Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_H06
         (438 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g02590.1 68416.m00250 delta 7-sterol-C5-desaturase, putative ...    29   1.8  
At3g02580.1 68416.m00249 delta 7-sterol-C5-desaturase (STE1) ide...    28   2.4  
At3g27870.1 68416.m03475 haloacid dehalogenase-like hydrolase fa...    26   9.7  
At2g38840.1 68415.m04772 guanylate-binding family protein simila...    26   9.7  
At1g70300.1 68414.m08088 potassium transporter, putative similar...    26   9.7  

>At3g02590.1 68416.m00250 delta 7-sterol-C5-desaturase, putative
           similar to delta7 sterol C-5 desaturase GI:5031219 from
           [Arabidopsis thaliana]
          Length = 279

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +1

Query: 37  NRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYY 180
           NR  L +++  + W   P+F+ T++  +     LYF    +W  + YY
Sbjct: 20  NRMVLSHLLPVNLWEPLPHFLQTWLRNYLAGNILYFISGFLWCFYIYY 67


>At3g02580.1 68416.m00249 delta 7-sterol-C5-desaturase (STE1)
           identical to sterol-C5-desaturase GB:AAD12944 GI:4234768
           from [Arabidopsis thaliana]
          Length = 281

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +1

Query: 37  NRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYY 180
           NR  L +++  + W   P+F+ T++  +     LYF    +W  + YY
Sbjct: 19  NRIVLSHLLPANLWEPLPHFLQTWLRNYLAGTLLYFISGFLWCFYIYY 66


>At3g27870.1 68416.m03475 haloacid dehalogenase-like hydrolase family
            protein similar to Potential phospholipid-transporting
            ATPase (EC 3.6.3.1) from {Mus musculus} SP|P98200, Homo
            sapiens SP|O43520, {Arabidopsis thaliana} SP|P98204;
            contains InterPro accession IPR005834: Haloacid
            dehalogenase-like hydrolase
          Length = 1174

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +1

Query: 73   CWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWV 252
            C+RR    I+  I  F+   +L F FT  WY     F+ K    ++++   N+ +TS  V
Sbjct: 900  CYRR----ITLMICYFFYK-NLAFGFTLFWYEAYASFSGKPAYNDWYMSCYNVFFTSLPV 954

Query: 253  IRI 261
            I +
Sbjct: 955  IAL 957


>At2g38840.1 68415.m04772 guanylate-binding family protein similar
           to SP|Q01514 Interferon-induced guanylate-binding
           protein 1 (Guanine nucleotide-binding protein 1)
           (Interferon-gamma inducible protein MAG-1) {Mus
           musculus}; contains Pfam profile PF02263:
           Guanylate-binding protein, N-terminal domain
          Length = 679

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +1

Query: 94  FISTFILIFWTS*SLYFNFTRIWY 165
           F+ T+  +FWT+ +LY+N   +W+
Sbjct: 593 FLETYTRMFWTAEALYYN--PVWH 614


>At1g70300.1 68414.m08088 potassium transporter, putative similar to
           potassium transporter HAK2p [Mesembryanthemum
           crystallinum] gi|14091471|gb|AAK53759; KUP/HAK/KT
           Transporter family member, PMID:11500563; contains Pfam
           profile PF02705: K+ potassium transporter
          Length = 782

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 73  CWRRRPNFISTFILIFWTS*SLYFNFTRI 159
           CW +   F   F++ F T  SLYF+ + I
Sbjct: 448 CWHKSVIFAIVFVVFFGTIESLYFSASLI 476


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,769,394
Number of Sequences: 28952
Number of extensions: 105075
Number of successful extensions: 219
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 692941200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)