Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30058
(519 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g51840.1 68416.m05685 short-chain acyl-CoA oxidase identical ... 118 3e-27
At3g45300.1 68416.m04891 isovaleryl-CoA-dehydrogenase (IVD) iden... 102 1e-22
At5g65110.1 68418.m08191 acyl-CoA oxidase (ACX2) identical to ac... 55 2e-08
At4g16760.1 68417.m02531 acyl-CoA oxidase (ACX1) identical to ac... 48 3e-06
At2g35690.1 68415.m04377 acyl-CoA oxidase, putative strong simil... 48 3e-06
At1g06310.1 68414.m00667 acyl-CoA oxidase, putative strong simil... 45 4e-05
At1g06290.1 68414.m00665 acyl-CoA oxidase (ACX3) identical to ac... 44 6e-05
At3g06810.1 68416.m00808 acyl-CoA dehydrogenase-related low simi... 39 0.002
At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger) fa... 29 1.4
At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger) fa... 29 1.4
At1g70440.1 68414.m08104 hypothetical protein 29 1.4
At1g30270.1 68414.m03702 CBL-interacting protein kinase 23 (CIPK... 29 1.9
At2g04030.2 68415.m00372 heat shock protein, putative strong sim... 29 2.5
At2g04030.1 68415.m00371 heat shock protein, putative strong sim... 29 2.5
At1g74820.1 68414.m08668 cupin family protein similar to germin-... 29 2.5
At2g33580.1 68415.m04115 protein kinase family protein / peptido... 28 3.3
At2g26900.1 68415.m03227 bile acid:sodium symporter family prote... 28 3.3
At5g24750.1 68418.m02921 expressed protein 27 5.7
At5g64150.1 68418.m08055 methylase family protein contains TIGRf... 27 7.6
At5g50170.1 68418.m06213 C2 domain-containing protein / GRAM dom... 27 7.6
At4g32700.1 68417.m04655 DNA-directed DNA polymerase family prot... 27 7.6
At3g45130.1 68416.m04871 cycloartenol synthase, putative / 2,3-e... 27 7.6
>At3g51840.1 68416.m05685 short-chain acyl-CoA oxidase identical to
Short-chain acyl CoA oxidase [Arabidopsis thaliana]
GI:5478795; contains InterPro entry IPR006089: Acyl-CoA
dehydrogenase
Length = 436
Score = 118 bits (283), Expect = 3e-27
Identities = 67/170 (39%), Positives = 98/170 (57%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 GCAGVSYVTYGLITRELDGVDSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGEL 181
GC G+S + T E+ VD+S + + V SSL M +I + G+E QK+KYLP +A
Sbjct: 109 GCPGLSITANAIATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNT 168
Query: 182 IGCFGLTEPNFGSDAGGLVTRAKHDAKNKCYVLSGSKTWITNAPIADIIIVWAKD-DAGK 358
+ C+ LTEP+ GSDA GL T A + ++G K WI N+ AD++I++A++ +
Sbjct: 169 VACWALTEPDNGSDASGLGTTATKVEGG--WKINGQKRWIGNSTFADLLIIFARNTTTNQ 226
Query: 359 VRGFIVERAEVKKGLDTPKINGKFSLRASTTGMILLDEVVIPEENLLPNV 508
