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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b11r
         (551 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g23410.1 68414.m02932 ubiquitin extension protein, putative /...   208   1e-54
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ...   206   6e-54
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ...   206   8e-54
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677   137   4e-33
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92...   137   4e-33
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92...   137   4e-33
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence...   137   4e-33
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence...   137   4e-33
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence...   137   4e-33
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence...   137   4e-33
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence...   137   4e-33
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3...   137   4e-33
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1...   137   4e-33
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1...   137   4e-33
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1...   137   4e-33
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ...   137   4e-33
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ...   137   4e-33
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER...   137   4e-33
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly...   137   4e-33
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER...   137   4e-33
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly...   136   9e-33
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu...   136   1e-32
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu...   130   8e-31
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ...   113   1e-25
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha...    85   3e-17
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER...    66   1e-11
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER...    65   3e-11
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi...    61   4e-10
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi...    55   4e-08
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER...    53   1e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit...    52   2e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER...    50   8e-07
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ...    50   1e-06
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ...    50   1e-06
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER...    48   3e-06
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi...    48   3e-06
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi...    48   3e-06
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi...    48   3e-06
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi...    48   3e-06
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER...    48   6e-06
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER...    47   7e-06
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER...    47   1e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1...    46   2e-05
At4g01000.1 68417.m00135 ubiquitin family protein low similarity...    45   3e-05
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa...    44   5e-05
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa...    44   5e-05
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER...    44   7e-05
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ...    44   7e-05
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti...    44   9e-05
At2g30100.1 68415.m03663 ubiquitin family protein low similarity...    43   2e-04
At5g16090.1 68418.m01880 ubiquitin family protein contains INTER...    41   5e-04
At3g06455.1 68416.m00747 splicing factor-related contains weak s...    40   8e-04
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER...    40   0.001
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa...    40   0.001
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER...    40   0.001
At1g53980.1 68414.m06149 polyubiquitin-related contains similari...    40   0.001
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER...    39   0.003
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER...    37   0.008
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER...    37   0.008
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER...    35   0.042
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa...    34   0.055
At1g11970.1 68414.m01383 hypothetical protein                          33   0.096
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER...    33   0.13 
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-...    31   0.39 
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER...    31   0.39 
At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal...    30   1.2  
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER...    30   1.2  
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp...    30   1.2  
At5g12280.1 68418.m01444 hypothetical protein                          29   1.6  
At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal...    29   2.1  
At1g47680.1 68414.m05297 hypothetical protein                          29   2.1  
At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal...    28   4.8  
At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming] beta-...    27   6.3  
At1g78020.1 68414.m09092 senescence-associated protein-related s...    27   8.3  

>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
           40S ribosomal protein S27A (RPS27aA) strong similarity
           to ubiquitin extension protein (UBQ5) GB:AAA32906
           GI:166934 from (Arabidopsis thaliana)
          Length = 156

 Score =  208 bits (509), Expect = 1e-54
 Identities = 104/155 (67%), Positives = 115/155 (74%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 329 IQKESTLHLVXXXXXXXXXXXXKNYSTPXXXXXXXXXXKLAVLRFYKVDENGKIHRLRRE 150
           IQKESTLHLV            K Y+ P          KLAVL+FYKVD +GK+ RL++E
Sbjct: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKE 120

Query: 149 CTGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDDDK 45
           C    CG G FMA   DRHYCGKC +T VFK  D+
Sbjct: 121 CPSVSCGPGTFMASHFDRHYCGKCGTTYVFKKADE 155


>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
           ribosomal protein S27A (RPS27aB) identical to GI:166936
          Length = 157

 Score =  206 bits (504), Expect = 6e-54
 Identities = 103/153 (67%), Positives = 114/153 (74%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 329 IQKESTLHLVXXXXXXXXXXXXKNYSTPXXXXXXXXXXKLAVLRFYKVDENGKIHRLRRE 150
           IQKESTLHLV            K Y+ P          KLAVL+FYKVD +GK+ RLR+E
Sbjct: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKE 120

