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 36 0.014
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 35 0.044
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 35 0.044
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 34 0.058
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 33 0.18
At1g11970.1 68414.m01383 hypothetical protein 33 0.18
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 32 0.23
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 30 0.94
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 1.2
At1g47680.1 68414.m05297 hypothetical protein 29 1.6
At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal... 29 2.2
At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming] beta-... 27 6.6
At1g78020.1 68414.m09092 senescence-associated protein-related s... 27 8.7
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 131 bits (317), Expect = 3e-31
Identities = 74/144 (51%), Positives = 78/144 (54%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQXESTLHLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXN*PSSGFXXXXXXXXXXXXXAS 371
IQ ESTLHLV F
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKE 120
Query: 372 XRXEQCXAGVFXAVMXDRNYCXKC 443
C AG F A DR+YC KC
Sbjct: 121 CPNATCGAGTFMASHFDRHYCGKC 144
Score = 35.5 bits (78), Expect = 0.025
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 251 QEKNYSTPXXXXXXXXXXXLAVLRFYKVDENGKXHRLXRE 370
++K Y+ P LAVL+FYK+D +GK RL +E
Sbjct: 81 KKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKE 120
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 131 bits (317), Expect = 3e-31
Identities = 74/144 (51%), Positives = 78/144 (54%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQXESTLHLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXN*PSSGFXXXXXXXXXXXXXAS 371
IQ ESTLHLV F
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKE 120
Query: 372 XRXEQCXAGVFXAVMXDRNYCXKC 443
C AG F A DR+YC KC
Sbjct: 121 CPNATCGAGTFMASHFDRHYCGKC 144
Score = 35.9 bits (79), Expect = 0.019
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 251 QEKNYSTPXXXXXXXXXXXLAVLRFYKVDENGKXHRLXRE 370
++K Y+ P LAVL+FYKVD +GK RL +E
Sbjct: 81 KKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKE 120
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 129 bits (312), Expect = 1e-30
Identities = 73/144 (50%), Positives = 77/144 (53%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQXESTLHLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXN*PSSGFXXXXXXXXXXXXXAS 371
IQ ESTLHLV F
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKE 120
Query: 372 XRXEQCXAGVFXAVMXDRNYCXKC 443
C G F A DR+YC KC
Sbjct: 121 CPSVSCGPGTFMASHFDRHYCGKC 144
Score = 35.9 bits (79), Expect = 0.019
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 251 QEKNYSTPXXXXXXXXXXXLAVLRFYKVDENGKXHRLXRE 370
++K Y+ P LAVL+FYKVD +GK RL +E
Sbjct: 81 KKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKE 120
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 365 IQKESTLHLV 374
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 289 IQKESTLHLV 298
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 289 IQKESTLHLV 298
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 61.7 bits (143), Expect = 3e-10
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKE 113
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 29.5 bits (63), Expect = 1.6
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 91 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTXSRXNPPSTWC*GFVVALRN 249
K K + K L + S LESS +MDV TT SR + TW FVV ++
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 307
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 61.7 bits (143), Expect = 3e-10
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKE 113
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 29.5 bits (63), Expect = 1.6
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 91 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTXSRXNPPSTWC*GFVVALRN 249
K K + K L + S LESS +MDV TT SR + TW FVV ++
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 459
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 61.7 bits (143), Expect = 3e-10
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKE 113
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 29.5 bits (63), Expect = 1.6
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 91 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTXSRXNPPSTWC*GFVVALRN 249
K K + K L + S LESS +MDV TT SR + TW FVV ++
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 383
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 61.7 bits (143), Expect = 3e-10
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKE 113
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 29.5 bits (63), Expect = 1.6
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 91 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTXSRXNPPSTWC*GFVVALRN 249
K K + K L + S LESS +MDV TT SR + TW FVV ++
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 459
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 61.7 bits (143), Expect = 3e-10
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKE 113
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 29.5 bits (63), Expect = 1.6
