Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301F09f
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g20000.1 68415.m02338 cell division cycle family protein / CD... 36 0.016
At4g38600.2 68417.m05463 HECT-domain-containing protein / ubiqui... 34 0.065
At4g38600.1 68417.m05464 HECT-domain-containing protein / ubiqui... 34 0.065
At2g04620.1 68415.m00470 cation efflux family protein potential ... 34 0.065
At1g50600.1 68414.m05683 scarecrow-like transcription factor 5 (... 33 0.086
At2g47090.1 68415.m05882 zinc finger (C2H2 type) family protein ... 33 0.11
At5g64540.1 68418.m08111 hypothetical protein 33 0.15
At4g33930.1 68417.m04815 glycine-rich protein hyphally regulated... 33 0.15
At1g13160.1 68414.m01526 SDA1 family protein contains Pfam PF052... 33 0.15
At1g68100.1 68414.m07779 IAA-alanine resistance protein 1, putat... 32 0.20
At5g65170.1 68418.m08197 VQ motif-containing protein contains PF... 32 0.26
At4g32440.2 68417.m04618 agenet domain-containing protein contai... 32 0.26
At4g32440.1 68417.m04617 agenet domain-containing protein contai... 32 0.26
At3g44690.1 68416.m04806 expressed protein 31 0.35
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 31 0.46
At2g24700.1 68415.m02951 transcriptional factor B3 family protei... 31 0.46
At3g20000.1 68416.m02530 porin family protein low similarity to ... 31 0.61
At2g46020.2 68415.m05725 transcription regulatory protein SNF2, ... 31 0.61
At2g46020.1 68415.m05724 transcription regulatory protein SNF2, ... 31 0.61
At4g18820.1 68417.m02778 expressed protein 30 0.80
At2g39260.1 68415.m04821 MIF4G domain-containing protein similar... 30 0.80
At5g65210.2 68418.m08204 bZIP family transcription factor (TGA1)... 30 1.1
At5g65210.1 68418.m08203 bZIP family transcription factor (TGA1)... 30 1.1
At3g56580.2 68416.m06292 zinc finger (C3HC4-type RING finger) fa... 30 1.1
At3g56580.1 68416.m06291 zinc finger (C3HC4-type RING finger) fa... 30 1.1
At3g27700.2 68416.m03459 RNA recognition motif (RRM)-containing ... 30 1.1
At3g27700.1 68416.m03458 RNA recognition motif (RRM)-containing ... 30 1.1
At5g40450.1 68418.m04905 expressed protein 29 1.4
At3g58120.1 68416.m06481 bZIP transcription factor family protei... 29 1.4
At3g50370.1 68416.m05508 expressed protein 29 1.4
At5g41310.1 68418.m05020 kinesin motor protein-related 29 1.9
At3g47460.1 68416.m05161 SMC2-like condensin, putative similar t... 29 1.9
At2g02450.2 68415.m00185 no apical meristem (NAM) family protein... 29 1.9
At2g02450.1 68415.m00184 no apical meristem (NAM) family protein... 29 1.9
At1g73850.1 68414.m08550 expressed protein 29 1.9
At1g10320.1 68414.m01162 U2 snRNP auxiliary factor-related simil... 29 1.9
At3g54360.1 68416.m06008 expressed protein DNA-binding Mel-18 pr... 29 2.5
At2g28240.1 68415.m03428 hydroxyproline-rich glycoprotein family... 29 2.5
At1g28310.1 68414.m03474 Dof-type zinc finger domain-containing ... 28 3.2
At5g45160.1 68418.m05544 root hair defective 3 GTP-binding (RHD3... 28 4.3
At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identica... 28 4.3
At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identica... 28 4.3
At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identica... 28 4.3
At5g10770.1 68418.m01252 chloroplast nucleoid DNA-binding protei... 28 4.3
At3g55790.1 68416.m06199 expressed protein predicted protein, Ar... 28 4.3
At2g29410.1 68415.m03574 zinc transporter, putative similar to z... 28 4.3
At1g76780.1 68414.m08935 expressed protein ; expression supporte... 28 4.3
At1g25540.1 68414.m03171 phytochrome and flowering time regulato... 28 4.3
At5g66130.1 68418.m08331 cell cycle checkpoint protein-related w... 27 5.7
At5g02930.1 68418.m00236 F-box family protein low similarity to ... 27 5.7
At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein ... 27 5.7
At3g25500.1 68416.m03171 formin homology 2 domain-containing pro... 27 5.7
At1g70740.1 68414.m08154 protein kinase family protein contains ... 27 5.7
At1g05490.1 68414.m00559 C protein immunoglobulin-A-binding beta... 27 5.7
At1g04300.1 68414.m00421 meprin and TRAF homology domain-contain... 27 5.7
At5g42630.1 68418.m05189 myb family transcription factor (KAN4) ... 27 7.5
At2g05642.1 68415.m00603 expressed protein 27 7.5
At1g77800.1 68414.m09059 PHD finger family protein contains Pfam... 27 7.5
At1g74480.1 68414.m08628 RWP-RK domain-containing protein contai... 27 7.5
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 27 9.9
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 27 9.9
At5g35830.1 68418.m04305 ankyrin repeat family protein contains ... 27 9.9
At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp... 27 9.9
At4g08150.1 68417.m01346 homeobox protein knotted-1 like 1 (KNAT... 27 9.9
At3g13065.1 68416.m01632 leucine-rich repeat transmembrane prote... 27 9.9
At2g37150.2 68415.m04558 zinc finger (C3HC4-type RING finger) fa... 27 9.9
At2g37150.1 68415.m04557 zinc finger (C3HC4-type RING finger) fa... 27 9.9
At1g08440.1 68414.m00933 hypothetical protein contains Pfam prof... 27 9.9
>At2g20000.1 68415.m02338 cell division cycle family protein / CDC
family protein low similarity to SP|P30260|CC27_HUMAN
Protein CDC27Hs (Cell division cycle protein 27 homolog)
Homo sapiens; contains Pfam profile PF00515: TPR Domain
Length = 744
Score = 35.9 bits (79), Expect = 0.016
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 8/162 (4%)
Frame = +1
Query: 7 DTDSNIRHLTSERTVTSSDHGITSHQHTQQH--KNISES-HTHQTIGSTTLSSKTDQNTS 177