Query: 149 CTGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDD 51
           C    CGAG FMA   DRHYCGKC  T V++ +
Sbjct: 121 CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKE 153


>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
           ribosomal protein S27A (RPS27aC) identical to GI:166933,
           GI:166934
          Length = 157

 Score =  206 bits (503), Expect = 8e-54
 Identities = 102/153 (66%), Positives = 114/153 (74%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 329 IQKESTLHLVXXXXXXXXXXXXKNYSTPXXXXXXXXXXKLAVLRFYKVDENGKIHRLRRE 150
           IQKESTLHLV            K Y+ P          KLAVL+FYK+D +GK+ RLR+E
Sbjct: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKE 120

Query: 149 CTGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDD 51
           C    CGAG FMA   DRHYCGKC  T V++ +
Sbjct: 121 CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKE 153


>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
          Length = 382

 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 61  IQKESTLHLV 70



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374


>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
           GI:928809
          Length = 306

 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 61  IQKESTLHLV 70



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298


>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
           GI:928809
          Length = 306

 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 61  IQKESTLHLV 70



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298


>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
           senescence-associated protein; identical to GI:870791
          Length = 312

 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 61  IQKESTLHLV 70



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222



 Score = 66.5 bits (155), Expect = 1e-11
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 408
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262



 Score = 31.5 bits (68), Expect = 0.39
 Identities = 22/49 (44%), Positives = 26/49 (53%)
 Frame = -2

Query: 430 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 284
           K K + K   L  +   S LESS +MDV   TT SRR+   TW   FVV
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 303


>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
           senescence-associated protein; identical to GI:870791
          Length = 464

 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 61  IQKESTLHLV 70



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374



 Score = 66.5 bits (155), Expect = 1e-11
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 408
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414



 Score = 31.5 bits (68), Expect = 0.39
 Identities = 22/49 (44%), Positives = 26/49 (53%)
 Frame = -2

Query: 430 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 284
           K K + K   L  +   S LESS +MDV   TT SRR+   TW   FVV
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 455


>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
           senescence-associated protein; identical to GI:870791
          Length = 388

 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 61  IQKESTLHLV 70



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298



 Score = 66.5 bits (155), Expect = 1e-11
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 408
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338



 Score = 31.5 bits (68), Expect = 0.39
 Identities = 22/49 (44%), Positives = 26/49 (53%)
 Frame = -2

Query: 430 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 284
           K K + K   L  +   S LESS +MDV   TT SRR+   TW   FVV
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 379


>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
           senescence-associated protein; identical to GI:870791
          Length = 464

 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 61  IQKESTLHLV 70



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374



 Score = 66.5 bits (155), Expect = 1e-11
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 408
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414



 Score = 31.5 bits (68), Expect = 0.39
 Identities = 22/49 (44%), Positives = 26/49 (53%)
 Frame = -2

Query: 430 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 284
           K K + K   L  +   S LESS +MDV   TT SRR+   TW   FVV
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 455


>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
           senescence-associated protein; identical to GI:870791
          Length = 388

 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 61  IQKESTLHLV 70



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298



 Score = 66.5 bits (155), Expect = 1e-11
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 408
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338



 Score = 31.5 bits (68), Expect = 0.39
 Identities = 22/49 (44%), Positives = 26/49 (53%)
 Frame = -2

Query: 430 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 284
           K K + K   L  +   S LESS +MDV   TT SRR+   TW   FVV
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 379


>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
           GI:304117
          Length = 229

 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 61  IQKESTLHLV 70



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222


>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
           GI:166795; similar to N. sylvestris hexameric
           polyubiquitin, GenBank accession number M74101
          Length = 305

 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 61  IQKESTLHLV 70



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298


>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
           GI:166795; similar to N. sylvestris hexameric
           polyubiquitin, GenBank accession number M74101
          Length = 229

