Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30110
(683 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g65160.1 68418.m08195 tetratricopeptide repeat (TPR)-containi... 46 2e-05
At5g03160.1 68418.m00264 DNAJ heat shock N-terminal domain-conta... 46 3e-05
At3g17970.1 68416.m02286 chloroplast outer membrane translocon s... 46 3e-05
At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containi... 43 2e-04
At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containi... 41 7e-04
At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containi... 41 9e-04
At1g04190.1 68414.m00409 tetratricopeptide repeat (TPR)-containi... 40 0.001
At5g10090.1 68418.m01169 tetratricopeptide repeat (TPR)-containi... 40 0.002
At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containi... 35 0.058
At5g09420.1 68418.m01091 chloroplast outer membrane translocon s... 33 0.23
At1g78120.1 68414.m09104 tetratricopeptide repeat (TPR)-containi... 32 0.31
At4g12400.1 68417.m01960 stress-inducible protein, putative simi... 32 0.41
At5g21990.1 68418.m02557 tetratricopeptide repeat (TPR)-containi... 31 0.54
At2g42810.1 68415.m05300 serine/threonine protein phosphatase, p... 31 0.54
At1g56090.1 68414.m06441 tetratricopeptide repeat (TPR)-containi... 31 0.94
At1g32240.1 68414.m03966 myb family transcription factor (KAN2) ... 31 0.94
At1g12270.1 68414.m01419 stress-inducible protein, putative simi... 31 0.94
At5g12430.1 68418.m01461 DNAJ heat shock N-terminal domain-conta... 30 1.2
At3g25230.1 68416.m03152 peptidyl-prolyl cis-trans isomerase / F... 30 1.2
At3g16760.2 68416.m02140 tetratricopeptide repeat (TPR)-containi... 30 1.2
At3g16760.1 68416.m02139 tetratricopeptide repeat (TPR)-containi... 30 1.2
At2g41520.2 68415.m05131 DNAJ heat shock N-terminal domain-conta... 30 1.2
At2g41520.1 68415.m05130 DNAJ heat shock N-terminal domain-conta... 30 1.2
At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase, pu... 30 1.6
At4g30480.2 68417.m04328 tetratricopeptide repeat (TPR)-containi... 30 1.6
At3g07370.1 68416.m00879 tetratricopeptide repeat (TPR)-containi... 30 1.6
At1g58450.1 68414.m06649 peptidyl-prolyl cis-trans isomerase FKB... 29 2.2
At1g56440.1 68414.m06491 serine/threonine protein phosphatase-re... 29 2.2
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 29 2.2
At4g27710.1 68417.m03983 cytochrome P450 family protein contains... 29 2.9
At1g62740.1 68414.m07081 stress-inducible protein, putative simi... 29 2.9
At4g32070.1 68417.m04564 octicosapeptide/Phox/Bem1p (PB1) domain... 29 3.8
At1g18660.4 68414.m02326 zinc finger (C3HC4-type RING finger) fa... 29 3.8
At1g18660.3 68414.m02329 zinc finger (C3HC4-type RING finger) fa... 29 3.8
At1g18660.2 68414.m02328 zinc finger (C3HC4-type RING finger) fa... 29 3.8
At1g18660.1 68414.m02327 zinc finger (C3HC4-type RING finger) fa... 29 3.8
At5g55000.2 68418.m06850 potassium channel tetramerisation domai... 28 5.0
At5g55000.1 68418.m06849 potassium channel tetramerisation domai... 28 5.0
At5g20360.1 68418.m02422 octicosapeptide/Phox/Bem1p (PB1) domain... 28 5.0
At3g04850.1 68416.m00526 tesmin/TSO1-like CXC domain-containing ... 28 5.0
At4g08320.1 68417.m01373 tetratricopeptide repeat (TPR)-containi... 28 6.6
At2g46950.1 68415.m05864 cytochrome P450 family protein similar ... 28 6.6
At2g25290.1 68415.m03025 octicosapeptide/Phox/Bem1p (PB1) domain... 28 6.6
At1g62390.1 68414.m07039 octicosapeptide/Phox/Bem1p (PB1) domain... 28 6.6
At4g32560.2 68417.m04635 paramyosin-related contains weak simila... 27 8.8
