Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30095
(565 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C) 123 7e-29
At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C) 123 7e-29
At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B) 123 7e-29
At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) simila... 122 2e-28
At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) simila... 122 2e-28
At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) simila... 122 2e-28
At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) simila... 84 5e-17
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 30 1.2
At4g38240.2 68417.m05401 alpha-1,3-mannosyl-glycoprotein beta-1,... 29 1.6
At4g38240.1 68417.m05400 alpha-1,3-mannosyl-glycoprotein beta-1,... 29 1.6
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 29 1.6
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 29 2.1
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 29 2.1
At5g23110.1 68418.m02703 zinc finger (C3HC4-type RING finger) fa... 28 3.7
At5g13990.1 68418.m01636 exocyst subunit EXO70 family protein co... 28 5.0
At5g06740.1 68418.m00762 lectin protein kinase family protein co... 27 6.5
At4g13420.1 68417.m02095 potassium transporter (HAK5) identical ... 27 6.5
At3g59970.3 68416.m06695 methylenetetrahydrofolate reductase 1 (... 27 6.5
At1g26540.1 68414.m03234 agenet domain-containing protein contai... 27 6.5
At1g24650.1 68414.m03102 leucine-rich repeat family protein / pr... 27 8.7
>At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C)
Length = 247
Score = 123 bits (297), Expect = 7e-29
Identities = 59/101 (58%), Positives = 71/101 (70%)
Frame = +2
Query: 206 GIPQLKECP*VSIQTWIAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKFK 385
G P LK + + KL+ QRI +T NSIV++ L KH IICVEDLIHEI TVG FK
Sbjct: 142 GYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHEIMTVGPHFK 201
Query: 386 YASNFLWPFKLNNPTGGWRKKTIHYVDGGDFGNREDKINDL 508
A+NFLWPF+L P GG +KK HYV+GGD GNRE+ IN+L
Sbjct: 202 EANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINEL 242
Score = 90.6 bits (215), Expect = 6e-19
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +3
Query: 90 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRG 254
+ +K+LQL RLRQI NGVF+++NKATVNMLR EPY+ +GYPNLKSV+EL+YKRG
Sbjct: 103 KTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVKELIYKRG 157
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +1
Query: 1 QARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 117
+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 73 EAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 111
>At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C)
Length = 242
Score = 123 bits (297), Expect = 7e-29
Identities = 59/101 (58%), Positives = 71/101 (70%)
Frame = +2
Query: 206 GIPQLKECP*VSIQTWIAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKFK 385
G P LK + + KL+ QRI +T NSIV++ L KH IICVEDLIHEI TVG FK
Sbjct: 137 GYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHEIMTVGPHFK 196
Query: 386 YASNFLWPFKLNNPTGGWRKKTIHYVDGGDFGNREDKINDL 508
A+NFLWPF+L P GG +KK HYV+GGD GNRE+ IN+L
Sbjct: 197 EANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINEL 237
Score = 90.6 bits (215), Expect = 6e-19
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +3
Query: 90 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRG 254
+ +K+LQL RLRQI NGVF+++NKATVNMLR EPY+ +GYPNLKSV+EL+YKRG
Sbjct: 98 KTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVKELIYKRG 152
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +1
Query: 1 QARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 117
+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 68 EAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 106
>At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B)
Length = 242
Score = 123 bits (297), Expect = 7e-29
Identities = 59/101 (58%), Positives = 70/101 (69%)
Frame = +2
Query: 206 GIPQLKECP*VSIQTWIAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKFK 385
G P LK + + KL+ QRI +T NSIVE+ L KH IIC EDLIHEI TVG FK
Sbjct: 137 GFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHEILTVGPHFK 196
Query: 386 YASNFLWPFKLNNPTGGWRKKTIHYVDGGDFGNREDKINDL 508
A+NFLWPF+L P GG +KK HYV+GGD GNRE+ IN+L
Sbjct: 197 EANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINEL 237
Score = 87.8 bits (208), Expect = 4e-18
Identities = 37/55 (67%), Positives = 49/55 (89%)
Frame = +3
Query: 90 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRG 254
+ +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+ +G+PNLKSV+EL+YKRG
Sbjct: 98 KTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVTYGFPNLKSVKELIYKRG 152
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +1