 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 61  IQKESTLHLV 70



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222


>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
           GI:166795; similar to N. sylvestris hexameric
           polyubiquitin, GenBank accession number M74101
          Length = 305

 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 61  IQKESTLHLV 70



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222



 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298


>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
           ribosomal protein L40 (RPL40B) identical to GI:166929,
           GI:166930
          Length = 128

 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 61  IQKESTLHLV 70


>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
           ribosomal protein L40 (RPL40A) identical to GI:166930,
           GI:166931
          Length = 128

 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 61  IQKESTLHLV 70


>At2g35635.1 68415.m04370 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 154

 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 61  IQKESTLHLV 70



 Score = 91.9 bits (218), Expect = 3e-19
 Identities = 41/68 (60%), Positives = 54/68 (79%)
 Frame = -1

Query: 503 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 324
           I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T  DY I+
Sbjct: 79  IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIE 138

Query: 323 KESTLHLV 300
             S LHLV
Sbjct: 139 GGSVLHLV 146


>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
           polyubiquitin GI:248337 from [Zea mays]
          Length = 294

 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 61  IQKESTLHLV 70



 Score =  134 bits (324), Expect = 4e-32
 Identities = 65/70 (92%), Positives = 68/70 (97%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE IPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 212 IQKESTLHLV 221



 Score =  130 bits (314), Expect = 6e-31
 Identities = 65/70 (92%), Positives = 68/70 (97%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+D N
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 136 IQKESTLHLV 145



 Score = 99.1 bits (236), Expect = 2e-21
 Identities = 48/53 (90%), Positives = 50/53 (94%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG 351
           MQIFVKTLTGKTITLEVE S TI+NVKAKIQDKEGIPP+QQRLIFAGKQLE G
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280


>At1g31340.1 68414.m03835 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 156

 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 61  IQKESTLHLV 70



 Score = 95.1 bits (226), Expect = 3e-20
 Identities = 42/68 (61%), Positives = 55/68 (80%)
 Frame = -1

Query: 503 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 324
           I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+
Sbjct: 79  IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138

Query: 323 KESTLHLV 300
             S LHLV
Sbjct: 139 GGSVLHLV 146


>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
           polyubiquitin (ubq12) gene sequence GI:304121 from
           [Arabidopsis thaliana]
          Length = 230

 Score =  136 bits (329), Expect = 9e-33
 Identities = 65/70 (92%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+N+KAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146



 Score =  131 bits (317), Expect = 3e-31
 Identities = 64/70 (91%), Positives = 67/70 (95%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI P+QQRLIFAGKQ EDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYN 212

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222



 Score =  122 bits (293), Expect = 2e-28
 Identities = 57/70 (81%), Positives = 65/70 (92%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIF+KTLTGKT  LEVE SDTI+NVKAKIQD EGIPP+Q RLIFAGKQLEDGRTL+DYN
Sbjct: 1   MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60

Query: 329 IQKESTLHLV 300
           +Q++STLHL+
Sbjct: 61  VQEDSTLHLL 70


>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
           polyubiquitin (ubq9) gene sequence GI:304120 from
           [Arabidopsis thaliana]
          Length = 322

 Score =  136 bits (328), Expect = 1e-32
 Identities = 64/70 (91%), Positives = 69/70 (98%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEG+PP+QQRLIFAGKQL+DGRTL+DYN
Sbjct: 79  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 139 IQKESTLHLV 148



 Score =  129 bits (311), Expect = 1e-30
 Identities = 62/70 (88%), Positives = 66/70 (94%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFV+TLT KTI LEVE SDT +NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 215 IQKESTLHLV 224



 Score =  120 bits (289), Expect = 6e-28
 Identities = 61/71 (85%), Positives = 65/71 (91%), Gaps = 1/71 (1%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG-RTLSDY 333
           MQIFV TLTGKTITLEVE SDTI+NVKAKIQDKE I P+QQRLIFAG+QLEDG  TL+DY
Sbjct: 231 MQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADY 290