+ GFIV++ GL KI K LR G ILL V +P+E+ LP V
Sbjct: 227 INGFIVKKD--APGLKATKIPNKIGLRMVQNGDILLQNVFVPDEDRLPGV 274
>At3g45300.1 68416.m04891 isovaleryl-CoA-dehydrogenase (IVD)
identical to isovaleryl-CoA-dehydrogenase precursor
[Arabidopsis thaliana] GI:5596622
Length = 409
Score = 102 bits (245), Expect = 1e-22
Identities = 55/170 (32%), Positives = 92/170 (54%), Gaps = 4/170 (2%)
Frame = +2
Query: 2 GCAGVSYVTYGLITRELDGVDSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGEL 181
G G+ Y+ + + E+ S + S+L + + GT QK+KYLP++ +GE
Sbjct: 88 GGLGLGYLYHCIAMEEISRASGSVALSYGAHSNLCINQLVRNGTAAQKEKYLPKLISGEH 147
Query: 182 IGCFGLTEPNFGSDAGGLVTRAKHDAKNKCYVLSGSKTWITNAPIADIIIVWAKDD--AG 355
+G ++EPN GSD G+ + K + + Y+L+G+K W TN P A+ ++V+AK D AG
Sbjct: 148 VGALAMSEPNAGSDVVGM--KCKAEKVDGGYILNGNKMWCTNGPSAETLVVYAKTDTKAG 205
Query: 356 K--VRGFIVERAEVKKGLDTPKINGKFSLRASTTGMILLDEVVIPEENLL 499
+ FI+E+ G T + K +R S T ++ + +PEEN+L
Sbjct: 206 SKGITAFIIEKG--MTGFSTAQKLDKLGMRGSDTCELVFENCFVPEENIL 253
>At5g65110.1 68418.m08191 acyl-CoA oxidase (ACX2) identical to
acyl-CoA oxidase [Arabidopsis thaliana] GI:3044212
Length = 692
Score = 55.2 bits (127), Expect = 2e-08
Identities = 53/178 (29%), Positives = 74/178 (41%), Gaps = 21/178 (11%)
Frame = +2
Query: 29 YGLITRELDGVDSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEP 208
Y I + VD S M VQ SL GS+ GT+ + KY + + GCF +TE
Sbjct: 129 YFAIMEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYFDGIDNLDYTGCFAMTEL 188
Query: 209 NFGSDAGGLVTRAKHDAKNKCYVL-----SGSKTWITNAPI----ADI---IIVWAKDDA 352
+ GS+ GL T A D +V+ K WI NA + A + +I+ D
Sbjct: 189 HHGSNVQGLQTTATFDPLKDEFVIDTPNDGAIKWWIGNAAVHGKFATVFARLILPTHDSK 248
Query: 353 G----KVRGFIVERAEVK-----KGLDTPKINGKFSLRASTTGMILLDEVVIPEENLL 499
G V FIV ++K G++ K L G + V IP +NLL
Sbjct: 249 GVSDMGVHAFIVPIRDMKTHQTLPGVEIQDCGHKVGLNGVDNGALRFRSVRIPRDNLL 306
>At4g16760.1 68417.m02531 acyl-CoA oxidase (ACX1) identical to
acyl-CoA oxidase [Arabidopsis thaliana] GI:3044214
Length = 675
Score = 48.4 bits (110), Expect = 3e-06
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 20/144 (13%)
Frame = +2
Query: 128 GTEDQKQKYLPRMATGELIGCFGLTEPNFGSDAGGLVTRAKHDAKNKCYVL-----SGSK 292
GTE+Q++K+L ++IGC+ TE GS+ GL T A D K +V+ + SK
Sbjct: 114 GTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHTPTQTASK 173
Query: 293 TW-------ITNAPIADIIIVWAKDDAGKVRGFIVERAEVKKGLDTPKIN--------GK 427
W T+A + +I KD + GFIV+ ++ P I G
Sbjct: 174 WWPGGLGKVSTHAVVYARLITNGKDYG--IHGFIVQLRSLEDHSPLPNITVGDIGTKMGN 231
Query: 428 FSLRASTTGMILLDEVVIPEENLL 499
+ + G ++ D V IP + +L