+T + R+ TS + +S D+ +HTQ H K+IS + H+H G + N S
Sbjct: 177 NTYNEERNSTSTKNTSSEDYSPRQSKHTQSHGLKDISGNFHSHGVNGGVS-------NMS 229
Query: 178 HYTQHSSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNV---NRQVR 348
Y ++ S V QL G + + + Q + N + S ST++S + R+
Sbjct: 230 FY----NTPSPVAAQLSGIAPPPLFRNFQPAVANPNSLITDSSPKSTVNSTLQAPRRKFV 285
Query: 349 EGSSQRIVSSDQVASTNQHHTSENKAQ--RNINSTTYITSGS 468
+ R +S + + +S A NINS+ SG+
Sbjct: 286 DEGKLRKISGRLFSDSGPRRSSRLSADSGANINSSVATVSGN 327
>At4g38600.2 68417.m05463 HECT-domain-containing protein /
ubiquitin-transferase family protein similar to
SP|Q14669Thyroid receptor interacting protein 12 (TRIP12)
{Homo sapiens}; contains Pfam profile PF00632:
HECT-domain (ubiquitin-transferase)
Length = 1794
Score = 33.9 bits (74), Expect = 0.065
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +1
Query: 70 ITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYT-QHSSSDSHVNR-QLRGESTQ 243
+T +Q Q+ + E + GS +SS + YT + DS VNR + G S+
Sbjct: 1139 LTIYQAVQRQLMLDEDDDDRFGGSDLVSSDGSRFNDIYTIMYQRPDSQVNRLSVGGASST 1198
Query: 244 RVLSSDQSSTTNQRHVSEKHSQHSTIDS 327
S +S+TTN S+ H + S +DS
Sbjct: 1199 TPSKSTKSATTNSSVESQSH-RASLLDS 1225
>At4g38600.1 68417.m05464 HECT-domain-containing protein /
ubiquitin-transferase family protein similar to
SP|Q14669Thyroid receptor interacting protein 12 (TRIP12)
{Homo sapiens}; contains Pfam profile PF00632:
HECT-domain (ubiquitin-transferase)
Length = 1888
Score = 33.9 bits (74), Expect = 0.065
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +1
Query: 70 ITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYT-QHSSSDSHVNR-QLRGESTQ 243
+T +Q Q+ + E + GS +SS + YT + DS VNR + G S+
Sbjct: 1230 LTIYQAVQRQLMLDEDDDDRFGGSDLVSSDGSRFNDIYTIMYQRPDSQVNRLSVGGASST 1289
Query: 244 RVLSSDQSSTTNQRHVSEKHSQHSTIDS 327
S +S+TTN S+ H + S +DS
Sbjct: 1290 TPSKSTKSATTNSSVESQSH-RASLLDS 1316
>At2g04620.1 68415.m00470 cation efflux family protein potential
member of the cation diffusion facilitator (CDF) family,
or cation efflux (CE) family, see PMID:11500563
Length = 798
Score = 33.9 bits (74), Expect = 0.065
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Frame = +1
Query: 64 HGITSHQH-TQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRGEST 240
H SH H ++H S+SH H+ + S K +++ H H S SH + +
Sbjct: 558 HSHQSHSHKNEEHHQHSDSHKHEEHHQHSDSHKHEEHHEH-DHHHHSHSHKHEECNHNHD 616
Query: 241 QRVLSSDQSSTTNQRHVSEKHSQHS 315
QS + N + H HS
Sbjct: 617 H----EHQSHSHNHEECNHNHDHHS 637
Score = 31.5 bits (68), Expect = 0.35
Identities = 12/61 (19%), Positives = 26/61 (42%)
Frame = +1
Query: 25 RHLTSERTVTSSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSD 204
+H S + +H H H+ +H+ + +H H+ + + + N H++ H
Sbjct: 584 QHSDSHKHEEHHEHDHHHHSHSHKHEECNHNHDHEHQSHSHNHEECNHNHDHHSDHQPEK 643
Query: 205 S 207
S
Sbjct: 644 S 644
Score = 29.9 bits (64), Expect = 1.1
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 4/114 (3%)
Frame = +1
Query: 112 ESHTHQTIGSTTLSSKTDQNTSHYTQ--HSSSDSHVNRQLRGESTQRVLSSDQSSTTNQR 285
E H H GS S + Q+ SH + H SDSH + + S ++ +
Sbjct: 543 EEHHHAHGGSGCTHSHSHQSHSHKNEEHHQHSDSHKHEEHHQHSDSH--KHEEHHEHDHH 600
Query: 286 HVSEKHSQHSTIDSNVN--RQVREGSSQRIVSSDQVASTNQHHTSENKAQRNIN 441
H S H +H + N + Q + + + S +Q SE K R+I+
Sbjct: 601 HHSHSH-KHEECNHNHDHEHQSHSHNHEECNHNHDHHSDHQPEKSEKKEHRHID 653
>At1g50600.1 68414.m05683 scarecrow-like transcription factor 5
(SCL5) similar to SCARECROW GB:AAB06318 GI:1497987 from
[Arabidopsis thaliana]
Length = 597
Score = 33.5 bits (73), Expect = 0.086
Identities = 31/122 (25%), Positives = 50/122 (40%)
Frame = +1
Query: 13 DSNIRHLTSERTVTSSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQH 192
D +++ S T+ SS G SH +KN S S T + + +S + N S + H
Sbjct: 98 DLSVQTFDSYCTLESSS-GTKSHP-CLNNKNNSSSTTSFSSNESPISQANNNNLSRFNNH 155
Query: 193 SSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQVREGSSQRIV 372
S +++ N L G S ++ S E +D++ N Q G +V
Sbjct: 156 SPEENN-NSPLSGSSATNTNETELSLMLKD---LETAMMEPDVDNSYNNQGGFGQQHGVV 211
Query: 373 SS 378
SS
Sbjct: 212 SS 213
>At2g47090.1 68415.m05882 zinc finger (C2H2 type) family protein
contains Prosite PS00028: Zinc finger, C2H2 type, domain
Length = 745
Score = 33.1 bits (72), Expect = 0.11
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 4/130 (3%)
Frame = +1
Query: 37 SERTVTSSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVN 216
SE V+++ H+ Q ++ +TT + N S + S + +N
Sbjct: 351 SESLVSNTTTTRQRHRANQGQSRFGQNSESLVSNTTTTRQRHQTNRSATSGSSQAWPALN 410
Query: 217 RQLRGES-TQRVLSSDQSSTTNQRH---VSEKHSQHSTIDSNVNRQVREGSSQRIVSSDQ 384
R S T RV SS S+ + RH V + S + + V SS +SS
Sbjct: 411 RGPAEISITSRVQSSGASAQSQSRHHDRVESTRTLASAVPQDARTTVGGCSSGSSLSSAN 470
Query: 385 VASTNQHHTS 414
N HH+S
Sbjct: 471 ATKRNNHHSS 480
>At5g64540.1 68418.m08111 hypothetical protein
Length = 440
Score = 32.7 bits (71), Expect = 0.15
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 31 LTSERTVTSSDHGI-TSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDS 207
L+ +T T+S H + T+ +Q + S+S H I STTL+ D NTS T SS
Sbjct: 272 LSGNQTPTTSSHSVPTTPSSSQLNTTTSDSPVHTPI-STTLT--VDLNTSTTTSTHSSSP 328
Query: 208 HVNR 219
V+R
Sbjct: 329 SVDR 332
>At4g33930.1 68417.m04815 glycine-rich protein hyphally regulated
protein, Candida albicans, PIR2:S58135
Length = 343
Score = 32.7 bits (71), Expect = 0.15
Identities = 27/127 (21%), Positives = 50/127 (39%), Gaps = 5/127 (3%)
Frame = +1
Query: 136 GSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHS 315
GS++ S+ + S + HSS +H + + S+ SS RH +
Sbjct: 86 GSSSGSNHSSGTGSTHNGHSSGSNHSSATGSTHNGHTSTGSNHSSGNGSRHNGYSSGSNH 145