Query: 332 NIQKESTLHLV 300
           NIQKESTLHLV
Sbjct: 291 NIQKESTLHLV 301



 Score =  105 bits (251), Expect = 3e-23
 Identities = 51/71 (71%), Positives = 60/71 (84%)
 Frame = -1

Query: 515 VKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSD 336
           + MQI  KTLT KTIT++V  SDTI NVKAKIQD EGIP +QQRLIF+GK L+DGRTL+D
Sbjct: 1   MSMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLAD 60

Query: 335 YNIQKESTLHL 303
           Y+IQK+S LHL
Sbjct: 61  YSIQKDSILHL 71


>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
           polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
           thaliana] (Genetics 139 (2), 921-939 (1995))
          Length = 631

 Score =  130 bits (313), Expect = 8e-31
 Identities = 63/70 (90%), Positives = 67/70 (95%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFV+TLTGKTITLEV+ SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYN
Sbjct: 79  MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 139 IQKESTLHLV 148



 Score =  117 bits (282), Expect = 5e-27
 Identities = 57/70 (81%), Positives = 64/70 (91%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           +QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP +QQRLIFAGKQLEDG TL+DYN
Sbjct: 3   IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62

Query: 329 IQKESTLHLV 300
           IQKESTLHLV
Sbjct: 63  IQKESTLHLV 72



 Score =  107 bits (257), Expect = 5e-24
 Identities = 54/75 (72%), Positives = 62/75 (82%)
 Frame = -1

Query: 524 VRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 345
           ++R  MQIF+KTLTGKTI LEVE SDTI NVK KIQ KEGI P+QQ LIF G+QLEDG T
Sbjct: 547 LQRGGMQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVT 606

Query: 344 LSDYNIQKESTLHLV 300
           L DY+I K+STL+LV
Sbjct: 607 LGDYDIHKKSTLYLV 621



 Score =  107 bits (256), Expect = 6e-24
 Identities = 56/75 (74%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
 Frame = -1

Query: 518 RVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI--PPNQQRLIFAGKQLEDGRT 345
           R  MQIFVKTLT K I LEVE  DTIENVKA +QDKEGI   PN QRLIF GK+L+DG T
Sbjct: 316 RCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCT 375

Query: 344 LSDYNIQKESTLHLV 300
           L+DY+IQKESTLHLV
Sbjct: 376 LADYSIQKESTLHLV 390



 Score =  101 bits (243), Expect = 2e-22
 Identities = 50/69 (72%), Positives = 56/69 (81%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           MQIFVK   GK ITLEV  SDTI++VKAKIQDK G PP+QQ L+F G QL+DGRTL DYN
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452

Query: 329 IQKESTLHL 303
           I+ ESTLHL
Sbjct: 453 IRNESTLHL 461



 Score = 92.7 bits (220), Expect = 1e-19
 Identities = 51/78 (65%), Positives = 57/78 (73%), Gaps = 5/78 (6%)
 Frame = -1

Query: 518 RVKMQIFVKTL-----TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 354
           R  M IFVK L     TG+   LEVE SDTI+NVKAK+QDKE IP +  RLIFAGK LE 
Sbjct: 235 RGDMYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEG 294

Query: 353 GRTLSDYNIQKESTLHLV 300
           GRTL+ YNIQK STL+LV
Sbjct: 295 GRTLAHYNIQKGSTLYLV 312



 Score = 89.0 bits (211), Expect = 2e-18
 Identities = 48/76 (63%), Positives = 58/76 (76%), Gaps = 7/76 (9%)
 Frame = -1

Query: 509 MQIFVKTLTGK-----TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQL--EDG 351
           MQIFV T +GK     T+TL+VE SDTIENVKAKIQD+EG+ P+ QRLIF G++L  ED 
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214