Query: 1 QARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 117
+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 68 EAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 106
>At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 122 bits (293), Expect = 2e-28
Identities = 58/101 (57%), Positives = 70/101 (69%)
Frame = +2
Query: 206 GIPQLKECP*VSIQTWIAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKFK 385
G P LK + + KL+ QR +T NSIV++ L KH IICVEDLIHEI TVG FK
Sbjct: 139 GYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFK 198
Query: 386 YASNFLWPFKLNNPTGGWRKKTIHYVDGGDFGNREDKINDL 508
A+NFLWPF+L P GG +KK HYV+GGD GNRE+ IN+L
Sbjct: 199 EANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINEL 239
Score = 90.2 bits (214), Expect = 8e-19
Identities = 38/55 (69%), Positives = 49/55 (89%)
Frame = +3
Query: 90 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRG 254
+ +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+ +GYPNLKSV+EL+YKRG
Sbjct: 100 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRG 154
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +1
Query: 1 QARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 117
+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 70 EAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 108
>At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 122 bits (293), Expect = 2e-28
Identities = 58/101 (57%), Positives = 70/101 (69%)
Frame = +2
Query: 206 GIPQLKECP*VSIQTWIAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKFK 385
G P LK + + KL+ QR +T NSIV++ L KH IICVEDLIHEI TVG FK
Sbjct: 139 GYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFK 198
Query: 386 YASNFLWPFKLNNPTGGWRKKTIHYVDGGDFGNREDKINDL 508
A+NFLWPF+L P GG +KK HYV+GGD GNRE+ IN+L
Sbjct: 199 EANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINEL 239
Score = 90.2 bits (214), Expect = 8e-19
Identities = 38/55 (69%), Positives = 49/55 (89%)
Frame = +3
Query: 90 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRG 254
+ +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+ +GYPNLKSV+EL+YKRG
Sbjct: 100 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRG 154
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +1
Query: 1 QARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 117
+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 70 EAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 108
>At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 122 bits (293), Expect = 2e-28
Identities = 58/101 (57%), Positives = 70/101 (69%)
Frame = +2
Query: 206 GIPQLKECP*VSIQTWIAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKFK 385
G P LK + + KL+ QR +T NSIV++ L KH IICVEDLIHEI TVG FK
Sbjct: 139 GYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFK 198
Query: 386 YASNFLWPFKLNNPTGGWRKKTIHYVDGGDFGNREDKINDL 508
A+NFLWPF+L P GG +KK HYV+GGD GNRE+ IN+L
Sbjct: 199 EANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINEL 239
Score = 90.2 bits (214), Expect = 8e-19
Identities = 38/55 (69%), Positives = 49/55 (89%)
Frame = +3
Query: 90 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRG 254
+ +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+ +GYPNLKSV+EL+YKRG
Sbjct: 100 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRG 154
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +1
Query: 1 QARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 117
+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 70 EAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 108
>At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) similar
to ribosomal protein L7 GB:AAA03081 GI:307388 from [Homo
sapiens]
Length = 247
Score = 84.2 bits (199), Expect = 5e-17
Identities = 40/84 (47%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Frame = +2
Query: 263 LSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKFKYASNFLWPFKLNNPTGG-- 436
+ G +P+T N+I+E+ L +H I+ +EDL++EI VG+ F+ FL P KLN P
Sbjct: 160 IEGNPVPLTDNNIIEQALGEHKILGIEDLVNEIARVGDHFREVMRFLGPLKLNKPVADVL 219
Query: 437 WRKKTIHYVDGGDFGNREDKINDL 508
RKK + + +GGD GNREDKINDL
Sbjct: 220 HRKKQV-FSEGGDTGNREDKINDL 242
Score = 50.8 bits (116), Expect = 6e-07
Identities = 19/55 (34%), Positives = 35/55 (63%)
Frame = +3
Query: 90 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRG 254
+ +++L +L+ + GVF + + L +PY+ +GYPN KSV++L+YK+G
Sbjct: 102 KTKRILNNLQLKSVFTGVFAKATDSLFQKLLKVQPYVTYGYPNDKSVKDLIYKKG 156
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 31 PGEAKLAFVIRIRGINQVSPKSVKFCNCL 117
P ++ L F+IRI+G N + PK+ + N L
Sbjct: 82 PVKSDLVFIIRIQGKNDMHPKTKRILNNL 110
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 WD-40
repeats (PF00400) (2 weak)
Length = 1108