Query: 316 TIDSNVNRQVREGSSQRIVSSDQ-----VASTNQHHTSENKAQRNINSTTYITSGSRVEQ 480
+ + N GS+ SS + ST+++H+S + + ST S
Sbjct: 146 SSSTGSNHSSSTGSTHNNHSSGSNHSSILGSTHKNHSSGSNHSSIVGSTHNNHSSGSNHS 205
Query: 481 NVTSAQH 501
++T + H
Sbjct: 206 SITGSTH 212
>At1g13160.1 68414.m01526 SDA1 family protein contains Pfam PF05285:
SDA1 domain; similar to mystery 45A
(GI:16797816){Drosophila melanogaster}
Length = 804
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/81 (19%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 154 SKTDQNTSHYTQHSSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQ-----HST 318
++ D N ++ DS ++ + G+ + V SD++ T ++ E + S+
Sbjct: 561 AEEDSNDGDDMNNTEDDSDIDTSIGGDEDEEVNDSDEADTDSENEEIESEEEDGEASDSS 620
Query: 319 IDSNVNRQVREGSSQRIVSSD 381
++ + N++ +G ++IV D
Sbjct: 621 VEDSGNKEKAKGKKRKIVDFD 641
>At1g68100.1 68414.m07779 IAA-alanine resistance protein 1, putative
similar to IAA-alanine resistance protein 1 [Arabidopsis
thaliana] SWISS-PROT:Q9M647; contains ZIP Zinc
transporter domain, Pfam:PF02535; identical to cDNA
IAA-alanine resistance protein 1 mRNA GI:6942042
Length = 469
Score = 32.3 bits (70), Expect = 0.20
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Frame = +1
Query: 118 HTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVN--RQLRGESTQRVLSSDQSSTTNQRHV 291
H H GS L + D N + Q SSSD+ VN ++ G ST + L ++S ++
Sbjct: 238 HHHHHAGSKKLKDEGDHN--NLDQQSSSDAIVNSSEKVSGGSTDKSLRKRKTSASDATDK 295
Query: 292 SEKHSQ-HSTIDSNVNRQVREGSSQRIVSSDQVASTNQHHTSENKA 426
S+ ++ S S+ QV SS + + S H+ ++ A
Sbjct: 296 SDSGTEITSDGKSDKPEQVETRSSSLVFGYLNLFSDGVHNFTDGMA 341
>At5g65170.1 68418.m08197 VQ motif-containing protein contains
PF05678: VQ motif
Length = 362
Score = 31.9 bits (69), Expect = 0.26
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
Frame = +1
Query: 73 TSHQHTQQHKNISESHTHQTIGSTTLS-SKTDQNTSHYTQHSSSDSHVNRQLRGESTQRV 249
+ + H QH+N+ + I + L+ S TDQ + S+ HV+ E +
Sbjct: 224 SEYHHHHQHQNLLLNMNTPNISNPFLNNSLTDQPKPSSLRTSNGFGHVDVGTNFEGLHNI 283
Query: 250 LSSDQSS----TTNQRHVSEKHSQHSTIDSNVNRQVREGSSQRIVSSD 381
+ S SS T N H EK S + D+N+ R + + SD
Sbjct: 284 IVSSSSSMTQPTLNTIHGPEK-STEAENDNNMLRSINGNDQPMVQRSD 330
>At4g32440.2 68417.m04618 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 393
Score = 31.9 bits (69), Expect = 0.26
Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 3/115 (2%)
Frame = +1
Query: 46 TVTSSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQL 225
T+T SD HQ Q H+N H + + L + N S + + + R L
Sbjct: 142 TLTGSD----VHQKLQPHRNSMPLHEPSVVSARLLKRPSPYNWSECAESCTGNPKKMRSL 197
Query: 226 RGESTQR---VLSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQVREGSSQRIVSSD 381
E Q+ +S + + HV + H T + R +G S+ + + D
Sbjct: 198 EKEGQQQKVDAISCRPENRGGKSHVQASLNNHKTGYCQIVRVRSKGFSESVRADD 252
>At4g32440.1 68417.m04617 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 377
Score = 31.9 bits (69), Expect = 0.26
Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 3/115 (2%)
Frame = +1
Query: 46 TVTSSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQL 225
T+T SD HQ Q H+N H + + L + N S + + + R L
Sbjct: 142 TLTGSD----VHQKLQPHRNSMPLHEPSVVSARLLKRPSPYNWSECAESCTGNPKKMRSL 197
Query: 226 RGESTQR---VLSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQVREGSSQRIVSSD 381
E Q+ +S + + HV + H T + R +G S+ + + D
Sbjct: 198 EKEGQQQKVDAISCRPENRGGKSHVQASLNNHKTGYCQIVRVRSKGFSESVRADD 252
>At3g44690.1 68416.m04806 expressed protein
Length = 1176
Score = 31.5 bits (68), Expect = 0.35
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 14/121 (11%)
Frame = +1
Query: 61 DHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQN-------TSHYTQHSSSDSHVNR 219
D T H H Q+ + + I S S+ TSH ++S S +N
Sbjct: 91 DERYTKHYHLQEDSGKRYPESSRFITSHDHPSRLSDEPKPSRFITSHDDEYSPSHGKINV 150
Query: 220 QLRGESTQRVLSSDQSSTTNQRHVS-----EKHSQHSTIDSNVNRQVR--EGSSQRIVSS 378
LR + T+R+ S + + + RH + + S+ S V V + S R+VSS
Sbjct: 151 LLRNDKTKRLESISRECSDSSRHSEDGRERDTYRYESSPLSQVGSSVADFQDESSRLVSS 210
Query: 379 D 381
D
Sbjct: 211 D 211
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 31.1 bits (67), Expect = 0.46
Identities = 37/163 (22%), Positives = 72/163 (44%), Gaps = 19/163 (11%)
Frame = +1
Query: 61 DHGITSHQHTQQHKNISESHTHQTIGST----------TLSSKTDQNTSHYTQHSSSDSH 210
+HG + H Q+ N + S Q +T TL + ++S + S+SDS
Sbjct: 222 NHGNINQNHQQRQLNTTSSQLDQPGFNTNRNNIAFLGQTLPTNVFASSSSPSPRSASDSL 281
Query: 211 VNR-QLRGESTQRVLSSDQSSTTN---QRHVSEKHSQH--STIDSN---VNRQVREGSSQ 363
N L+G+S+ + L ++ ++ N QR +S+ +H + SN + + R ++
Sbjct: 282 QNLWHLQGQSSHQWLLNENNNNNNNILQRGISKNQEEHEMKNVISNGSLFSSEARNNTNN 341
Query: 364 RIVSSDQVASTNQHHTSENKAQRNINSTTYITSGSRVEQNVTS 492
+ Q+AS + + AQ ++ +S S+ +TS
Sbjct: 342 YNQNGGQIASMSATALLQKAAQMGSKRSSSSSSNSKTFGLMTS 384
>At2g24700.1 68415.m02951 transcriptional factor B3 family protein
low similarity to reproductive meristem gene 1 from
[Brassica oleracea var. botrytis] GI:3170424,
[Arabidopsis thaliana] GI:13604227; contains Pfam
profile PF02362: B3 DNA binding domain
Length = 555
Score = 31.1 bits (67), Expect = 0.46
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 169 NTSHYTQHSSSDSHVNRQLRG-ESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQV 345
N S+ T+H S ++ G E+T+ ++ + SEK + +N +
Sbjct: 380 NPSNDTRHGQSLKVTKKEFLGMEATENEFLGEEVYCNDSFKASEKDTL--PFAEPINEDI 437
Query: 346 REGSSQRIVSSDQVASTNQHHTSENK 423
R+G + + + V++ ++ TS+N+
Sbjct: 438 RQGQCSQTIKQEYVSTEEKNSTSQNR 463
>At3g20000.1 68416.m02530 porin family protein low similarity to
haymaker protein [Mus musculus] GI:17834089,
mitochondrial outer membrane protein MOM35 [Mus