Query: 350 RTLSDYNIQKESTLHL 303
           RTL+DY I+  STL L
Sbjct: 215 RTLADYGIRNRSTLCL 230



 Score = 88.6 bits (210), Expect = 2e-18
 Identities = 49/75 (65%), Positives = 54/75 (72%), Gaps = 7/75 (9%)
 Frame = -1

Query: 509 MQIFVKTL-------TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG 351
           MQIFVKT        T KTITLEVE SDTI+NVK KIQ K GIP ++QRLIF G+ L   
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528

Query: 350 RTLSDYNIQKESTLH 306
           RTL DYNIQK ST+H
Sbjct: 529 RTLLDYNIQKGSTIH 543


>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
           profile: PF00240 ubiquitin family
          Length = 158

 Score =  113 bits (271), Expect = 1e-25
 Identities = 54/78 (69%), Positives = 62/78 (79%)
 Frame = -1

Query: 533 GDSVRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 354
           G   R   M IF+KTLTG+ I LEVE  DTIEN+KAKIQDK+GIP +QQRLIF GKQLED
Sbjct: 78  GPDFRHEVMFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLED 137

Query: 353 GRTLSDYNIQKESTLHLV 300
           G TL+DYNIQ +S LHL+
Sbjct: 138 GLTLADYNIQNDSILHLI 155


>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
           A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
           from [Arabidopsis thaliana]
          Length = 78

 Score = 85.0 bits (201), Expect = 3e-17
 Identities = 38/70 (54%), Positives = 52/70 (74%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP  QR+++ GKQL D  T   YN
Sbjct: 1   MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60

Query: 329 IQKESTLHLV 300
           +++ S LHLV
Sbjct: 61  LERGSVLHLV 70


>At1g53950.1 68414.m06145 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 216

 Score = 66.5 bits (155), Expect = 1e-11
 Identities = 31/48 (64%), Positives = 38/48 (79%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 366
           M IF+KTLTG+T T EV+ SDTI  +KAK ++KEGIP  QQRLIF G+
Sbjct: 50  MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGR 97



 Score = 64.5 bits (150), Expect = 4e-11
 Identities = 32/69 (46%), Positives = 47/69 (68%)
 Frame = -1

Query: 515 VKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSD 336
           V M+IFV T+  KT  LEV+ SDTI+ +K+ I D+ G P +QQ L   G +L++  T+SD
Sbjct: 139 VLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISD 198

Query: 335 YNIQKESTL 309
           YNI+ ++ L
Sbjct: 199 YNIKPDANL 207



 Score = 28.3 bits (60), Expect = 3.6
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVK 429
           M I +KTL GK I LEVE S    ++K
Sbjct: 1   MHISIKTLEGKRIKLEVEDSSNTIDLK 27


>At5g42220.1 68418.m05139 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 879

 Score = 64.9 bits (151), Expect = 3e-11
 Identities = 28/70 (40%), Positives = 46/70 (65%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           +++ +KTL  +T T +V  ++T+   K KI  + G+P  QQRLIF G+ L+D   LS+Y+
Sbjct: 24  LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83

Query: 329 IQKESTLHLV 300
           ++   TLHL+
Sbjct: 84  LENGHTLHLI 93


>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
           to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
           {Saccharomyces cerevisiae}; contains Pfam profiles
           PF00240: Ubiquitin family, PF00632: HECT-domain
           (ubiquitin-transferase)
          Length = 873

 Score = 61.3 bits (142), Expect = 4e-10
 Identities = 29/72 (40%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
 Frame = -1

Query: 512 KMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSD 336
           ++QIFV+ ++G KTI +  E  DT+E +  +I+ K  IP  +QR+I+ GKQL+   +L+ 
Sbjct: 94  RLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTY 153

Query: 335 YNIQKESTLHLV 300
           Y+I+++++L LV
Sbjct: 154 YSIEQDASLQLV 165


>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
           to DNA repair by nucleotide excision (NER) RAD23
           protein, isoform I GI:1914683 from [Daucus carota]
          Length = 378