At4g32560.1 68417.m04634 paramyosin-related contains weak simila... 27 8.8
At3g14110.2 68416.m01783 tetratricopeptide repeat (TPR)-containi... 27 8.8
At3g14110.1 68416.m01784 tetratricopeptide repeat (TPR)-containi... 27 8.8
At3g11540.2 68416.m01408 gibberellin signal transduction protein... 27 8.8
At3g11540.1 68416.m01407 gibberellin signal transduction protein... 27 8.8
At1g49210.1 68414.m05517 zinc finger (C3HC4-type RING finger) fa... 27 8.8
At1g49200.1 68414.m05516 zinc finger (C3HC4-type RING finger) fa... 27 8.8
At1g33400.1 68414.m04135 tetratricopeptide repeat (TPR)-containi... 27 8.8
>At5g65160.1 68418.m08195 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 593
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +2
Query: 245 GYRA-IYVRGLCLYFEDRDEQAFKHFQQVLRLNPDHKKAVETYKRAKLLKQKKEEGNEAF 421
GY + VR R ++A + Q+ +L+ ++++ + +RA+ + + + +GNE F
Sbjct: 422 GYAGFLVVRAQVHLASGRFDEAVEAIQRAGKLDGNNREVIMISRRAQAVTEARFKGNELF 481
Query: 422 KMGRWQQALALYNEALTIDKNN 487
K GR+Q+A A Y E L D N
Sbjct: 482 KSGRFQEACAAYGEGLDHDPRN 503
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 407 GNEAFKMGRWQQALALYNEALTIDKN 484
GNE +K G + +ALALY+ A+ ID N
Sbjct: 243 GNEDYKNGNFAEALALYDAAIAIDPN 268
Score = 30.7 bits (66), Expect = 0.94
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 597 YVKALLRRAKCYTELGEYEEAVKDYERL 680
Y KA LRRA C ++ ++E AV DYE L
Sbjct: 537 YGKARLRRADCNAKIEKWELAVGDYEIL 564
>At5g03160.1 68418.m00264 DNAJ heat shock N-terminal
domain-containing protein similar to P58 protein, Bos
primigenius taurus, PIR:A56534; similar to p58
(GI:1353270) {Homo sapiens}; contains Pfam PF00226: DnaJ
domain; contains Pfam PF00515: TPR Domain
Length = 482
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/85 (27%), Positives = 43/85 (50%)
Frame = +2
Query: 254 AIYVRGLCLYFEDRDEQAFKHFQQVLRLNPDHKKAVETYKRAKLLKQKKEEGNEAFKMGR 433
A+ +RG Y+ + A +H+Q+ LRL+P+H + + Y K L +K + + G+
Sbjct: 201 ALLLRGRAYYYLADHDIAQRHYQKGLRLDPEHSELKKAYFGLKKLLKKTKSAEDNANKGK 260
Query: 434 WQQALALYNEALTIDKNNRTVNAKL 508
+ + Y EA+ +D + N L
Sbjct: 261 LRVSAEEYKEAIALDPEHTANNVHL 285
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +3
Query: 24 ELRALETLKRLHEDAQRALDANDYRRVVFCMDRC-LDYSPSCTKCKLTKAECLALLGRCQ 200
EL L K E A ++ D + + +D+ L +SP+C+K KL K + L +
Sbjct: 123 ELSQLHQAKSALETASTLYESKDIAKALEFVDKVVLVFSPACSKAKLLKVKLLMVSKDYS 182
Query: 201 EAQEIANDLLRLDSQDTE 254
A +L+ D + E
Sbjct: 183 GAISETGYILKEDENNLE 200
>At3g17970.1 68416.m02286 chloroplast outer membrane translocon
subunit, putative similar to Toc64 [Pisum sativum]
GI:7453538; contains Pfam profile PF00515 TPR Domain
Length = 589
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 290 DRDEQAFKHFQQVLRLNPDHKKAVETYKRAKLLKQKKEEGNEAFKMGRWQQALALYNEAL 469
D + + Q+ + D K + + + + + KE+GN+AFK WQ+A+ LY+EA+
Sbjct: 442 DTVQTMYPSLQEYSSIVTDPKSSKKAITKEESAEIAKEKGNQAFKEKLWQKAIGLYSEAI 501
Query: 470 TIDKNNRT 493
+ NN T
Sbjct: 502 KLSDNNAT 509
>At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 691
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +3
Query: 594 NYVKALLRRAKCYTELGEYEEAVKDYERL 680
+Y+KALLRRA Y +LG +E+AVKDYE L
Sbjct: 524 SYIKALLRRAASYGKLGRWEDAVKDYEFL 552
Score = 35.5 bits (78), Expect = 0.033
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2
Query: 293 RDEQAFKHFQQVLRLNPDHKKAVETYKRAKLLKQKKEEGNEAFKMGRWQQALALYNEALT 472
R E A ++ L+ + + V K++ + + GNE F GR+ +A Y + L
Sbjct: 427 RFENAVVKAERAAMLDQTNPEVVSVLNNVKMVVRARTRGNELFSSGRFSEACVAYGDGLK 486
Query: 473 IDKNN 487
D +N
Sbjct: 487 QDDSN 491
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 353 KAVETYKRAKLLKQKKEEGNEAFKMGRWQQALALYNEALTIDKNN 487