musculus] GI:6650562; contains Pfam profile PF01459:
Eukaryotic porin
Length = 309
Score = 30.7 bits (66), Expect = 0.61
Identities = 14/69 (20%), Positives = 34/69 (49%)
Frame = +1
Query: 199 SDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQVREGSSQRIVSS 378
+D +N +L+ + T +++ + TN+ H+S+ + S+ Q++ G S ++ +
Sbjct: 113 TDGRLNARLKADLTDKLVVKANALITNEEHMSQAMFNFDYMGSDYRAQLQLGQS-ALIGA 171
Query: 379 DQVASTNQH 405
+ S H
Sbjct: 172 TYIQSVTNH 180
>At2g46020.2 68415.m05725 transcription regulatory protein SNF2,
putative similar to SP|P22082 Transcription regulatory
protein SNF2 (SWI/SNF complex component SNF2)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 2193
Score = 30.7 bits (66), Expect = 0.61
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 292 SEKHSQHSTIDSNVNRQVREGSSQRI--VSSDQVASTNQHHTSENKAQRNINST 447
S + + +DS+ +RQ + SS R+ V + +VAST++ H S K+ R +N+T
Sbjct: 1814 SYRSKLRTVVDSHSSRQDQSDSSSRLRSVPAKKVASTSKLHVSSPKSGR-LNAT 1866
>At2g46020.1 68415.m05724 transcription regulatory protein SNF2,
putative similar to SP|P22082 Transcription regulatory
protein SNF2 (SWI/SNF complex component SNF2)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 2192
Score = 30.7 bits (66), Expect = 0.61
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 292 SEKHSQHSTIDSNVNRQVREGSSQRI--VSSDQVASTNQHHTSENKAQRNINST 447
S + + +DS+ +RQ + SS R+ V + +VAST++ H S K+ R +N+T
Sbjct: 1813 SYRSKLRTVVDSHSSRQDQSDSSSRLRSVPAKKVASTSKLHVSSPKSGR-LNAT 1865
>At4g18820.1 68417.m02778 expressed protein
Length = 1111
Score = 30.3 bits (65), Expect = 0.80
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 1 NQDTDSNIRHLTSERTVTSSDHGITSHQHTQQHKNISESHTHQT 132
++D+D + E+ H H+H QQH++++E +T +T
Sbjct: 398 DEDSDLASEGRSGEKKHKKKSHVNARHRHRQQHQSLTEKYTPKT 441
>At2g39260.1 68415.m04821 MIF4G domain-containing protein similar to
hUPF2 [Homo sapiens] GI:12232320; contains Pfam profile
PF02854: MIF4G domain
Length = 1186
Score = 30.3 bits (65), Expect = 0.80
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 196 SSDSHVNRQLRGESTQRVLSSDQSSTTNQ-RHVSEKHSQHSTIDSNVNRQVREGSSQRI 369
S + H + + +S+ V+SS+ ST R E H + S DS VR+G ++ +
Sbjct: 902 SIERHSDTKPSNKSSSDVISSNGKSTAKDIRENGEAHGEESDSDSGSGSVVRDGQNEEL 960
>At5g65210.2 68418.m08204 bZIP family transcription factor (TGA1)
identical to transcription factor (TGA1) GI:16550 from
[Arabidopsis thaliana]
Length = 368
Score = 29.9 bits (64), Expect = 1.1
Identities = 26/95 (27%), Positives = 45/95 (47%)
Frame = +1
Query: 229 GESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQVREGSSQRIVSSDQVASTNQHH 408
GES + +S+ +T N H+ ++Q +D+NV+ G++ DQ AST++H
Sbjct: 27 GESFKSNISNGTMNTPN--HIIIPNNQK--LDNNVSEDTSHGTAGTPHMFDQEASTSRH- 81
Query: 409 TSENKAQRNINSTTYITSGSRVEQNVTSAQHLSSR 513
+K QR + SR+ + Q +SR
Sbjct: 82 --PDKIQRRLAQNREAARKSRLRKKAYVQQLETSR 114
>At5g65210.1 68418.m08203 bZIP family transcription factor (TGA1)
identical to transcription factor (TGA1) GI:16550 from
[Arabidopsis thaliana]
Length = 368
Score = 29.9 bits (64), Expect = 1.1
Identities = 26/95 (27%), Positives = 45/95 (47%)
Frame = +1
Query: 229 GESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQVREGSSQRIVSSDQVASTNQHH 408
GES + +S+ +T N H+ ++Q +D+NV+ G++ DQ AST++H
Sbjct: 27 GESFKSNISNGTMNTPN--HIIIPNNQK--LDNNVSEDTSHGTAGTPHMFDQEASTSRH- 81
Query: 409 TSENKAQRNINSTTYITSGSRVEQNVTSAQHLSSR 513
+K QR + SR+ + Q +SR
Sbjct: 82 --PDKIQRRLAQNREAARKSRLRKKAYVQQLETSR 114
>At3g56580.2 68416.m06292 zinc finger (C3HC4-type RING finger)
family protein contains INTERPRO domain, IPR001841, RING
finger
Length = 320
Score = 29.9 bits (64), Expect = 1.1
Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 8/151 (5%)
Frame = +1
Query: 4 QDTDSNIRHLTSERTVTSSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHY 183
+ S H SS + + + TQ+H S+SH L S+ Q H+
Sbjct: 147 EQLSSGTHHRGPPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHH 206
Query: 184 TQHSSS-----DSHVNRQL-RGESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNV--NR 339
HS H + + R E R SS S+ N+ ++S+ I SN+ R
Sbjct: 207 IYHSDCIVPWLVQHNSCPVCRKELPSRGSSSSTQSSQNRSTNGRENSRRRNIFSNLWPFR 266
Query: 340 QVREGSSQRIVSSDQVASTNQHHTSENKAQR 432
S+Q ++ A+ + H ++ Q+
Sbjct: 267 SSSSSSTQNRRDTNNTATAEEGHYHHHQQQQ 297
>At3g56580.1 68416.m06291 zinc finger (C3HC4-type RING finger)
family protein contains INTERPRO domain, IPR001841, RING
finger
Length = 320
Score = 29.9 bits (64), Expect = 1.1
Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 8/151 (5%)
Frame = +1
Query: 4 QDTDSNIRHLTSERTVTSSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHY 183
+ S H SS + + + TQ+H S+SH L S+ Q H+
Sbjct: 147 EQLSSGTHHRGPPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHH 206
Query: 184 TQHSSS-----DSHVNRQL-RGESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNV--NR 339
HS H + + R E R SS S+ N+ ++S+ I SN+ R
Sbjct: 207 IYHSDCIVPWLVQHNSCPVCRKELPSRGSSSSTQSSQNRSTNGRENSRRRNIFSNLWPFR 266
Query: 340 QVREGSSQRIVSSDQVASTNQHHTSENKAQR 432
S+Q ++ A+ + H ++ Q+
Sbjct: 267 SSSSSSTQNRRDTNNTATAEEGHYHHHQQQQ 297
>At3g27700.2 68416.m03459 RNA recognition motif (RRM)-containing
protein contains Pfam profile: PF00076 RNA recognition
motif
Length = 908
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/80 (23%), Positives = 32/80 (40%)
Frame = +1
Query: 40 ERTVTSSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNR 219
E ++ + +H+H ++ + S+S Q S +N HY +S H R
Sbjct: 25 EHEISEEEDDDRNHKHRRKEETRSQS-LEQDSSDQAFSRPYRKNYRHYENGNSFSEHEKR 83
Query: 220 QLRGESTQRVLSSDQSSTTN 279
S QRV +Q +N
Sbjct: 84 SFGTGSGQRVQFDNQRMRSN 103