 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSD 336
           M+IFVKTL+G    +EV+P+D + +VK  I+  +G   P  +Q LI  GK L+D  TL +
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60

Query: 335 YNIQKES 315
            N+ + S
Sbjct: 61  NNVVENS 67


>At2g17190.1 68415.m01985 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 538

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 24/72 (33%), Positives = 40/72 (55%)
 Frame = -1

Query: 515 VKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSD 336
           V + + V+   G   ++      T+E+ K  I     +P NQQRLI+ G+ L+D +TL  
Sbjct: 16  VAVAVNVRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLS 75

Query: 335 YNIQKESTLHLV 300
           Y +Q + T+H+V
Sbjct: 76  YGLQADHTVHMV 87


>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
           to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
           GI:9937505; contains Pfam profiles PF00240: Ubiquitin
           family, PF00627: UBA/TS-N domain
          Length = 551

 Score = 52.4 bits (120), Expect = 2e-07
 Identities = 21/66 (31%), Positives = 38/66 (57%)
 Frame = -1

Query: 497 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 318
           ++   G   +++     T+E+ K  +     +P NQQRLI+ G+ L+D +TL  Y +Q +
Sbjct: 22  IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81

Query: 317 STLHLV 300
            T+H+V
Sbjct: 82  HTIHMV 87


>At4g02970.1 68417.m00404 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 270

 Score = 50.4 bits (115), Expect = 8e-07
 Identities = 25/69 (36%), Positives = 40/69 (57%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           M +++ T TG + ++ ++  +T+  +K KI+  +GIP ++Q L   GK LED     DY 
Sbjct: 1   MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60

Query: 329 IQKESTLHL 303
           I  ES L L
Sbjct: 61  ILFESRLLL 69


>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
           profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
           domain;
          Length = 299

 Score = 49.6 bits (113), Expect = 1e-06
 Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 339
           M+IFVKTL G    +EV+P D++ +VK  I+  +G    P  +Q LI  GK L+D  T+ 
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 338 DYNIQKES 315
           +  + + S
Sbjct: 61  ENKVAENS 68


>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
           profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
           domain;
          Length = 419

 Score = 49.6 bits (113), Expect = 1e-06
 Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 339
           M+IFVKTL G    +EV+P D++ +VK  I+  +G    P  +Q LI  GK L+D  T+ 
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 338 DYNIQKES 315
           +  + + S
Sbjct: 61  ENKVAENS 68


>At3g13235.1 68416.m01666 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 414

 Score = 48.4 bits (110), Expect = 3e-06
 Identities = 22/70 (31%), Positives = 43/70 (61%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           M+I V T   + ITL+V+  +T+ENVKA ++ +  +P  QQ+L++ G ++ +   LS   
Sbjct: 1   MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60

Query: 329 IQKESTLHLV 300
           ++ +  L ++
Sbjct: 61  VKDDDLLMMM 70


>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
           to DNA repair by nucleotide excision (NER) RAD23
           protein, isoform II GI:1914685 from [Daucus carota];
           contains Pfam profiles PF00240: Ubiquitin family,
           PF00627: UBA/TS-N domain
          Length = 351

 Score = 48.4 bits (110), Expect = 3e-06
 Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 339
           M++ VKTL G    + V PSDTI  VK  I+D +G    P  QQ LI  GK L+D  +L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 338 DYNIQKESTL 309
           +  + +E  L
Sbjct: 61  ENKVTEEGFL 70


>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
           to DNA repair by nucleotide excision (NER) RAD23
           protein, isoform II GI:1914685 from [Daucus carota];
           contains Pfam profiles PF00240: Ubiquitin family,
           PF00627: UBA/TS-N domain
          Length = 365

 Score = 48.4 bits (110), Expect = 3e-06
 Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 339
           M++ VKTL G    + V PSDTI  VK  I+D +G    P  QQ LI  GK L+D  +L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 338 DYNIQKESTL 309
           +  + +E  L
Sbjct: 61  ENKVTEEGFL 70