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 91 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTXSRXNPPSTWC*GFVVALRN 249
K K + K L + S LESS +MDV TT SR + TW FVV ++
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 383
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 213 IQKESTLHLV 222
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 289 IQKESTLHLV 298
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 213 IQKESTLHLV 222
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 289 IQKESTLHLV 298
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 61 IQKESTLHLV 70
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 61 IQKESTLHLV 70
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 92.3 bits (219), Expect = 2e-19
Identities = 40/66 (60%), Positives = 53/66 (80%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYXIQXE 203
VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DY I+
Sbjct: 81 VKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGG 140
Query: 204 STLHLV 221
S LHLV
Sbjct: 141 SVLHLV 146
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 124 bits (299), Expect = 4e-29
Identities = 61/70 (87%), Positives = 64/70 (91%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKE IPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 212 IQKESTLHLV 221
Score = 120 bits (289), Expect = 7e-28
Identities = 61/70 (87%), Positives = 64/70 (91%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+D
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 136 IQKESTLHLV 145
Score = 94.3 bits (224), Expect = 5e-20
Identities = 46/53 (86%), Positives = 48/53 (90%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG 170
MQ VKTLTGKTITLEVE S TI+NVKAKIQDKEGIPP+QQRLIFAGKQLE G
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 127 bits (307), Expect = 4e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 92.3 bits (219), Expect = 2e-19
Identities = 40/66 (60%), Positives = 53/66 (80%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYXIQXE 203
VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DY I+
Sbjct: 81 VKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGG 140
Query: 204 STLHLV 221
S LHLV
Sbjct: 141 SVLHLV 146
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 126 bits (304), Expect = 1e-29
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+N+KAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 121 bits (292), Expect = 3e-28
Identities = 60/70 (85%), Positives = 63/70 (90%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEGI P+QQRLIFAGKQ EDGRTL+DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYN 212
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 113 bits (272), Expect = 8e-26
Identities = 54/70 (77%), Positives = 61/70 (87%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ +KTLTGKT LEVE SDTI+NVKAKIQD EGIPP+Q RLIFAGKQLEDGRTL+DY
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 192 IQXESTLHLV 221
+Q +STLHL+
Sbjct: 61 VQEDSTLHLL 70
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 126 bits (303), Expect = 1e-29
Identities = 60/70 (85%), Positives = 65/70 (92%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VKTLTGKTITLEVE SDTI+NVKAKIQDKEG+PP+QQRLIFAGKQL+DGRTL+DY
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 139 IQKESTLHLV 148
Score = 119 bits (286), Expect = 2e-27
Identities = 58/70 (82%), Positives = 62/70 (88%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ V+TLT KTI LEVE SDT +NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DY
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 215 IQKESTLHLV 224
Score = 110 bits (264), Expect = 7e-25
Identities = 57/71 (80%), Positives = 61/71 (85%), Gaps = 1/71 (1%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG-RTLSDY 188
MQ V TLTGKTITLEVE SDTI+NVKAKIQDKE I P+QQRLIFAG+QLEDG TL+DY
Sbjct: 231 MQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADY 290
Query: 189 XIQXESTLHLV 221
IQ ESTLHLV
Sbjct: 291 NIQKESTLHLV 301
Score = 99 bits (238), Expect = 1e-21
Identities = 49/71 (69%), Positives = 57/71 (80%)
Frame = +3
Query: 6 VKMQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSD 185
+ MQ KTLT KTIT++V SDTI NVKAKIQD EGIP +QQRLIF+GK L+DGRTL+D
Sbjct: 1 MSMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLAD 60
Query: 186 YXIQXESTLHL 218
Y IQ +S LHL
Sbjct: 61 YSIQKDSILHL 71
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 120 bits (288), Expect = 9e-28
Identities = 59/70 (84%), Positives = 63/70 (90%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ V+TLTGKTITLEV+ SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DY
Sbjct: 79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 139 IQKESTLHLV 148
Score = 108 bits (260), Expect = 2e-24
Identities = 54/70 (77%), Positives = 60/70 (85%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
+Q KTLT KTITL+VE SD+I NVKAKIQ+KEGIP +QQRLIFAGKQLEDG TL+DY
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62
Query: 192 IQXESTLHLV 221
IQ ESTLHLV
Sbjct: 63 IQKESTLHLV 72
Score = 99.1 bits (236), Expect = 2e-21
Identities = 53/75 (70%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Frame = +3
Query: 3 RVKMQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI--PPNQQRLIFAGKQLEDGRT 176