KAV + + ++ K GN+ ++ G + +AL+LY+ A+ I N
Sbjct: 209 KAVRVAENGENPEELKRMGNDMYRRGSFSEALSLYDRAILISPGN 253
>At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q99615 DnaJ homolog
subfamily C member 7 (Tetratricopeptide repeat protein
2) {Homo sapiens}; contains Pfam profile PF00515: TPR
Domain
Length = 721
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/68 (25%), Positives = 38/68 (55%)
Frame = +2
Query: 293 RDEQAFKHFQQVLRLNPDHKKAVETYKRAKLLKQKKEEGNEAFKMGRWQQALALYNEALT 472
R E A ++ +++P + + YK +L+ + ++ GN+ +++ R+ +A + Y E L
Sbjct: 465 RFENAVVTAEKASKIDPQNNEVEILYKNVRLITRARDRGNDLYELERYTEARSAYAEGLK 524
Query: 473 IDKNNRTV 496
D +N T+
Sbjct: 525 YDPSNATL 532
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 594 NYVKALLRRAKCYTELGEYEEAVKDYERL 680
+Y K L+RA YT+L + EAV DYE L
Sbjct: 562 SYTKPRLQRAALYTKLERWAEAVSDYEIL 590
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 389 KQKKEEGNEAFKMGRWQQALALYNEALTIDKNNRTVNA 502
++ K GNE F+ G + +AL LY+ A+ + +N T ++
Sbjct: 259 EEVKRFGNEMFRKGCFAEALKLYDRAIELSPSNATYHS 296
>At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 682
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +3
Query: 594 NYVKALLRRAKCYTELGEYEEAVKDYERL 680
+Y KALLRRA Y +LG +E+AV+DYE L
Sbjct: 515 SYTKALLRRAASYGKLGRWEDAVRDYEVL 543
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +2
Query: 389 KQKKEEGNEAFKMGRWQQALALYNEALTIDKNNRTVNAKLTSTRPPSVRXEHA 547
++ K+ GN ++ G + +ALALY+ A+++ N + + S R E A
Sbjct: 212 EEVKKAGNVMYRKGNYAEALALYDRAISLSPENPAYRSNRAAALAASGRLEEA 264
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 293 RDEQAFKHFQQVLRLNPDHK-KAVETYKRAKLLKQKKEEGNEAFKMGRWQQALALYNEAL 469
R E A ++ + ++ + + V K + + + GNE F GR+ +A Y + L
Sbjct: 417 RFENAIVKVERAMTIDHSNSPEVVSVLNNVKNVAKARTRGNELFSSGRYSEASVAYGDGL 476
Query: 470 TIDKNN 487
+D N
Sbjct: 477 KLDAFN 482
>At1g04190.1 68414.m00409 tetratricopeptide repeat (TPR)-containing
protein low similarity to protein antigen LmSTI1
[Leishmania major] GI:1698880; contains Pfam profile
PF00515 TPR Domain; EST gb|Z47802 and gb|Z48402 come
from this gene
Length = 328
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +2
Query: 350 KKAVETYKRAKLLKQKKEEGNEAFKMGRWQQALALYNEALTIDKNNRTV 496
+KA + + K KE+GNE FK G + +A ALY +A+ +D +N T+
Sbjct: 3 EKAGKATNGGEAEKSLKEKGNEFFKAGNFLKAAALYTQAIKLDPSNATL 51
>At5g10090.1 68418.m01169 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 594
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +2
Query: 302 QAFKHFQQVLRLNPDHKKAVETYKRAKLLKQKKEEGNEAFKMGRWQQALALYNEALTIDK 481
+A + Q+ +L+ ++++ +RA+ + + GN+ FK GR+Q+A Y E L D
Sbjct: 443 EAVEAIQRAGKLDGNNREVSMVLRRAQAVTAARSRGNDFFKAGRFQEACTAYGEGLDHDS 502
Query: 482 NN 487
N
Sbjct: 503 RN 504
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = +3
Query: 597 YVKALLRRAKCYTELGEYEEAVKDYERL 680
Y KA LRRA C +LG +E AV DYE L
Sbjct: 538 YTKARLRRADCNAKLGNWESAVGDYEIL 565
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 407 GNEAFKMGRWQQALALYNEALTID 478
GNE +K G + +ALALY A++ID
Sbjct: 244 GNEDYKNGNFAEALALYEAAISID 267
>At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 883
Score = 34.7 bits (76), Expect = 0.058
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 594 NYVKALLRRAKCYTELGEYEEAVKDYE 674
N ++ L R CY +GEY +AVKDY+
Sbjct: 532 NTIECLYLRGSCYHAVGEYRDAVKDYD 558
>At5g09420.1 68418.m01091 chloroplast outer membrane translocon
subunit, putative similar to component of chloroplast
outer membrane translocon Toc64 [Pisum sativum]
GI:7453538; contains Pfam profiles PF01425: Amidase,
PF00515: TPR Domain
Length = 603