>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
           to DNA repair by nucleotide excision (NER) RAD23
           protein, isoform II GI:1914685 from [Daucus carota];
           contains Pfam profiles PF00240: Ubiquitin family,
           PF00627: UBA/TS-N domain
          Length = 371

 Score = 48.4 bits (110), Expect = 3e-06
 Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 339
           M++ VKTL G    + V PSDTI  VK  I+D +G    P  QQ LI  GK L+D  +L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 338 DYNIQKESTL 309
           +  + +E  L
Sbjct: 61  ENKVTEEGFL 70


>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
           to DNA repair by nucleotide excision (NER) RAD23
           protein, isoform II GI:1914685 from [Daucus carota]
          Length = 368

 Score = 48.4 bits (110), Expect = 3e-06
 Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPNQQRLIFAGKQLEDGRTLS 339
           M++ VKTL G    + V P+DTI  VK  I+D   K+  P  QQ LI  GK L+D  TL 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 338 DYNIQKESTL 309
           +  + +E  L
Sbjct: 61  ENKVTEEGFL 70


>At4g03350.1 68417.m00457 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 263

 Score = 47.6 bits (108), Expect = 6e-06
 Identities = 24/67 (35%), Positives = 38/67 (56%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           M + + T TG + ++ ++  +T+  +K KI+  +GIP ++Q L   GK LED     DY 
Sbjct: 1   MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60

Query: 329 IQKESTL 309
           I  ES L
Sbjct: 61  ILFESLL 67


>At5g11080.1 68418.m01294 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 352

 Score = 47.2 bits (107), Expect = 7e-06
 Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDY 333
           ++I +K L   T TL VE +  + ++K  I    G+ P +Q RL+F G+ L++ + LSDY
Sbjct: 11  IRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDY 70

Query: 332 NIQKESTLHLV 300
           ++++  TL+LV
Sbjct: 71  HVEEGHTLYLV 81


>At4g03370.1 68417.m00459 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 295

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 22/69 (31%), Positives = 41/69 (59%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           M++ V+  +G T ++++   DT+   K KI+  + IP ++Q + F GK LED   + +++
Sbjct: 1   MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60

Query: 329 IQKESTLHL 303
           I +   LHL
Sbjct: 61  ILQNPLLHL 69


>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
           [Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
           Pfam domains, PF00439: Bromodomain and PF00240:
           Ubiquitin family
          Length = 1919

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
 Frame = -1

Query: 518 RVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTL 342
           R  M+I VK+L GK   L V   +++ +++AK   K      +  ++ + GK+L+D ++L
Sbjct: 658 RGSMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSL 717

Query: 341 SDYNIQKESTLHLV 300
           +  N+Q  S +HL+
Sbjct: 718 AAQNVQPNSLVHLI 731


>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
           SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
           profile PF00240: Ubiquitin family
          Length = 415

 Score = 45.2 bits (102), Expect = 3e-05
 Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 333
           +Q FV+ L GK++TL    P    E +K +I ++  IP + QRLI  G Q+ DG  +S  
Sbjct: 9   LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS-- 66

Query: 332 NIQKESTLHLV 300
             Q ++T++LV
Sbjct: 67  --QPDATVNLV 75


>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
           family protein / ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 566

 Score = 44.4 bits (100), Expect = 5e-05
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
 Frame = -1

Query: 497 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYNIQ 324
           VKT  GK     VE    I  VK +I  K G  + P++Q +++ G++LED   ++D    
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174

Query: 323 KESTLHLV 300
            +S LHL+
Sbjct: 175 DDSVLHLL 182


>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
           family protein / ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 566

 Score = 44.4 bits (100), Expect = 5e-05
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
 Frame = -1

Query: 497 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYNIQ 324
           VKT  GK     VE    I  VK +I  K G  + P++Q +++ G++LED   ++D    
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174