R MQ VKTLT K I LEVE DTIENVKA +QDKEGI PN QRLIF GK+L+DG T
Sbjct: 316 RCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCT 375
Query: 177 LSDYXIQXESTLHLV 221
L+DY IQ ESTLHLV
Sbjct: 376 LADYSIQKESTLHLV 390
Score = 98.7 bits (235), Expect = 2e-21
Identities = 50/70 (71%), Positives = 55/70 (78%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ +KTLTGKTI LEVE SDTI NVK KIQ KEGI P+QQ LIF G+QLEDG TL DY
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYD 611
Query: 192 IQXESTLHLV 221
I +STL+LV
Sbjct: 612 IHKKSTLYLV 621
Score = 93.9 bits (223), Expect = 7e-20
Identities = 47/69 (68%), Positives = 53/69 (76%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
MQ VK GK ITLEV SDTI++VKAKIQDK G PP+QQ L+F G QL+DGRTL DY
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452
Query: 192 IQXESTLHL 218
I+ ESTLHL
Sbjct: 453 IRNESTLHL 461
Score = 84.2 bits (199), Expect = 5e-17
Identities = 42/64 (65%), Positives = 49/64 (76%)
Frame = +3
Query: 30 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYXIQXEST 209
+ TG+ LEVE SDTI+NVKAK+QDKE IP + RLIFAGK LE GRTL+ Y IQ ST
Sbjct: 249 SFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGST 308
Query: 210 LHLV 221
L+LV
Sbjct: 309 LYLV 312
Score = 83.4 bits (197), Expect = 9e-17
Identities = 46/76 (60%), Positives = 56/76 (73%), Gaps = 7/76 (9%)
Frame = +3
Query: 12 MQXXVKTLTGK-----TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQL--EDG 170
MQ V T +GK T+TL+VE SDTIENVKAKIQD+EG+ P+ QRLIF G++L ED
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214
Query: 171 RTLSDYXIQXESTLHL 218
RTL+DY I+ STL L
Sbjct: 215 RTLADYGIRNRSTLCL 230
Score = 80.2 bits (189), Expect = 9e-16
Identities = 41/63 (65%), Positives = 47/63 (74%)
Frame = +3
Query: 27 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYXIQXES 206
+T T KTITLEVE SDTI+NVK KIQ K GIP ++QRLIF G+ L RTL DY IQ S
Sbjct: 481 ETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGS 540
Query: 207 TLH 215
T+H
Sbjct: 541 TIH 543
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 103 bits (246), Expect = 1e-22
Identities = 48/66 (72%), Positives = 56/66 (84%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYXIQXE 203
+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP +QQRLIF GKQLEDG TL+DY IQ +
Sbjct: 90 IKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYNIQND 149
Query: 204 STLHLV 221
S LHL+
Sbjct: 150 SILHLI 155
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 79.8 bits (188), Expect = 1e-15
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
M+ VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T Y
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 192 IQXESTLHLV 221
++ S LHLV
Sbjct: 61 LERGSVLHLV 70
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 63.3 bits (147), Expect = 1e-10
Identities = 28/70 (40%), Positives = 44/70 (62%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 192 IQXESTLHLV 221
++ TLHL+
Sbjct: 84 LENGHTLHLI 93
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 61.7 bits (143), Expect = 3e-10
Identities = 29/48 (60%), Positives = 36/48 (75%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 155
M +KTLTG+T T EV+ SDTI +KAK ++KEGIP QQRLIF G+
Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGR 97
Score = 56.8 bits (131), Expect = 9e-09
Identities = 29/69 (42%), Positives = 44/69 (63%)
Frame = +3
Query: 6 VKMQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSD 185
V M+ V T+ KT LEV+ SDTI+ +K+ I D+ G P +QQ L G +L++ T+SD
Sbjct: 139 VLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISD 198
Query: 186 YXIQXESTL 212
Y I+ ++ L
Sbjct: 199 YNIKPDANL 207
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 54.8 bits (126), Expect = 4e-08
Identities = 27/72 (37%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +3
Query: 9 KMQXXVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSD 185
++Q V+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+
Sbjct: 94 RLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTY 153
Query: 186 YXIQXESTLHLV 221
Y I+ +++L LV
Sbjct: 154 YSIEQDASLQLV 165
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 52.0 bits (119), Expect = 3e-07
Identities = 21/66 (31%), Positives = 38/66 (57%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYXIQXE 203
++ G +++ T+E+ K + +P NQQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 204 STLHLV 221
T+H+V
Sbjct: 82 HTIHMV 87
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 52.0 bits (119), Expect = 3e-07
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = +3
Query: 6 VKMQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSD 185
V + V+ G ++ T+E+ K I +P NQQRLI+ G+ L+D +TL
Sbjct: 16 VAVAVNVRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLS 75
Query: 186 YXIQXESTLHLV 221
Y +Q + T+H+V
Sbjct: 76 YGLQADHTVHMV 87
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 48.4 bits (110), Expect = 3e-06
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
M + T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 192 IQXESTLHL 218
I ES L L
Sbjct: 61 ILFESRLLL 69
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 48.0 bits (109), Expect = 4e-06
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