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 398 KEEGNEAFKMGRWQQALALYNEALTIDKNNRT 493
KE+GN A+K +W +A+ Y EA+ ++ N T
Sbjct: 492 KEKGNAAYKGKQWNKAVNFYTEAIKLNGANAT 523
>At1g78120.1 68414.m09104 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q99615 DnaJ homolog
subfamily C member 7 (Tetratricopeptide repeat protein
2) {Homo sapiens}; contains Pfam profile PF00515: TPR
Domain
Length = 530
Score = 32.3 bits (70), Expect = 0.31
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = +2
Query: 293 RDEQAFKHFQQVLRLNPDHKKAVETYKRAKLLKQKKEEGNEAFKMGRWQQALALYNEALT 472
R E A +Q RL+P ++ ++A+ + + GN F +++ A +Y E L
Sbjct: 363 RFEDAVTASRQAARLDPSSEEVNAVARKARAVASARLSGNLLFNASKFEGASVVYTEGLE 422
Query: 473 IDKNNRTVNAKLTSTR 520
D N + ++R
Sbjct: 423 NDPYNALLLCNRAASR 438
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 594 NYVKALLRRAKCYTELGEYEEAVKDYERL 680
+Y KA RRA Y +L +++ A++DYE L
Sbjct: 460 SYRKARRRRADSYAKLEKWQHAIQDYELL 488
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 398 KEEGNEAFKMGRWQQALALYNEALTIDKNNRT 493
K+ GNE + GR+ QAL Y A++ D T
Sbjct: 163 KKMGNEEYCRGRFGQALVFYERAISADPKTPT 194
>At4g12400.1 68417.m01960 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 530
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 594 NYVKALLRRAKCYTELGEYEEAVKDYER 677
N V+A RA CYT+LG E +KD E+
Sbjct: 401 NDVRAYSNRAACYTKLGALPEGLKDAEK 428
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 600 VKALLRRAKCYTELGEYEEAVKDYER 677
+ L RA Y E+G+YEE ++D ++
Sbjct: 264 ISYLTNRAAVYLEMGKYEECIEDCDK 289
>At5g21990.1 68418.m02557 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 554
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 600 VKALLRRAKCYTELGEYEEAVKDYERLY 683
VKAL RR + Y +LG +E+AV D + +
Sbjct: 180 VKALYRRGQAYRDLGLFEDAVSDLSKAH 207
>At2g42810.1 68415.m05300 serine/threonine protein phosphatase,
putative similar to SP|P53042 Serine/threonine protein
phosphatase 5 (EC 3.1.3.16) (PP5) (Protein phosphatase
T) (PPT) {Rattus norvegicus}; contains Pfam profiles
PF00149: Ser/Thr protein phosphatase, PF00515: TPR
Domain
Length = 484
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 398 KEEGNEAFKMGRWQQALALYNEALTIDKNN 487
K + NEAFK ++ A+ LY +A+ ++ NN
Sbjct: 17 KSQANEAFKGHKYSSAIDLYTKAIELNSNN 46
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 251 RAIYVRGLCLYFEDRDEQAFKHFQQVLRLNPDHKKAVETYKRAK--LLKQKKEE 406
+ Y RG + + A K FQQV RL+P+ A K + ++K K EE
Sbjct: 82 KGYYRRGAAYLAMGKFKDALKDFQQVKRLSPNDPDATRKLKECEKAVMKLKFEE 135
>At1g56090.1 68414.m06441 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain;
similar to infertility-related sperm protein [Homo
sapiens] GI:10863768, TPR-containing protein involved in
spermatogenesis TPIS [Mus musculus] GI:6272680
Length = 272
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +2
Query: 395 KKEEGNEAFKMGRWQQALALYNEALTIDK 481
K E+G++ ++ G++++AL Y EALT K
Sbjct: 10 KVEKGHQLYRDGKYKEALLFYTEALTAAK 38
>At1g32240.1 68414.m03966 myb family transcription factor (KAN2)
contains Pfam profile: PF00249 myb-like DNA-binding
domain; identical to cDNA GARP-like putative
transcription factor KANADI2 (KAN2) GI:15723594
Length = 388
Score = 30.7 bits (66), Expect = 0.94
Identities = 14/57 (24%), Positives = 31/57 (54%)
Frame = +2
Query: 329 LRLNPDHKKAVETYKRAKLLKQKKEEGNEAFKMGRWQQALALYNEALTIDKNNRTVN 499
L+++P + K T++R + +E +E +G W++AL +L + ++T+N
Sbjct: 12 LQISPPNSKPSSTWQRRR--STTDQEDHEELDLGFWRRALDSRTSSLVSNSTSKTIN 66
>At1g12270.1 68414.m01419 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 572
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +2