>At3g27700.1 68416.m03458 RNA recognition motif (RRM)-containing
protein contains Pfam profile: PF00076 RNA recognition
motif
Length = 908
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/80 (23%), Positives = 32/80 (40%)
Frame = +1
Query: 40 ERTVTSSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNR 219
E ++ + +H+H ++ + S+S Q S +N HY +S H R
Sbjct: 25 EHEISEEEDDDRNHKHRRKEETRSQS-LEQDSSDQAFSRPYRKNYRHYENGNSFSEHEKR 83
Query: 220 QLRGESTQRVLSSDQSSTTN 279
S QRV +Q +N
Sbjct: 84 SFGTGSGQRVQFDNQRMRSN 103
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +1
Query: 106 ISESHTHQTIGSTTLSSKTDQNTSHYTQ-HSSSDSHVNR-QLRGESTQRVLSSDQSSTTN 279
I SHT T+ S +S + DQ+ + H + + E V +SD +T +
Sbjct: 1832 IETSHTDNTLSSELVSEQDDQSPKKVEEIHEEEPKEAHDVEATSERNLPVETSDADNTLS 1891
Query: 280 QRHVSEKHSQH 312
+ VSE +H
Sbjct: 1892 SQLVSETKEEH 1902
>At3g58120.1 68416.m06481 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription factor
;supported by cDNA gi|15100054|gb|AF401300.1|AF401300
Length = 329
Score = 29.5 bits (63), Expect = 1.4
Identities = 32/145 (22%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Frame = +1
Query: 97 HKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSS-SDSHVNRQLRGESTQRVLSSDQSST 273
H N H H +I +++ NTS + H+S SD N++ + ++ ++
Sbjct: 101 HNNNHNHHHHHSINGNVGPTRSSSNTSTPSDHNSLSDDDNNKEAPPSDHDHHMDNNVANQ 160
Query: 274 TNQRHVSEKHSQHSTIDSNVNRQVREGSSQRIVSSDQVASTNQHH---------TSENKA 426
N +++ + S + ++G S S +S N+ H + A
Sbjct: 161 NNA--AGNNYNESDEVQSQCKTEPQDGPSANQNSGG--SSGNRIHDPKRVKRILANRQSA 216
Query: 427 QRN-INSTTYITSGSRVEQNVTSAQ 498
QR+ + YI S +E++VTS Q
Sbjct: 217 QRSRVRKLQYI---SELERSVTSLQ 238
>At3g50370.1 68416.m05508 expressed protein
Length = 2179
Score = 29.5 bits (63), Expect = 1.4
Identities = 27/134 (20%), Positives = 52/134 (38%), Gaps = 2/134 (1%)
Frame = +1
Query: 100 KNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRGESTQRVLSSDQSSTTN 279
KN + +I + K + + + S SH + + +D S+ N
Sbjct: 1269 KNANLPPARASIEAAVSPQKQPELSGNSQLPSRKMSHGKSNFAERQSGYQVQTDTSAVRN 1328
Query: 280 QRHVSEKHSQHSTIDSNVNRQVREGSSQRIVSSDQVASTNQHHTSENKAQRN--INSTTY 453
S ++ S +DS NR+ R + V S++++ +AQ + I S Y
Sbjct: 1329 SGLRSSGTAEVSRVDSGGNRRYRRQRVEFRVRESNWPSSDENRNGNGRAQTSTKIGSRKY 1388
Query: 454 ITSGSRVEQNVTSA 495
+ S +Q + S+
Sbjct: 1389 VVSNKSQKQALDSS 1402
>At5g41310.1 68418.m05020 kinesin motor protein-related
Length = 961
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 13 DSNIRHLTSERTVTSSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQH 192
+ +R L S+ +S H + S + + NI + +T+G+TTL+ K+ ++ S + H
Sbjct: 561 NEQVRDLLSQDVPDASMHSVRSTEDVLELMNIGLMN--RTVGATTLNEKSSRSHSVLSVH 618
Query: 193 -SSSDSHVNRQLRG 231
D LRG
Sbjct: 619 VRGVDVKTESVLRG 632
>At3g47460.1 68416.m05161 SMC2-like condensin, putative similar to
SMC2-like condensin (TITAN3) [Arabidopsis thaliana]
GI:14279543; contains Pfam profiles PF02483: SMC family
C-terminal domain, PF02463: RecF/RecN/SMC N terminal
domain
Length = 1171
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +1
Query: 301 HSQHSTIDSNVNRQVREGSSQRIVSSDQVASTNQHHTSENKAQRNINSTTYITSGSRV 474
H HS I V RQ+ G + + + ++A NQ + Q N+N+ ++ R+
Sbjct: 95 HEDHSEI--TVTRQIVVGGKNKYLINGKLAQPNQVQNLFHSVQLNVNNPHFLIMQGRI 150
>At2g02450.2 68415.m00185 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain
Length = 414
Score = 29.1 bits (62), Expect = 1.9
Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 1/121 (0%)
Frame = +1
Query: 67 GITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRG-ESTQ 243
G+ H + + + H H + S+ L+ + Q+ S + HS ++ + N + E
Sbjct: 200 GVEDHPSVPRSLS-TRHHNHNSSTSSRLALRQQQHHSSSSNHSDNNLNNNNNINNLEKLS 258
Query: 244 RVLSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQVREGSSQRIVSSDQVASTNQHHTSENK 423
S D S+TT + S + + N+ R + +S + + ST H +
Sbjct: 259 TEYSGDGSTTTTTTN-SNSDVTIALANQNIYRPMPYDTSNNTL----IVSTRNHQDDDET 313
Query: 424 A 426
A
Sbjct: 314 A 314
>At2g02450.1 68415.m00184 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain
Length = 379
Score = 29.1 bits (62), Expect = 1.9
Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 1/121 (0%)
Frame = +1
Query: 67 GITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRG-ESTQ 243
G+ H + + + H H + S+ L+ + Q+ S + HS ++ + N + E
Sbjct: 200 GVEDHPSVPRSLS-TRHHNHNSSTSSRLALRQQQHHSSSSNHSDNNLNNNNNINNLEKLS 258
Query: 244 RVLSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQVREGSSQRIVSSDQVASTNQHHTSENK 423
S D S+TT + S + + N+ R + +S + + ST H +
Sbjct: 259 TEYSGDGSTTTTTTN-SNSDVTIALANQNIYRPMPYDTSNNTL----IVSTRNHQDDDET 313
Query: 424 A 426
A
Sbjct: 314 A 314
>At1g73850.1 68414.m08550 expressed protein
Length = 575
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +1
Query: 67 GITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSS 201
G ++QHT++ N+ ++H H+ S T H++ + S
Sbjct: 38 GGVNNQHTKEFNNVYQTHEHEEEEEDDQDSNTSSTEEHFSSANVS 82
>At1g10320.1 68414.m01162 U2 snRNP auxiliary factor-related similar to
U2 small nuclear ribonucleoprotein auxiliary factor 35 kD
subunit related protein 1 (sp|Q15695)
Length = 757
Score = 29.1 bits (62), Expect = 1.9
Identities = 28/153 (18%), Positives = 58/153 (37%), Gaps = 8/153 (5%)
Frame = +1
Query: 10 TDSNIRHLTSERTVTSSDHGITSHQHTQQHKNISESHTHQTIGSTTLSS-------KTDQ 168
TDS ++ + H + E H H + + + S + ++
Sbjct: 585 TDSGVQEQMDNEKDRKTHRSSRKHSREGSSADKEEGHEHDRVHTVSDKSHRERSKHRHER 644
Query: 169 NTSHYT-QHSSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQV 345
++S Y+ + S++S ++ + + V +S +++ K Q D + Q
Sbjct: 645 SSSRYSHEEDSTESRHHQHKESDKKRSVETSPVGYQSDKDRDRSKQRQRYKSDDPESDQS 704