M + T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 192 IQXESTL 212
I ES L
Sbjct: 61 ILFESLL 67
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 46.4 bits (105), Expect = 1e-05
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSD 185
M+ VKTL+G +EV+P+D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 186 YXIQXES 206
+ S
Sbjct: 61 NNVVENS 67
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 46.4 bits (105), Expect = 1e-05
Identities = 21/70 (30%), Positives = 42/70 (60%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
M+ V T + ITL+V+ +T+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 192 IQXESTLHLV 221
++ + L ++
Sbjct: 61 VKDDDLLMMM 70
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 46.4 bits (105), Expect = 1e-05
Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 182
M+ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 183 DYXIQXESTL 212
+ + E L
Sbjct: 61 ENKVTEEGFL 70
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 46.4 bits (105), Expect = 1e-05
Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 182
M+ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 183 DYXIQXESTL 212
+ + E L
Sbjct: 61 ENKVTEEGFL 70
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 46.4 bits (105), Expect = 1e-05
Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 182
M+ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 183 DYXIQXESTL 212
+ + E L
Sbjct: 61 ENKVTEEGFL 70
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 46.4 bits (105), Expect = 1e-05
Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPNQQRLIFAGKQLEDGRTLS 182
M+ VKTL G + V P+DTI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 183 DYXIQXESTL 212
+ + E L
Sbjct: 61 ENKVTEEGFL 70
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 45.2 bits (102), Expect = 3e-05
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYXIQ 197
VKT GK VE I VK +I K G + P++Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 198 XESTLHLV 221
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 45.2 bits (102), Expect = 3e-05
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYXIQ 197
VKT GK VE I VK +I K G + P++Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 198 XESTLHLV 221
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
M+ V+ +G T ++++ DT+ K KI+ + IP ++Q + F GK LED + ++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 192 IQXESTLHL 218
I LHL
Sbjct: 61 ILQNPLLHL 69
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 44.4 bits (100), Expect = 5e-05
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDYXIQX 200
+K L T TL VE + + ++K I G+ P +Q RL+F G+ L++ + LSDY ++
Sbjct: 15 IKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDYHVEE 74
Query: 201 ESTLHLV 221
TL+LV
Sbjct: 75 GHTLYLV 81
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 43.6 bits (98), Expect = 9e-05
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 182
M+ VKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 183 DYXIQXES 206
+ + S
Sbjct: 61 ENKVAENS 68
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 43.6 bits (98), Expect = 9e-05
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 182
M+ VKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 183 DYXIQXES 206
+ + S
Sbjct: 61 ENKVAENS 68
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 41.9 bits (94), Expect = 3e-04
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 188
+Q V+ L GK++TL P E +K +I ++ IP + QRLI G Q+ DG +S
Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS-- 66
Query: 189 XIQXESTLHLV 221
Q ++T++LV
Sbjct: 67 --QPDATVNLV 75
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 41.5 bits (93), Expect = 4e-04
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +3
Query: 39 GKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYXIQXESTLHL 218
GK+I L V P T++++K+++Q + P Q+LIF GK L + TL + + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 219 V 221
+
Sbjct: 604 M 604
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 40.7 bits (91), Expect = 7e-04
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +3
Query: 3 RVKMQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTL 179
R M+ VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L
Sbjct: 658 RGSMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSL 717
Query: 180 SDYXIQXESTLHLV 221
+ +Q S +HL+
Sbjct: 718 AAQNVQPNSLVHLI 731
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKAKIQDKE---GIPPNQQRLIFAGKQLEDGRTLSDYXI 194
V+T+ GK L VE S + VK +I KE GIP + + L G++L+D R ++D
Sbjct: 113 VRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDLCQ 171
Query: 195 QXESTLHLV 221
++ +HL+
Sbjct: 172 NGDNVIHLL 180
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
M +T +G T +E+ DT+ +K KI+ + IP ++Q L+F G L+D +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 192 IQXESTLHL 218
I S + L
Sbjct: 61 ILNHSRIQL 69
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDY 188
M+ + L GK L V +++ ++KAK K + ++ + GK+LED ++L++
Sbjct: 500 MKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQ 559
Query: 189 XIQXESTLHLV 221
+Q S +HL+
Sbjct: 560 NVQPNSLVHLL 570
>At5g16090.1 68418.m01880 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 142
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 182