Query: 287 EDRDEQAFKHFQQVLRLNPDHKKAVETYKRAKLLKQKKEEGNEAFKMGRWQQALALYNEA 466
E R+ K R + ++ + Y KL +++E+GN+ FK ++ +A+ Y EA
Sbjct: 352 EHRNPDTLKRLNDAERAKKEWEQ--KQYFDPKLGDEEREKGNDFFKEQKYPEAIKHYTEA 409
Query: 467 LTIDKNN 487
+ + N+
Sbjct: 410 IKRNPND 416
>At5g12430.1 68418.m01461 DNAJ heat shock N-terminal
domain-containing protein similarity to
TETRATRICOPEPTIDE REPEAT PROTEIN 2 , human,
SWISSPROT:TTC2_HUMAN; contains Pfam profiles PF00226:
DnaJ domain, PF00515: TPR Domain
Length = 1165
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 594 NYVKALLRRAKCYTELGEYEEAVKDYER 677
N++K +R A CY LGE E+A + +++
Sbjct: 684 NFLKVQVRAANCYLSLGEIEDASRYFKK 711
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 594 NYVKALLRRAKCYTELGEYEEAVKDYER 677
NY KA+ RRA + + +Y +A D ER
Sbjct: 949 NYSKAISRRATLFEMIRDYGQAASDMER 976
>At3g25230.1 68416.m03152 peptidyl-prolyl cis-trans isomerase /
FK506-binding protein (ROF1) identical to rotamase FKBP
(ROF1) GB:U49453 [Arabidopsis thaliana] (Mol. Gen.
Genet. 252 (5), 510-517 (1996))
Length = 551
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 359 VETYKRAKLLKQKKEEGNEAFKMGRWQQALALYNEAL 469
+ T ++ + +KKEEGN FK G++ A Y +A+
Sbjct: 391 MNTEEKIEAASKKKEEGNSKFKGGKYSLASKRYEKAV 427
>At3g16760.2 68416.m02140 tetratricopeptide repeat (TPR)-containing
protein low similarity to TPR-containing protein
involved in spermatogenesis TPIS [Mus musculus]
GI:6272682; contains Pfam profile PF00515:
tetratricopeptide repeat (TPR) domain
Length = 456
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 603 KALLRRAKCYTELGEYEEAVKD 668
+ L RA CY E+GEY++AV D
Sbjct: 375 EVLSTRASCYKEVGEYKKAVAD 396
>At3g16760.1 68416.m02139 tetratricopeptide repeat (TPR)-containing
protein low similarity to TPR-containing protein
involved in spermatogenesis TPIS [Mus musculus]
GI:6272682; contains Pfam profile PF00515:
tetratricopeptide repeat (TPR) domain
Length = 475
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 603 KALLRRAKCYTELGEYEEAVKD 668
+ L RA CY E+GEY++AV D
Sbjct: 394 EVLSTRASCYKEVGEYKKAVAD 415
>At2g41520.2 68415.m05131 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profiles
PF00226: DnaJ domain, PF00515: TPR Domain
Length = 1077
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 594 NYVKALLRRAKCYTELGEYEEAVKDYERL 680
NY KA+ RRA + + +Y++A D +RL
Sbjct: 871 NYTKAVSRRATLHEMIRDYDQAASDLQRL 899
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 594 NYVKALLRRAKCYTELGEYEEAVKDYER 677
+Y+KA +R A C+ LGE AV+ + +
Sbjct: 629 SYIKAYMRAANCHLVLGELGSAVQYFNK 656
>At2g41520.1 68415.m05130 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profiles
PF00226: DnaJ domain, PF00515: TPR Domain
Length = 1108
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 594 NYVKALLRRAKCYTELGEYEEAVKDYERL 680
NY KA+ RRA + + +Y++A D +RL
Sbjct: 902 NYTKAVSRRATLHEMIRDYDQAASDLQRL 930
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 594 NYVKALLRRAKCYTELGEYEEAVKDYER 677
+Y+KA +R A C+ LGE AV+ + +
Sbjct: 629 SYIKAYMRAANCHLVLGELGSAVQYFNK 656
>At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase,
putative / FK506-binding protein, putative similar to
rof1 [Arabidopsis thaliana] GI:1373396
Length = 578
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 359 VETYKRAKLLKQKKEEGNEAFKMGRWQQALALYNEAL 469
+ T +R + +KKEEGN FK G++ +A Y +
Sbjct: 401 MNTQERIEAAGKKKEEGNVLFKAGKYARASKRYERGV 437
>At4g30480.2 68417.m04328 tetratricopeptide repeat (TPR)-containing
protein similar to SP|Q99614 Tetratricopeptide repeat
protein 1 {Homo sapiens}; contains Pfam profile PF00515:
TPR Domain
Length = 277