Query: 346 REGSSQRIVSSDQVASTNQHHTSENKAQRNINS 444
R+G Q +SD+ + H K +R NS
Sbjct: 705 RKGKRQSEENSDRETHKERRH-RHRKRRRTQNS 736
>At3g54360.1 68416.m06008 expressed protein DNA-binding Mel-18
protein, Homo sapiens, PIR:JN0717
Length = 405
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -1
Query: 489 CDVLLYAAS*CNICCRIYVPLCFVFRSMMLVCGSDL 382
C LLY +S C C ++ +C +CG+D+
Sbjct: 111 CQALLYESSRCVPCTHVFCKVCLTRFKDCPLCGADI 146
>At2g28240.1 68415.m03428 hydroxyproline-rich glycoprotein family
protein
Length = 660
Score = 28.7 bits (61), Expect = 2.5
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 1/122 (0%)
Frame = +1
Query: 148 LSSKTDQNTSHYTQHSSS-DSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTID 324
L K + S Y + S D+ N Q + R L S N + S + + D
Sbjct: 226 LERKMAEARSEYDRKSQEVDAAYNAQAKKNEALRSLVVMNSLLANA-YKSTCPVKSAATD 284
Query: 325 SNVNRQVREGSSQRIVSSDQVASTNQHHTSENKAQRNINSTTYITSGSRVEQNVTSAQHL 504
+ R R SSQ Q TN+H S + ++ + + S + +VT+A+ +
Sbjct: 285 TATVRAPR--SSQHSTQQQQAVQTNRHMNSTAPPRPSVTAAEPMNSAAPPRPSVTAAEPM 342
Query: 505 SS 510
+S
Sbjct: 343 NS 344
>At1g28310.1 68414.m03474 Dof-type zinc finger domain-containing
protein
Length = 311
Score = 28.3 bits (60), Expect = 3.2
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 2/97 (2%)
Frame = +1
Query: 76 SHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRGESTQRVLS 255
SH HT I+ S T++ + L + ++S QH + + G+S + L+
Sbjct: 179 SHDHTINGSFINNSTTNKPFLLSGLFGSSMSSSSTLLQHPHKPMNNGGDMLGQSHLQTLA 238
Query: 256 S--DQSSTTNQRHVSEKHSQHSTIDSNVNRQVREGSS 360
S D N + K + I N+N + SS
Sbjct: 239 SLQDLHVGGNNEDMKYKEGKLDQISGNINGFMSSSSS 275
>At5g45160.1 68418.m05544 root hair defective 3 GTP-binding (RHD3)
family protein contains Pfam profile: PF05879 root hair
defective 3 GTP-binding protein (RHD3) family
Length = 834
Score = 27.9 bits (59), Expect = 4.3
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +1
Query: 220 QLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQVREGSSQRIVSSDQVASTN 399
+ +G++TQ V D S++ R S HS STI +V + SS A
Sbjct: 762 EAQGKTTQEV--PDLSASQTYRQQSPSHSISSTISESVASNISSAGDDAEYSSPSPALVR 819
Query: 400 QHHTS 414
+ +T+
Sbjct: 820 RRNTN 824
>At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1150
Score = 27.9 bits (59), Expect = 4.3
Identities = 18/73 (24%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Frame = +1
Query: 73 TSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHV-NRQLRGESTQRV 249
T Q Q + + S HQ S + + Q Q S H N Q + + Q++
Sbjct: 499 TLSQQQQLQQLLHSSLNHQQQQSQSQQQQQQQQLLQQQQQLQSQQHSNNNQSQSQQQQQL 558
Query: 250 LSSDQSSTTNQRH 288
L Q Q+H
Sbjct: 559 LQQQQQQQLQQQH 571
>At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1164
Score = 27.9 bits (59), Expect = 4.3
Identities = 18/73 (24%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Frame = +1
Query: 73 TSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHV-NRQLRGESTQRV 249
T Q Q + + S HQ S + + Q Q S H N Q + + Q++
Sbjct: 498 TLSQQQQLQQLLHSSLNHQQQQSQSQQQQQQQQLLQQQQQLQSQQHSNNNQSQSQQQQQL 557
Query: 250 LSSDQSSTTNQRH 288
L Q Q+H
Sbjct: 558 LQQQQQQQLQQQH 570
>At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1165
Score = 27.9 bits (59), Expect = 4.3
Identities = 18/73 (24%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Frame = +1
Query: 73 TSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHV-NRQLRGESTQRV 249
T Q Q + + S HQ S + + Q Q S H N Q + + Q++
Sbjct: 499 TLSQQQQLQQLLHSSLNHQQQQSQSQQQQQQQQLLQQQQQLQSQQHSNNNQSQSQQQQQL 558
Query: 250 LSSDQSSTTNQRH 288
L Q Q+H
Sbjct: 559 LQQQQQQQLQQQH 571
>At5g10770.1 68418.m01252 chloroplast nucleoid DNA-binding protein,
putative similar to CND41, chloroplast nucleoid DNA
binding protein [Nicotiana tabacum] GI:2541876; contains
Pfam profile PF00026: Eukaryotic aspartyl protease
Length = 474
Score = 27.9 bits (59), Expect = 4.3
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +1
Query: 187 QHSSSDSH---VNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQVREGS 357
Q +DSH V+ L S+ VLS S+T + HV+ +H S ++ N +
Sbjct: 27 QERETDSHTIQVSSLLPSSSSSCVLSPRASTTKSSLHVTHRHGTCSRLN---NGKATSPD 83
Query: 358 SQRIVSSDQVASTNQHHTSENK 423
I+ DQ A N H+ +K
Sbjct: 84 HVEILRLDQ-ARVNSIHSKLSK 104
>At3g55790.1 68416.m06199 expressed protein predicted protein,
Arabidopsis thaliana; expression supported by MPSS
Length = 103
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 118 HTH-QTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRG 231
H H Q +GSTT++S + N H T + R+LRG
Sbjct: 21 HAHIQVVGSTTVTSVSLANLKHETSSEINFPVWRRELRG 59
>At2g29410.1 68415.m03574 zinc transporter, putative similar to zinc
transporter ZAT [Arabidopsis thaliana]
gi|4206640|gb|AAD11757; similar to zinc transporter
ZnT-2 [Rattus norvegicus] gi|1256378|gb|AAB02775; member
of the cation diffusion facilitator (CDF) family, or
cation efflux (CE) family, PMID:11500563
Length = 375
Score = 27.9 bits (59), Expect = 4.3
Identities = 11/56 (19%), Positives = 23/56 (41%)
Frame = +1
Query: 64 HGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRG 231
H + H H H + + H HQ ++ + ++ + SS +N ++G
Sbjct: 182 HNHSHHHHDHHHHHHNHKHQHQHHHKEVVAEEEEEEMNPLKGEKSSSKEMNINIQG 237
>At1g76780.1 68414.m08935 expressed protein ; expression supported by
MPSS
Length = 1871
Score = 27.9 bits (59), Expect = 4.3
Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Frame = +1
Query: 70 ITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLR--GESTQ 243
I+ H+ + K+ Q G L + ++ + H S + + Q E
Sbjct: 1179 ISDHKEKVKKKDEDYILRSQDTGKVDLGER-ERRSKQRKIHKSVEDEIGDQEDEDAEEAA 1237