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 414 LKGHRKLLAYLNFSPTVKISWMRSSTQIMLCLWSLFSTMLLEVIGIRCPLSLA 256
LKGH+K + L FS + I + S +C WS+ + + + I+ P A
Sbjct: 900 LKGHQKRITGLAFSTALNI-LVSSGADAQICFWSIDTWEKRKSVAIQMPAGKA 951
>At4g38240.2 68417.m05401 alpha-1,3-mannosyl-glycoprotein
beta-1,2-N-acetylglucosaminyltransferase, putative
similar to N-acetylglucosaminyltransferase I from
Arabidopsis thaliana [gi:5139335]; contains AT-AC
non-consensus splice sites at intron 13
Length = 444
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 383 KYASNFLWPFKLNNPTGGWRKKTIHYVDGGDF 478
++ S +L P KLN+ T W+ K + Y+ G++
Sbjct: 321 QFFSQYLEPIKLNDVTVDWKAKDLGYLTEGNY 352
>At4g38240.1 68417.m05400 alpha-1,3-mannosyl-glycoprotein
beta-1,2-N-acetylglucosaminyltransferase, putative
similar to N-acetylglucosaminyltransferase I from
Arabidopsis thaliana [gi:5139335]; contains AT-AC
non-consensus splice sites at intron 13
Length = 444
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 383 KYASNFLWPFKLNNPTGGWRKKTIHYVDGGDF 478
++ S +L P KLN+ T W+ K + Y+ G++
Sbjct: 321 QFFSQYLEPIKLNDVTVDWKAKDLGYLTEGNY 352
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2
Query: 444 LRQPPVGLFNLKGHRKLLAYLNFSPTVKISWMRSSTQIMLCLWSL 310
LR P + L + GH K ++Y+ F + + + SST L LW L
Sbjct: 690 LRNPKIPLCTMIGHSKTVSYVKFVDSSTL--VSSSTDNTLKLWDL 732
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2
Query: 444 LRQPPVGLFNLKGHRKLLAYLNFSPTVKISWMRSSTQIMLCLWSL 310
LR P + L + GH K ++Y+ F + + + SST L LW L
Sbjct: 648 LRNPKLPLCTMIGHHKTVSYVRFVDSSTL--VSSSTDNTLKLWDL 690
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2
Query: 444 LRQPPVGLFNLKGHRKLLAYLNFSPTVKISWMRSSTQIMLCLWSL 310
LR P + L + GH K ++Y+ F + + + SST L LW L
Sbjct: 648 LRNPKLPLCTMIGHHKTVSYVRFVDSSTL--VSSSTDNTLKLWDL 690
>At5g23110.1 68418.m02703 zinc finger (C3HC4-type RING finger) family
protein contains Pfam profile: PF00097 zinc finger, C3HC4
type (RING finger)
Length = 4706
Score = 28.3 bits (60), Expect = 3.7
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = -1
Query: 496 LVFAVTKVSPVDIMNGLLAPTTSWIVQFEGPQEITRVLELFSNSEDLMDEVLNTDNVVFM 317
LV A ++ + + LA W+ G ++LEL N+E L+D+VL + + M
Sbjct: 1108 LVSASMRILDGECSSTALAYNLGWLSHPGGSAIAAQLLELGKNNEILIDQVLRQELALAM 1167
Query: 316 E---PLLNNAVGSD 284
+L +GSD
Sbjct: 1168 PKIYSILARLLGSD 1181
>At5g13990.1 68418.m01636 exocyst subunit EXO70 family protein
contains Pfam domain PF03081: Exo70 exocyst complex
subunit;
Length = 695
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 439 PTTSWIVQFEGPQEITRVLELFSNSEDLMDEVLNTDNVV-FMEPLLNNA 296
P T W ++ P+E++ +LE LM +LNT + + E L+N+A
Sbjct: 136 PKTVW---YQDPEEVSSLLEAVDRVSKLMGLLLNTKSCLDHHESLINHA 181
>At5g06740.1 68418.m00762 lectin protein kinase family protein
contains Legume lectins beta-chain signature,
PROSITE:PS00307 and Serine/Threonine protein kinases
active-site signature, PROSITE:PS00108
Length = 652
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 45 IGICHPNPWYQPSFTEVRKVL 107
+ CHPNP +PS V KVL
Sbjct: 586 LACCHPNPNQRPSMKTVLKVL 606
>At4g13420.1 68417.m02095 potassium transporter (HAK5) identical to
K+ transporter HAK5 [Arabidopsis thaliana]
gi|7108597|gb|AAF36490; similar to high-affinity
potassium transporter AtKUP1p [Arabidopsis thaliana]
gi|2688979|gb|AAB88901; KUP/HAK/KT Transporter family
member, PMID:11500563
Length = 785
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 455 HYVDGGDFGNREDKINDLSGGWFK 526
H +DG + N E+K+N+ W K
Sbjct: 6 HQIDGDEVNNHENKLNEKKKSWGK 29
>At3g59970.3 68416.m06695 methylenetetrahydrofolate reductase 1
(MTHFR1) identical to methylenetetrahydrofolate
reductase MTHFR1 [Arabidopsis thaliana] GI:5911425
Length = 592
Score = 27.5 bits (58), Expect = 6.5
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 45 IGICHPNPWYQPSFTEVRKVLQLFRLRQINNGVFVRLN-KATVNMLRIAEPYIAWGYP 215
IG +PW + + + +L +IN+ F+ +N + +VN + P I WG P
Sbjct: 403 IGNLKSSPWSELDGLQPETKIINEQLGKINSNGFLTINSQPSVNAAKSDSPAIGWGGP 460
>At1g26540.1 68414.m03234 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 695
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 122 QSKQLQNFTDF-GETWLIPRIRMTNANLASPGT 27
+ KQL+ + G TW+ P I +N ++ SPGT
Sbjct: 126 ERKQLRTHLIWTGGTWIQPEIEESNKSMFSPGT 158
>At1g24650.1 68414.m03102 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 886
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 350 IHEIFTVGEKFKYASNFLWPFKLNNPTGGW 439
++ + ++ E F Y NF +K N+P GW
Sbjct: 327 VNTLLSIVEAFGYPVNFAEKWKGNDPCSGW 356
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,373,199
Number of Sequences: 28952
Number of extensions: 294451
Number of successful extensions: 828
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1082538160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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