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +3
Query: 597 YVKALLRRAKCYTELGEYEEAVKDYERL 680
Y KAL+RRA+ + +L +E+AV D +++
Sbjct: 179 YNKALVRRAEAHEKLEHFEDAVTDLKKI 206
>At3g07370.1 68416.m00879 tetratricopeptide repeat (TPR)-containing
protein / U-box domain-containing protein similar to
serologically defined colon cancer antigen 7 GB:5031963
GI:3170178 [Homo sapiens];
Length = 278
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 383 LLKQKKEEGNEAFKMGRWQQALALYNEALTIDKN 484
+ ++ KE+GN FK R+ A+ Y EA+ + N
Sbjct: 9 MAERLKEDGNNCFKKERFGAAIDAYTEAIALSPN 42
>At1g58450.1 68414.m06649 peptidyl-prolyl cis-trans isomerase
FKBP-type family protein similar to rof1 from
(Arabidopsis thaliana) GI:1373396, GI:1354207; contains
Pfam profile PF00515 TPR Domain
Length = 164
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +2
Query: 371 KRAKLLKQKKEEGNEAFKMGRWQQALALYNEALTIDKNNR 490
++ + +KKEEGN +K ++++A YN+A +N +
Sbjct: 5 EKIEAANRKKEEGNLLYKTQKYERAAKKYNKAAECIENGK 44
>At1g56440.1 68414.m06491 serine/threonine protein
phosphatase-related similar to SP|Q60676
Serine/threonine protein phosphatase 5 (EC 3.1.3.16)
(PP5) (Protein phosphatase T) (PPT) Mus musculus,
Tetratricopeptide Repeats Of Protein Phosphatase 5 [Homo
sapiens] GI:3212250; contains Pfam profile: PF00515: TPR
Domain
Length = 476
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +2
Query: 395 KKEEGNEAFKMGRWQQALALYNEALTIDKN 484
+KE+GNE FK ++ +A+ Y+ ++ + N
Sbjct: 87 EKEQGNEFFKQKKFNEAIDCYSRSIALSPN 116
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 389 KQKKEEGNEAFKMGRWQQALALYNEALTIDKNN 487
++ K GNE ++ G + +AL LY+ A+ + N
Sbjct: 228 EEVKRVGNEMYRKGLFNEALKLYDRAIALSPTN 260
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 594 NYVKALLRRAKCYTELGEYEEAVKDYERL 680
+Y K LLRRA +++ + AV DYE L
Sbjct: 531 SYTKPLLRRAASNSKMERWGAAVSDYEAL 559
>At4g27710.1 68417.m03983 cytochrome P450 family protein contains
Pfam profile: PF00067 cytochrome P450
Length = 518
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 297 SLSSKYKHSPLTYIALYPDYQVVV 226
SLS +YKH+P+ + L+P Y + V
Sbjct: 489 SLSPEYKHTPVDHFDLFPQYGLPV 512
>At1g62740.1 68414.m07081 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 571
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 603 KALLRRAKCYTELGEYEEAVKDYER 677
+A RA CYT+LG E +KD E+
Sbjct: 417 RAYSNRAACYTKLGAMPEGLKDAEK 441
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = +2
Query: 287 EDRDEQAFKHFQQVLRLNPDHKKAVETYKRAKLLKQKKEEGNEAFKMGRWQQALALYNEA 466
E R+ + K + R + ++ + Y + +++E+GN+ FK ++ A+ Y EA
Sbjct: 351 EHRNPETLKRLNEAERAKKELEQ--QEYYDPNIGDEEREKGNDFFKEQKYPDAVRHYTEA 408
Query: 467 L 469
+
Sbjct: 409 I 409
>At4g32070.1 68417.m04564 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein / tetratricopeptide repeat
(TPR)-containing protein similar to SP|Q99614
Tetratricopeptide repeat protein 1 {Homo sapiens};
contains Pfam profiles PF00564: PB1 domain, PF00515: TPR
Domain
Length = 811
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 597 YVKALLRRAKCYTELGEYEEAVKD 668
Y KAL+RR++CY L + + A +D
Sbjct: 124 YSKALVRRSRCYEALNKLDYAFRD 147
>At1g18660.4 68414.m02326 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 491
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/28 (39%), Positives = 22/28 (78%)
Frame = +2
Query: 392 QKKEEGNEAFKMGRWQQALALYNEALTI 475
Q E+GN++FK R+++A++ Y++A +I
Sbjct: 41 QLVEKGNQSFKESRFEEAISSYSKANSI 68
>At1g18660.3 68414.m02329 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/28 (39%), Positives = 22/28 (78%)
Frame = +2
Query: 392 QKKEEGNEAFKMGRWQQALALYNEALTI 475
Q E+GN++FK R+++A++ Y++A +I