Query: 244 RVLSSDQSSTTNQ----RHVSEKHSQHSTIDSNVNRQVREGSSQRIVSSD 381
V+S +++ ++ + SEKH + + I N +V E +R+V +
Sbjct: 1238 AVVSRNENGSSRKVQTIEEESEKHKEQNKIPETSNPEVNEEDEERVVEKE 1287
Score = 27.1 bits (57), Expect = 7.5
Identities = 17/88 (19%), Positives = 36/88 (40%)
Frame = +1
Query: 55 SSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRGE 234
S +H I + Q ++I E + Q +K + + + + H++ ++R E
Sbjct: 1498 SENHNIHEFMDSSQSQDIEEKGSDQA-EKYAKQNKIQEVMND--EDKKEEYHISERVRNE 1554
Query: 235 STQRVLSSDQSSTTNQRHVSEKHSQHST 318
+R+L + + +E Q ST
Sbjct: 1555 MAKRILQVESKANDGSSKKNETEGQEST 1582
>At1g25540.1 68414.m03171 phytochrome and flowering time regulatory
protein (PFT1) PMID: 12815435
Length = 836
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = +1
Query: 82 QHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRGESTQRVLSSD 261
Q QQH+ H HQ + ++ Q TS Q S +N+ + + Q+++
Sbjct: 749 QQQQQHQLTQLQHHHQQQQQASPLNQMQQQTSPLNQMQQQTSPLNQMQQQQQPQQMVMGG 808
Query: 262 QS 267
Q+
Sbjct: 809 QA 810
>At5g66130.1 68418.m08331 cell cycle checkpoint protein-related weak
similarity to cell cycle checkpoint protein RAD17 [Homo
sapiens] GI:4102916
Length = 599
Score = 27.5 bits (58), Expect = 5.7
Identities = 18/78 (23%), Positives = 26/78 (33%)
Frame = +1
Query: 67 GITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRGESTQR 246
G+T H+ I + H H T +SK D+ + + G
Sbjct: 157 GVTVHEWNAPIPTIWQEHVHNTSSGLKYTSKLDEFENFVESTRKYGVMASSSTDGIKAPV 216
Query: 247 VLSSDQSSTTNQRHVSEK 300
VL D N RH E+
Sbjct: 217 VLLIDDLPLANGRHAFER 234
>At5g02930.1 68418.m00236 F-box family protein low similarity to
ribosomal RNA apurinic site specific lyase [Triticum
aestivum] GI:6505722; contains F-box domain Pfam:PF00646
Length = 469
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 86 IRSNIKIFQKVTPIKL*APLLYQVKLIKIPLITLNIL 196
+++ +K FQKV + L LL + L KIP + L +L
Sbjct: 294 VQTMLKTFQKVEKLTLGVNLLQMLSLSKIPSLPLPML 330
>At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 586
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/82 (20%), Positives = 31/82 (37%)
Frame = +1
Query: 109 SESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRGESTQRVLSSDQSSTTNQRH 288
S+ T+ T K D+ ++ T + H++ Q + L+ T+ H
Sbjct: 480 SQGRKTSTVNGNT--DKEDKRSNPTTPEVKNAHHISLQFNNHEAKAFLAKRWKEATSAEH 537
Query: 289 VSEKHSQHSTIDSNVNRQVREG 354
V+ SQ + I N + G
Sbjct: 538 VTLVLSQETDISGNNTHESSNG 559
>At3g25500.1 68416.m03171 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 1051
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +1
Query: 43 RTVTSSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQ 222
R+ +SS + S HK+ S + S +LSS D++ SH S S+++ Q
Sbjct: 460 RSPSSSSSSVCSSPEKASHKSPVTSPKLSSRNSQSLSSSPDRDFSHSLDVSPRISNISPQ 519
Query: 223 L 225
+
Sbjct: 520 I 520
>At1g70740.1 68414.m08154 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 425
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = +1
Query: 67 GITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRGESTQR 246
G + TQ+ + T T GS+T S ++ NT+ T + + R +T+
Sbjct: 349 GSRYRRRTQRPSGAASLGTLSTTGSSTDSFGSNLNTNTGTGVRGTPASSKASTRSNATRS 408
Query: 247 VLSSDQSSTTNQRHVS 294
S S +RH+S
Sbjct: 409 AGQSSSSDPHGKRHMS 424
>At1g05490.1 68414.m00559 C protein immunoglobulin-A-binding beta
antigen-related contains weak similarity to C protein
immunoglobulin-A-binding beta antigen [Streptococcus
agalactiae] gi|18028989|gb|AAL56250
Length = 731
Score = 27.5 bits (58), Expect = 5.7
Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 5/146 (3%)
Frame = +1
Query: 37 SERTVTSSDHGITSHQHT----QQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSD 204
S R V S G S T +++++ +++T + +LSS+ ++S + SSS
Sbjct: 237 SSRIVESISDGEDSSSETDEEEEENQDSEDNNTKDNVTVESLSSEDPSSSSS-SSSSSSS 295
Query: 205 SHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSN-VNRQVREGSSQRIVSSD 381
S + ES + + D + R S + S ++ + R R GSS
Sbjct: 296 SSSSSSSDDESYVKEVVGDNRDDDDLRKASSPIKRVSLVERKALVRYKRSGSSLTKPRER 355
Query: 382 QVASTNQHHTSENKAQRNINSTTYIT 459
+H E K +R +T
Sbjct: 356 DNKIQKLNHREEEKKERQREVVRVVT 381
>At1g04300.1 68414.m00421 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471;contains Pfam PF00917: Meprin And
TRAF-Homology (MATH) domain
Length = 1052
Score = 27.5 bits (58), Expect = 5.7
Identities = 30/152 (19%), Positives = 59/152 (38%), Gaps = 9/152 (5%)
Frame = +1
Query: 55 SSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRGE 234
S+ +GIT + + S + ++ +I S + N+ ++ S + N+Q++
Sbjct: 543 STPNGITEGKSHSTMDDSSSTCSNDSIRSGVTNGSYQGNSLNFRNQKSPNKGKNQQVKAM 602
Query: 235 STQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNVNR---------QVREGSSQRIVSSDQV 387
+ L+S+ + K +S+ SNV Q EGS RI +
Sbjct: 603 TDAHSLASETDDQPSTLGTDPKGQNYSSEASNVGESDWVVVSHIQEPEGSRNRIPVGRER 662
Query: 388 ASTNQHHTSENKAQRNINSTTYITSGSRVEQN 483
+ S + + ST ++S V +N
Sbjct: 663 KTVQSIVNSVDMDRPKEKSTAVLSSPRNVAKN 694
>At5g42630.1 68418.m05189 myb family transcription factor (KAN4)
contains Pfam profile: PF00249 myb-like DNA-binding
domain; identical to cDNA GARP-like putative
transcription factor KANADI4 (KAN4) GI:15723592
Length = 276
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 295 EKHSQHSTIDSNVNRQVREGSSQRIVSSDQVASTNQHHTSENK-AQRNINSTTYITSGS 468
EK ++ D+N N + EG+ +S V T + S K R+I++ Y G+
Sbjct: 174 EKEAEQRIEDNNNNEEADEGTDTNSPNSSSVQKTQRASWSSTKEVSRSISTQAYSHLGT 232
>At2g05642.1 68415.m00603 expressed protein
Length = 394
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +1
Query: 313 STIDSNVNRQVREGSSQRIVSSDQVASTNQHHTSENKAQRNINSTTYITSGSRVEQNVTS 492
S+ ++ + S IVS+ A+TNQ T ++A NS + I + S+ +T