Sbjct: 232 GAYNSMDNGFLMFDHVRIPRDQML 255
>At2g35690.1 68415.m04377 acyl-CoA oxidase, putative strong
similarity to acyl-CoA oxidase [Arabidopsis thaliana]
GI:3044214
Length = 664
Score = 48.4 bits (110), Expect = 3e-06
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 20/144 (13%)
Frame = +2
Query: 128 GTEDQKQKYLPRMATGELIGCFGLTEPNFGSDAGGLVTRAKHDAKNKCYVL-----SGSK 292
GTE Q+QK+L ++IGC+ TE GS+ GL T A D K +++ + SK
Sbjct: 114 GTEQQQQKWLSLATKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDQFIIHSPTQTSSK 173
Query: 293 TW-------ITNAPIADIIIVWAKDDAGKVRGFIVERAEVK-----KGLDTPKINGKF-- 430
W T+A I +I KD V GFIV+ + G+ I KF
Sbjct: 174 WWPGGLGKVSTHAVIYARLITNGKDHG--VHGFIVQLRSLDDHSPLPGITVGDIGMKFGN 231
Query: 431 -SLRASTTGMILLDEVVIPEENLL 499
+ + G ++ D IP + +L
Sbjct: 232 GAYNSMDNGFLMFDHFRIPRDQML 255
>At1g06310.1 68414.m00667 acyl-CoA oxidase, putative strong
similarity to acyl-CoA oxidase ACX3 GI:8163758 from
[Arabidopsis thaliana]
Length = 675
Score = 44.8 bits (101), Expect = 4e-05
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 15/169 (8%)
Frame = +2
Query: 47 ELDGV-DSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEPNFGSD 223
E+ G+ D S + + V L ++ +GT+ +K+L + GCF +TE G++
Sbjct: 137 EVCGIYDYSLSAKLGVHFLLWGNAVKFFGTKRHHEKWLKDTEDYVVKGCFAMTELGHGTN 196
Query: 224 AGGLVTRAKHDAKNKCYVL-----SGSKTWITNAP--IADIIIVWAKDDAGKVRGFIVER 382
G+ T +D + +V+ S K WI A I++ G +G V
Sbjct: 197 VRGIETVTTYDPTTEEFVINTPCESAQKYWIGEAANHANHAIVISQLSMNGTNQGIHVFI 256
Query: 383 AEVK--KGLDTPKI-----NGKFSLRASTTGMILLDEVVIPEENLLPNV 508
A+++ G P + K L G I D + IP ENLL +V
Sbjct: 257 AQIRDHDGNTCPNVRIADCGHKIGLNGVDNGRIWFDNLRIPRENLLNSV 305
>At1g06290.1 68414.m00665 acyl-CoA oxidase (ACX3) identical to
acyl-CoA oxidase ACX3 [Arabidopsis thaliana] GI:8163758,
GI:8515709
Length = 675
Score = 44.0 bits (99), Expect = 6e-05
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 15/166 (9%)
Frame = +2
Query: 47 ELDGV-DSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEPNFGSD 223
E+ G+ D S + V L ++ +GT+ +K+L + GCF +TE GS+
Sbjct: 137 EVCGIYDHSVSIKVGVHFFLWGNAVKFFGTKRHHEKWLKNTEDYVVKGCFAMTELGHGSN 196
Query: 224 AGGLVTRAKHDAKNKCYVL-----SGSKTWITNAP-IADIIIVWAK-DDAGKVRGFIVER 382
G+ T +D K + +V+ S K WI A A IV+++ G +G
Sbjct: 197 VRGIETVTTYDPKTEEFVINTPCESAQKYWIGGAANHATHTIVFSQLHINGTNQGVHAFI 256
Query: 383 AEVK--KGLDTPKI-----NGKFSLRASTTGMILLDEVVIPEENLL 499
A+++ G P I K L G I D + IP ENLL
Sbjct: 257 AQIRDQDGSICPNIRIADCGHKIGLNGVDNGRIWFDNLRIPRENLL 302
>At3g06810.1 68416.m00808 acyl-CoA dehydrogenase-related low
similarity to acyl-CoA dehydrogenase [Acinetobacter sp.