Sbjct: 41 QLVEKGNQSFKESRFEEAISSYSKANSI 68
>At1g18660.2 68414.m02328 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/28 (39%), Positives = 22/28 (78%)
Frame = +2
Query: 392 QKKEEGNEAFKMGRWQQALALYNEALTI 475
Q E+GN++FK R+++A++ Y++A +I
Sbjct: 41 QLVEKGNQSFKESRFEEAISSYSKANSI 68
>At1g18660.1 68414.m02327 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/28 (39%), Positives = 22/28 (78%)
Frame = +2
Query: 392 QKKEEGNEAFKMGRWQQALALYNEALTI 475
Q E+GN++FK R+++A++ Y++A +I
Sbjct: 41 QLVEKGNQSFKESRFEEAISSYSKANSI 68
>At5g55000.2 68418.m06850 potassium channel tetramerisation
domain-containing protein / pentapeptide
repeat-containing protein contains Pfam profiles
PF02214: K+ channel tetramerisation domain, PF00805:
Pentapeptide repeats (8 copies)
Length = 298
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 213 SPGLPGSVLATLSIQLLSVYIWCKRGCSLGNGPYRTLHVDN 91
S L G++LA ++Q ++ C GCS RT H+ N
Sbjct: 195 SANLRGALLAGTNLQSANLQDACLVGCSFCGADLRTAHLQN 235
>At5g55000.1 68418.m06849 potassium channel tetramerisation
domain-containing protein / pentapeptide
repeat-containing protein contains Pfam profiles
PF02214: K+ channel tetramerisation domain, PF00805:
Pentapeptide repeats (8 copies)
Length = 290
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 213 SPGLPGSVLATLSIQLLSVYIWCKRGCSLGNGPYRTLHVDN 91
S L G++LA ++Q ++ C GCS RT H+ N
Sbjct: 195 SANLRGALLAGTNLQSANLQDACLVGCSFCGADLRTAHLQN 235
>At5g20360.1 68418.m02422 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein / tetratricopeptide repeat
(TPR)-containing protein contains Pfam profiles PF00564:
PB1 domain, PF00515: TPR Domain
Length = 809
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 603 KALLRRAKCYTELGEYEEAVKD 668
KALL+RA+CY L + + A++D
Sbjct: 201 KALLKRARCYEALNKLDLALRD 222
>At3g04850.1 68416.m00526 tesmin/TSO1-like CXC domain-containing
protein similar to CXC domain containing TSO1-like
protein 1 (SOL1) [Arabidopsis thaliana] GI:7767427, CXC
domain protein TSO1 [Arabidopsis thaliana] GI:7767425;
contains Pfam profile PF03638: Tesmin/TSO1-like CXC
domain
Length = 639
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 126 LDYSPSCTKCKLTKAECLALLGRCQEA 206
LD SC +CK K++CL L C A
Sbjct: 446 LDELGSCKRCKCRKSQCLKLYCECFSA 472
>At4g08320.1 68417.m01373 tetratricopeptide repeat (TPR)-containing
protein glutamine-rich tetratricopeptide repeat (TPR)
containing protein (SGT) - Rattus
norvegicus,PID:e1285298 (SP|O70593); contains Pfam
profile PF00515 TPR Domain
Length = 426
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 335 LNPDHKKAVETYKRAKLLKQKKEEGNEAFKMGRWQQALALYNEALTI-DKN 484
+N K +T+ L + K +GN+A + + +A+ LY+ A+ + DKN
Sbjct: 158 VNEMEKSGCQTFDVNSLAETLKCQGNKAMQSNLYLEAVELYSFAIALTDKN 208
>At2g46950.1 68415.m05864 cytochrome P450 family protein similar to
cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus];
contains Pfam profile: PF00067: Cytochrome P450
Length = 572
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 297 SLSSKYKHSPLTYIALYPDYQVVV 226
+LS+ YKH+P ++ L P Y + V
Sbjct: 542 NLSADYKHAPADHLTLQPQYDLPV 565
>At2g25290.1 68415.m03025 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein / tetratricopeptide repeat
(TPR)-containing protein low similarity to SP|Q99614
Tetratricopeptide repeat protein 1 {Homo sapiens};
contains Pfam profiles PF00564: PB1 domain, PF00515: TPR
Domain
Length = 697
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 597 YVKALLRRAKCYTELGEYEEAVKD 668
+ KALL+RA+CY L + + A +D
Sbjct: 125 FSKALLKRARCYEALNKLDFAFRD 148