Sbjct: 299 SSFSNSTTSETEPDSDMNIVSTPSNATTNQIDTESSEAANYENSNSSIKT-SKNTSKITK 357
Query: 493 AQHLSSR 513
S R
Sbjct: 358 LTPTSKR 364
>At1g77800.1 68414.m09059 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 1423
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +1
Query: 85 HTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRGESTQRVLS 255
H HK +SE Q TL S TD + + T + N+ L+G T LS
Sbjct: 781 HRYIHKELSELGKEQ-----TLKSSTDSDVARMTTNFDGSEEGNKHLQGAETFLQLS 832
>At1g74480.1 68414.m08628 RWP-RK domain-containing protein contains
Pfam profile: PF02042 RWP-RK domain
Length = 298
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 181 YTQHSSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHS 315
Y+ S +++ NR S ++ + TT +R ++E+H +HS
Sbjct: 72 YSSASWNETEQNRGDGASSEKKRENGTVKETTKKRKINERHREHS 116
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 26.6 bits (56), Expect = 9.9
Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Frame = +1
Query: 1 NQDTDSNIRHLTSERTVT---SSD---HGITSHQHTQQHKNISESHTHQTIGSTTLSSKT 162
+ D + RH +S+ + S D H S +H + + + H H S+ +
Sbjct: 710 SSDNEGEHRHRSSKHSKDVDYSKDKRSHHHRSRKHEKHRDSSDDEHHHHRHRSSRRKHED 769
Query: 163 DQNTSHYTQHSSSDSHVNRQLRGESTQRVLSSDQS 267
+ H +H SS + + + + V SDQS
Sbjct: 770 SSDVEHGHRHKSS-KRIKKDEKTVEEETVSKSDQS 803
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 26.6 bits (56), Expect = 9.9
Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Frame = +1
Query: 1 NQDTDSNIRHLTSERTVT---SSD---HGITSHQHTQQHKNISESHTHQTIGSTTLSSKT 162
+ D + RH +S+ + S D H S +H + + + H H S+ +
Sbjct: 710 SSDNEGEHRHRSSKHSKDVDYSKDKRSHHHRSRKHEKHRDSSDDEHHHHRHRSSRRKHED 769
Query: 163 DQNTSHYTQHSSSDSHVNRQLRGESTQRVLSSDQS 267
+ H +H SS + + + + V SDQS
Sbjct: 770 SSDVEHGHRHKSS-KRIKKDEKTVEEETVSKSDQS 803
>At5g35830.1 68418.m04305 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 282
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 280 QRHVSEKHSQHSTIDSNVNRQVREGSSQRIVSSDQVAST--NQHHTSENKAQRNIN 441
++H+ E H ST +N+N+ IV + + N+HH+ + QRN +
Sbjct: 26 EKHIEESHV--STKMNNLNKSKEPPKGDIIVEVGETCRSCPNKHHSPLHNVQRNFS 79
>At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 930
Score = 26.6 bits (56), Expect = 9.9
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = +1
Query: 154 SKTDQNTSHYTQHSSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNV 333
+K D++ + SSSD H +R +G ++ S + S+ +R +KHS+H
Sbjct: 853 NKKDRHRNDSESDSSSDYH-SRDKQGSRSR---SKRRESSREKRSSHKKHSKH------- 901
Query: 334 NRQVREGSSQRIVSSDQ 384
R+ ++ SS R S ++
Sbjct: 902 -RRTKKSSSSRYSSDEE 917
>At4g08150.1 68417.m01346 homeobox protein knotted-1 like 1 (KNAT1)
identical to homeobox protein knotted-1 like 1 (KNAT1)
SP:P46639 from [Arabidopsis thaliana]
Length = 398
Score = 26.6 bits (56), Expect = 9.9
Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 3/124 (2%)
Frame = +1
Query: 79 HQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSD---SHVNRQLRGESTQRV 249
+QH S + I S+ + T ++ ++SS+ + N Q +
Sbjct: 4 YQHDNSTTPQRVSFLYSPISSSNKNDNTSDTNNNNNNNNSSNYGPGYNNTNNNNHHHQHM 63
Query: 250 LSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQVREGSSQRIVSSDQVASTNQHHTSENKAQ 429
L SS Q + S H ++N N V+ +S ++ + H+T E
Sbjct: 64 LFPHMSSLLPQTTENCFRSDHDQPNNNNNPSVKSEASSSRINHYSMLMRAIHNTQEANNN 123
Query: 430 RNIN 441
N N
Sbjct: 124 NNDN 127
>At3g13065.1 68416.m01632 leucine-rich repeat transmembrane protein
kinase, putative leucine-rich repeat transmembrane
protein kinase 1 GB:AAC27894 from [Zea mays]
Length = 646
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +1
Query: 187 QHSSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQVR 348
++S+ SH +G + + L + QSS Q E+ T+DSN + + +
Sbjct: 262 KNSNDSSHFFDDEKGTNRSKPLFTPQSSQMLQFDNMEEFKNQKTVDSNTSLETK 315
>At2g37150.2 68415.m04558 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 546
Score = 26.6 bits (56), Expect = 9.9
Identities = 20/87 (22%), Positives = 37/87 (42%)
Frame = +1
Query: 31 LTSERTVTSSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSH 210
L + V S + + H + N + + +H G++TLS+ + + + T S SH
Sbjct: 290 LPARSVVNSLSVNTSGYHHHELTGNRNPTVSHGVPGTSTLSTSSSRFSHRSTSTYRSSSH 349
Query: 211 VNRQLRGESTQRVLSSDQSSTTNQRHV 291
+R S+ S + T RH+
Sbjct: 350 GSRSGHVASSSGDRSHLVTETYPSRHL 376
>At2g37150.1 68415.m04557 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 546
Score = 26.6 bits (56), Expect = 9.9
Identities = 20/87 (22%), Positives = 37/87 (42%)
Frame = +1
Query: 31 LTSERTVTSSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSH 210
L + V S + + H + N + + +H G++TLS+ + + + T S SH
Sbjct: 290 LPARSVVNSLSVNTSGYHHHELTGNRNPTVSHGVPGTSTLSTSSSRFSHRSTSTYRSSSH 349
Query: 211 VNRQLRGESTQRVLSSDQSSTTNQRHV 291
+R S+ S + T RH+
Sbjct: 350 GSRSGHVASSSGDRSHLVTETYPSRHL 376
>At1g08440.1 68414.m00933 hypothetical protein contains Pfam profile
PF01027: Uncharacterized protein family UPF0005
Length = 501
Score = 26.6 bits (56), Expect = 9.9
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +1
Query: 112 ESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHV 291
+ H +G S+ DQ+ SH S HV ++ + + + D + V
Sbjct: 424 DDHVVTILGDVDTSNNVDQSQSHGEISVDSCHHVTIKINDDDSIHDKNEDGDIHVHTNRV 483
Query: 292 SEKHSQHS-TIDSNVNR 339
S H+ S +DS V +
Sbjct: 484 SCDHTNASDLLDSGVKK 500
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.300 0.110 0.285
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,631,392
Number of Sequences: 28952
Number of extensions: 213311
Number of successful extensions: 529
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)
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