NCIMB9871] GI:14587418; contains Pfam profiles PF01636:
Phosphotransferase enzyme family, PF00441: Acyl-CoA
dehydrogenase C-terminal domain, PF02770: Acyl-CoA
dehydrogenase middle domain
Length = 824
Score = 38.7 bits (86), Expect = 0.002
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Frame = +2
Query: 107 MGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEPNF-GSDAGGLVTRAKHDAKNKCYVLS 283
M I YG ++Q ++L + G + F +TEP SDA + + + YV++
Sbjct: 527 MEVILRYGNKEQISEWLIPLLEGRIRSGFAMTEPQVASSDATNIECSIRRQGDS--YVIN 584
Query: 284 GSKTWITNA--PIADIIIVWAKDDAGKVRGFIVERAEVKKGLDTPKINGK-----FSLRA 442
G+K W + A P ++I+ K D + +++ + + TP I+ K F
Sbjct: 585 GTKWWTSGAMDPRCRVLILMGKTDFNAPKH--KQQSMILVDMRTPGISVKRPLTVFGFDD 642
Query: 443 STTG--MILLDEVVIPEENLL 499
+ G I + VV+P +N+L
Sbjct: 643 APHGHAEISFENVVVPAKNIL 663
>At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 704
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +2
Query: 83 MSVQSSLAMGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEPNFGSDAG-GLVTRAKHDA 259
+ ++S + S+ YG P ++ + FG TE FGS G + A H
Sbjct: 225 VQTENSASHASLSQYGASSSLSLATPSQSSPNVTNHFGRTEQMFGSGGGRAVAASAFHST 284
Query: 260 KN 265
+N
Sbjct: 285 RN 286
>At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 704
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +2
Query: 83 MSVQSSLAMGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEPNFGSDAG-GLVTRAKHDA 259
+ ++S + S+ YG P ++ + FG TE FGS G + A H
Sbjct: 225 VQTENSASHASLSQYGASSSLSLATPSQSSPNVTNHFGRTEQMFGSGGGRAVAASAFHST 284
Query: 260 KN 265
+N
Sbjct: 285 RN 286
>At1g70440.1 68414.m08104 hypothetical protein
Length = 305
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +2
Query: 134 EDQKQKYLPRMATGELIGCFGLTEPNFGSDAGGLVTRA--KHDAKNKCYVLSGSKTWITN 307
E + Q+ + + GE+I PNF DA L+ A +H+ C+ LSG ++ T
Sbjct: 6 EIEDQESVTNLDNGEIINPISDNAPNFSGDATILLREATFEHNLIKNCF-LSGMGSFATE 64
Query: 308 APIADI 325
I +
Sbjct: 65 TTIVTV 70
>At1g30270.1 68414.m03702 CBL-interacting protein kinase 23 (CIPK23)
identical to CBL-interacting protein kinase 23
[Arabidopsis thaliana] gi|14486386|gb|AAK61494
Length = 482
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 344 DDAGKVRGFIVERAEVKKGLDTPKINGKFSLRASTTGMIL 463
DD+G+ + +VER E +GL TP F L +++ G+ L
Sbjct: 310 DDSGESKNLVVERRE--EGLKTPVTMNAFELISTSQGLNL 347
>At2g04030.2 68415.m00372 heat shock protein, putative strong
similarity to heat shock protein [Arabidopsis thaliana]
GI:1906830; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 777
Score = 28.7 bits (61), Expect = 2.5
Identities = 30/147 (20%), Positives = 60/147 (40%)
Frame = +2
Query: 41 TRELDGVDSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEPNFGS 220
T E G Y++ +S L + S+Y + ++ + + +TEP+
Sbjct: 71 TEEGSGEKFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLG 130
Query: 221 DAGGLVTRAKHDAKNKCYVLSGSKTWITNAPIADIIIVWAKDDAGKVRGFIVERAEVKKG 400
D G L R K D N ++ + +T + D + A+ K + E ++ G
Sbjct: 131 DGGDLEIRIKPDPDNGTITITDTGIGMTKEELIDCLGTIAQSGTSKFLKALKENKDL--G 188
Query: 401 LDTPKINGKFSLRASTTGMILLDEVVI 481
D I G+F + + ++ ++VV+
Sbjct: 189 ADNGLI-GQFGV-GFYSAFLVAEKVVV 213
>At2g04030.1 68415.m00371 heat shock protein, putative strong
similarity to heat shock protein [Arabidopsis thaliana]
GI:1906830; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 780
Score = 28.7 bits (61), Expect = 2.5
Identities = 30/147 (20%), Positives = 60/147 (40%)
Frame = +2
Query: 41 TRELDGVDSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEPNFGS 220
T E G Y++ +S L + S+Y + ++ + + +TEP+
Sbjct: 71 TEEGSGEKFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLG 130
Query: 221 DAGGLVTRAKHDAKNKCYVLSGSKTWITNAPIADIIIVWAKDDAGKVRGFIVERAEVKKG 400
D G L R K D N ++ + +T + D + A+ K + E ++ G