M+ VKTL G +EV+P+D++ VK I+ G P QQ LI ++L D T+
Sbjct: 1 MKIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTME 60
Query: 183 DYXIQXESTLHLV 221
+ +S + ++
Sbjct: 61 ANKVFDKSVIAII 73
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 37.5 bits (83), Expect = 0.006
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYXIQXE 203
++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D + I+
Sbjct: 6 IENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIRHN 65
Query: 204 STLHL 218
S + L
Sbjct: 66 SRILL 70
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 37.5 bits (83), Expect = 0.006
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYXIQXE 203
++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D + I+
Sbjct: 40 IENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIRHN 99
Query: 204 STLHL 218
S + L
Sbjct: 100 SRILL 104
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 36.7 bits (81), Expect = 0.011
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 152
M+ V+ L G + +EVE +DT+ VK KI+ + +P ++Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 36.3 bits (80), Expect = 0.014
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 152
M+ V+ L G + LEV+ DT+ VK KI+ + IP ++Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 34.7 bits (76), Expect = 0.044
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 54 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 167
L +E + T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 34.7 bits (76), Expect = 0.044
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYX 191
M +T +G +E+ DT+ +K KI+ + IP ++Q LIF G L+D +
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQDHLDIKQCV 60
Query: 192 IQXESTLHL 218
I S + +
Sbjct: 61 ILNHSHIQI 69
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 34.3 bits (75), Expect = 0.058
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 12 MQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 125
M V TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 49 MSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 167
V T++ + + ++ + T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At1g11970.1 68414.m01383 hypothetical protein
Length = 99
Score = 32.7 bits (71), Expect = 0.18
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +3
Query: 3 RVKMQXXVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 122
R + + + L+ K I +E++P D IE +K I+++ GIP
Sbjct: 40 RQRFKVKSQFLSEKKIDIEIDPMDKIEQIKEGIEEEIGIP 79
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 32.3 bits (70), Expect = 0.23
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 24 VKTLTGKTITLEVEPSDTIENVKAKI-QDKEGIPP-NQQRLIFAGKQLEDGRTLSDYXIQ 197
V T GK V+ + +K +I ++ +G P + Q ++F G++L+D R +
Sbjct: 115 VITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGICKD 174
Query: 198 XESTLHLV 221
S +HL+
Sbjct: 175 GNSVIHLL 182
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 30.3 bits (65), Expect = 0.94
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 54 LEVEPSD-TIENVKAKIQDKEGIPPNQQRLIFAGKQLED 167
LEVE + T+ ++ ++ + G+ P +LIFAGK L+D
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKD 52
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 7/46 (15%)
Frame = +3
Query: 69 SDTIENVKAKI-----QDKEGIPP--NQQRLIFAGKQLEDGRTLSD 185
S T+ ++K K+ +DKE P N +LI AGK LE+ RTL++
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAE 73
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 63 EPSDTIENVKAKIQDKEG-IPPNQQRLIFAGKQLEDGRTLSDYXIQXESTLHL 218
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 368
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 197 LDXVVREGTSIFQLLSSKDQPLLIGRDSLFVL 102
LD VR GT +F+ L+ + +GR SLF L
Sbjct: 284 LDGGVRRGTDVFKALALGASGVFVGRPSLFSL 315
>At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial, putative / succinyl-CoA
synthetase, beta chain, putative / SCS-beta, putative
identical to SP|O82662 Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor (EC 6.2.1.4)
(Succinyl-CoA synthetase, beta chain) (SCS- beta)
{Arabidopsis thaliana}; similar to SP|O97580
Succinyl-CoA ligase [ADP-forming] beta-chain,
mitochondrial precursor (EC 6.2.1.5) {Sus scrofa};
contains Pfam profiles PF00549: CoA-ligase, PF02222:
ATP-grasp domain
Length = 421
Score = 27.5 bits (58), Expect = 6.6
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 69 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYXIQXESTLHLV 221
+ ++E VK IQD + PN+ L+ + L GR L + + +H+V
Sbjct: 51 ASSLEEVKKAIQD---VFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIV 98
>At1g78020.1 68414.m09092 senescence-associated protein-related
similar to senescence-associated protein SAG102
(GI:22331931) [Arabidopsis thaliana]
Length = 162
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 109 KRESLPINRG*SLLESSWKMDVPSRTTXSRXNPPS 213
KR+ PINR SL E + +++PS + S P+
Sbjct: 5 KRQRPPINRTTSLSEIKFDLNLPSESEPSNQQKPT 39
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,362,776
Number of Sequences: 28952
Number of extensions: 151813
Number of successful extensions: 405
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 401
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1092379416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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