>At1g62390.1 68414.m07039 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein / tetratricopeptide repeat
(TPR)-containing protein contains Pfam profiles PF00564:
PB1 domain, PF00515: TPR Domain
Length = 751
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = +3
Query: 597 YVKALLRRAKCYTELGEYEEAVKD 668
+ +ALLRRA+ + +G+++ AV+D
Sbjct: 124 FTRALLRRARAFEAVGKFDLAVQD 147
>At4g32560.2 68417.m04635 paramyosin-related contains weak
similarity to Paramyosin (Swiss-Prot:P10567)
[Caenorhabditis elegans]
Length = 306
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 597 YVKALLRRAKCYTELGEYEEAVKDYERL 680
Y+ A + KCYT L Y+E ERL
Sbjct: 268 YIAAAAEQRKCYTVLRAYQEECTKNERL 295
>At4g32560.1 68417.m04634 paramyosin-related contains weak
similarity to Paramyosin (Swiss-Prot:P10567)
[Caenorhabditis elegans]
Length = 306
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 597 YVKALLRRAKCYTELGEYEEAVKDYERL 680
Y+ A + KCYT L Y+E ERL
Sbjct: 268 YIAAAAEQRKCYTVLRAYQEECTKNERL 295
>At3g14110.2 68416.m01783 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 232
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 621 AKCYTELGEYEEAVKDYE 674
A CYTELG+ E+A K Y+
Sbjct: 206 ADCYTELGDLEKAGKFYD 223
>At3g14110.1 68416.m01784 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 316
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 621 AKCYTELGEYEEAVKDYE 674
A CYTELG+ E+A K Y+
Sbjct: 290 ADCYTELGDLEKAGKFYD 307
>At3g11540.2 68416.m01408 gibberellin signal transduction protein
(SPINDLY) identical to spindly GB:AAC49446 (GI:1589778)
[Arabidopsis thaliana]; contains Pfam profile PF00515
TPR Domain
Length = 732
Score = 27.5 bits (58), Expect = 8.8
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +2
Query: 266 RGLCLYFEDRDEQAFKHFQQVLRLNPDHKKAVETYKRAKLLKQKKEEGNEAFKMGRWQQA 445
+G+CL +++ AF F + +RL+P H T+ +L KEEG +Q+A
Sbjct: 83 KGICLQTQNKGNLAFDCFSEAIRLDP-HNACALTH--CGIL--HKEEGRLVEAAESYQKA 137
Query: 446 L 448
L
Sbjct: 138 L 138
>At3g11540.1 68416.m01407 gibberellin signal transduction protein
(SPINDLY) identical to spindly GB:AAC49446 (GI:1589778)
[Arabidopsis thaliana]; contains Pfam profile PF00515
TPR Domain
Length = 914
Score = 27.5 bits (58), Expect = 8.8
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +2
Query: 266 RGLCLYFEDRDEQAFKHFQQVLRLNPDHKKAVETYKRAKLLKQKKEEGNEAFKMGRWQQA 445
+G+CL +++ AF F + +RL+P H T+ +L KEEG +Q+A
Sbjct: 83 KGICLQTQNKGNLAFDCFSEAIRLDP-HNACALTH--CGIL--HKEEGRLVEAAESYQKA 137
Query: 446 L 448
L
Sbjct: 138 L 138
>At1g49210.1 68414.m05517 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 225
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 105 VFCMDRCLDYSPSCTKCKLTKAE-CLALLGRCQEAQEIAN 221
V C+D+ L + +C KC+ E C +LG +A +A+
Sbjct: 160 VRCIDKWLQHHLTCPKCRHCLVETCQKILGDFSQADSMAS 199
>At1g49200.1 68414.m05516 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 226
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 105 VFCMDRCLDYSPSCTKCKLTKAE-CLALLGRCQEAQEIA 218
V C+D+ L +C KC+ E C +LG +A ++A
Sbjct: 161 VRCIDKWLQQHLTCPKCRHCLVETCQKILGDFSQADQVA 199
>At1g33400.1 68414.m04135 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 798
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 597 YVKALLRRAKCYTELGEYEEAVKD 668
Y KA RR K T LG Y++A +D
Sbjct: 139 YAKAWYRRGKLNTLLGNYKDAFRD 162
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,949,051
Number of Sequences: 28952
Number of extensions: 244912
Number of successful extensions: 850
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1447936096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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