Sbjct: 131 DGGDLEIRIKPDPDNGTITITDTGIGMTKEELIDCLGTIAQSGTSKFLKALKENKDL--G 188
Query: 401 LDTPKINGKFSLRASTTGMILLDEVVI 481
D I G+F + + ++ ++VV+
Sbjct: 189 ADNGLI-GQFGV-GFYSAFLVAEKVVV 213
>At1g74820.1 68414.m08668 cupin family protein similar to
germin-like protein SP|P92995; contains Pfam profile
PF00190: Cupin
Length = 227
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1
Query: 267 LFFASCFALVTNPPASLPKLGSVNPKQ 187
+F A C L TNP SLP L +NP Q
Sbjct: 16 IFLALCITLFTNPTLSLPAL-KLNPFQ 41
>At2g33580.1 68415.m04115 protein kinase family protein /
peptidoglycan-binding LysM domain-containing protein
protein kinase [Arabidopsis thaliana] GI:2852449;
contains Pfam profiles PF01476: LysM domain, PF00069:
Protein kinase domain
Length = 664
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -1
Query: 180 NSPVAMRGKYFCFWSSVPYI*IEPIAKLLCTLIADL 73
N P + R Y FWS PY + IAKLL A++
Sbjct: 53 NGPPSCRS-YLTFWSQPPYNTADSIAKLLNVSAAEI 87
>At2g26900.1 68415.m03227 bile acid:sodium symporter family protein
low similarity to SP|Q12908 Ileal sodium/bile acid
cotransporter {Homo sapiens}; contains Pfam profile
PF01758: Sodium Bile acid symporter family
Length = 409
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 212 NWVPLTQNNQLIHL*PCVVSISVSGLQFRTYKSNPL 105
+WVP T Q P +VS+S SG+ R S P+
Sbjct: 22 SWVPSTTRTQTHLDFPKLVSVSNSGISLRIQNSKPI 57
>At5g24750.1 68418.m02921 expressed protein
Length = 520
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = -1
Query: 192 KQPINSPVAM-RGKYFCFWSSVPY 124
KQP+++ +++ GK FCF VPY
Sbjct: 369 KQPLHAGISIFNGKLFCFSGMVPY 392
>At5g64150.1 68418.m08055 methylase family protein contains TIGRfam
TIGR00536: modification methylase, HemK family
Length = 377
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +2
Query: 50 LDGVDSSYRSAMSVQSSLAMGSIYMYGTEDQKQK--YLPRMATGELIGCF 193
+DG DS + L G +++ T +KQ + M T +L CF
Sbjct: 307 IDGTDSLFHLCHGASRMLQPGGFFVFETNGEKQSKMIVDYMMTSDLKDCF 356
>At5g50170.1 68418.m06213 C2 domain-containing protein / GRAM
domain-containing protein low similarity to SP|P40748
Synaptotagmin III (SytIII) {Rattus norvegicus}; contains
Pfam profiles PF00168: C2 domain, PF02893: GRAM domain
Length = 1027
Score = 27.1 bits (57), Expect = 7.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 484 RYNHFVEQYHSGCRCPQRKFP 422
+YNH+V + G C Q+K P
Sbjct: 913 KYNHYVSVFGGGVTCAQQKSP 933
>At4g32700.1 68417.m04655 DNA-directed DNA polymerase family protein
similar to DNA helicase HEL308 [Homo sapiens]
GI:19110782; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00476: DNA polymerase family A
Length = 1548
Score = 27.1 bits (57), Expect = 7.6
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +2
Query: 278 LSGSKTWITNA---PIADIIIVWAKDDAGKVRGFIVERAEVKKGLDTPKINGKF-SLRAS 445
LS K +T+A +A I+ AKD VR F+ E K TP G F S
Sbjct: 402 LSEDKNGMTHAILEVVAGGIVQTAKDIHRYVRKFLEWNEETKLYTTTPLGRGSFGSSLCP 461
Query: 446 TTGMILLDEVVIPEENLL 499
+I+LD+++ E L+
Sbjct: 462 EESLIVLDDLLRAREGLV 479
>At3g45130.1 68416.m04871 cycloartenol synthase, putative /
2,3-epoxysqualene--cycloartenol cyclase, putative /
(S)-2,3-epoxysqualene mutase, putative 77% similar to
cycloartenol synthase [SP|P38605|gi:452446] [PMID:
7505443]; oxidosqualene cyclase LcOSC2 - Luffa
cylindrica, EMBL:AB033335
Length = 748
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 5 CAGVSYVTYGLITRELDGVDSSYRSAMS 88
C +SYV L+ ELDG D + SA S
Sbjct: 176 CTVLSYVALRLMGEELDGGDGAMESARS 203
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,603,664
Number of Sequences: 28952
Number of extensions: 240150
Number of successful extensions: 613
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 947539968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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