Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30053
         (490 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g39800.1 68417.m05637 inositol-3-phosphate synthase isozyme 1...    27   6.8  
At2g39890.1 68415.m04903 proline transporter 1 (ProT1) identical...    27   6.8  
At3g25490.1 68416.m03169 wall-associated kinase, putative simila...    27   9.0  
At2g22240.2 68415.m02639 inositol-3-phosphate synthase isozyme 2...    27   9.0  
At2g22240.1 68415.m02640 inositol-3-phosphate synthase isozyme 2...    27   9.0  
At1g06780.1 68414.m00721 glycosyl transferase family 8 protein c...    27   9.0  

>At4g39800.1 68417.m05637 inositol-3-phosphate synthase isozyme 1 /
           myo-inositol-1-phosphate synthase 1 / MI-1-P synthase 1
           / IPS 1 identical to SP|P42801 Inositol-3-phosphate
           synthase isozyme 1 (EC 5.5.1.4) (Myo-inositol-1-
           phosphate synthase 1) (MI-1-P synthase 1) (IPS 1)
           {Arabidopsis thaliana}
          Length = 511

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +1

Query: 265 ISRQSPKHRIKHVIQDGRHFPRKTIRNTTVIIW 363
           + + + K ++ H+I+D R F  K   +  V++W
Sbjct: 198 VIKGTKKEQVDHIIKDMREFKEKNKVDKVVVLW 230


>At2g39890.1 68415.m04903 proline transporter 1 (ProT1) identical to
           proline transporter 1 GI:1769901 from [Arabidopsis
           thaliana]
          Length = 442

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -2

Query: 360 YDYSSIPYGFSGKMSAILNHVFNSMLRG 277
           Y+Y    YG  G   AI N +F  M RG
Sbjct: 324 YEYMDTKYGIKGNPFAIKNLLFRIMARG 351


>At3g25490.1 68416.m03169 wall-associated kinase, putative similar
           to wall-associated kinase 4 GB:CAA08793 from
           [Arabidopsis thaliana]
          Length = 433

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = +3

Query: 357 HMVRIYFGKLFFVIVFIDQNVFITFLMLNYKVTRVVIELL 476
           ++V I+F    FVI  I++N ++ ++M+    T  ++ L+
Sbjct: 8   YLVAIFFVVAIFVIACIEENKYLVWIMIILANTTNILSLV 47


>At2g22240.2 68415.m02639 inositol-3-phosphate synthase isozyme 2 /
           myo-inositol-1-phosphate synthase 2 / MI-1-P synthase 2
           / IPS 2 identical to SP|Q38862 Myo-inositol-1-phosphate
           synthase isozyme 2 (EC 5.5.1.4) (MI-1-P synthase 2) (IPS
           2) {Arabidopsis thaliana}
          Length = 380

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +1

Query: 265 ISRQSPKHRIKHVIQDGRHFPRKTIRNTTVIIW 363
           + + + K ++ H+I+D R F  K   +  V++W
Sbjct: 67  VIKGTKKEQVDHIIKDMREFKEKNKVDKLVVLW 99


>At2g22240.1 68415.m02640 inositol-3-phosphate synthase isozyme 2 /
           myo-inositol-1-phosphate synthase 2 / MI-1-P synthase 2
           / IPS 2 identical to SP|Q38862 Myo-inositol-1-phosphate
           synthase isozyme 2 (EC 5.5.1.4) (MI-1-P synthase 2) (IPS
           2) {Arabidopsis thaliana}
          Length = 510

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +1

Query: 265 ISRQSPKHRIKHVIQDGRHFPRKTIRNTTVIIW 363
           + + + K ++ H+I+D R F  K   +  V++W
Sbjct: 197 VIKGTKKEQVDHIIKDMREFKEKNKVDKLVVLW 229


>At1g06780.1 68414.m00721 glycosyl transferase family 8 protein
           contains Pfam profile: PF01501 glycosyl transferase
           family 8
          Length = 589

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 214 VCTDN*ALISTVIGHMIISRQSPKHRIKHVIQDGRHFP 327
           V +DN    S V+   I S + P+  + HV+ D  ++P
Sbjct: 304 VFSDNVLASSVVVNSTISSSKEPERIVFHVVTDSLNYP 341


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,214,373
Number of Sequences: 28952
Number of extensions: 169066
Number of successful extensions: 392
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 392
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 848837888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)