Query: 323 KESTLHLV 300
            +S LHL+
Sbjct: 175 DDSVLHLL 182


>At4g05230.1 68417.m00789 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 206

 Score = 44.0 bits (99), Expect = 7e-05
 Identities = 22/69 (31%), Positives = 37/69 (53%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           M +F +T +G T  +E+   DT+  +K KI+  + IP ++Q L+F G  L+D   +    
Sbjct: 1   MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60

Query: 329 IQKESTLHL 303
           I   S + L
Sbjct: 61  ILNHSRIQL 69


>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
           bromodomain-containing protein low similarity to
           SP|P51123 Transcription initiation factor TFIID 230 kDa
           subunit {Drosophila melanogaster}; contains Pfam
           profiles: PF00439 bromodomain, PF00240: Ubiquitin family
          Length = 1700

 Score = 44.0 bits (99), Expect = 7e-05
 Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
 Frame = -1

Query: 527 SVRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDG 351
           +++   M+I +  L GK   L V   +++ ++KAK   K      +  ++ + GK+LED 
Sbjct: 494 AIKLQTMKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDE 553

Query: 350 RTLSDYNIQKESTLHLV 300
           ++L++ N+Q  S +HL+
Sbjct: 554 KSLAEQNVQPNSLVHLL 570


>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
           SP:P42740 from [Aglaothamnion neglectum]
          Length = 79

 Score = 43.6 bits (98), Expect = 9e-05
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK---QLEDGRTLS 339
           MQ+F+    GK   +EVE + TI ++K KI D  G+    Q L   GK   ++  G T+ 
Sbjct: 1   MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60

Query: 338 DYNIQKESTLHL 303
           DY I+     H+
Sbjct: 61  DYKIKACDIFHM 72


>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
           SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
           (Ras-binding protein Sur-8) {Homo sapiens}; contains
           Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
           repeat, PF00560: Leucine Rich Repeat
          Length = 897

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 21/61 (34%), Positives = 36/61 (59%)
 Frame = -1

Query: 482 GKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 303
           GK+I L V P  T++++K+++Q    + P  Q+LIF GK L +  TL   ++   + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603

Query: 302 V 300
           +
Sbjct: 604 M 604


>At5g16090.1 68418.m01880 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 142

 Score = 41.1 bits (92), Expect = 5e-04
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 339
           M+I VKTL G    +EV+P+D++  VK  I+   G    P  QQ LI   ++L D  T+ 
Sbjct: 1   MKIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTME 60

Query: 338 DYNIQKESTLHLV 300
              +  +S + ++
Sbjct: 61  ANKVFDKSVIAII 73


>At3g06455.1 68416.m00747 splicing factor-related contains weak
           similarity to Swiss-Prot:Q12874 splicing factor 3A
           subunit 3 (Spliceosome associated protein 61, SAP 61,
           SF3a60) [Homo sapiens]
          Length = 366

 Score = 40.3 bits (90), Expect = 8e-04
 Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEV-EPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 333
           +Q FV+ L GK++TL    P    E +K +I ++  IP + QRLI  G Q+     +S  
Sbjct: 9   LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66

Query: 332 NIQKESTLHLV 300
             Q ++T++LV
Sbjct: 67  --QSDTTMNLV 75


>At4g03360.1 68417.m00458 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 284

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 20/69 (28%), Positives = 39/69 (56%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           +++ ++  +G + T++V   DT+  +K KI+  +G P ++Q LIF  K L+D   +    
Sbjct: 2   IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61

Query: 329 IQKESTLHL 303
           I+  S + L
Sbjct: 62  IRHNSRILL 70


>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
           family protein / ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain, Pfam profile
           PF00454:  Phosphatidylinositol 3- and 4-kinase
          Length = 574

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
 Frame = -1

Query: 503 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKE---GIPPNQQRLIFAGKQLEDGRTLSDY 333
           I V+T+ GK   L VE S  +  VK +I  KE   GIP + + L   G++L+D R ++D 
Sbjct: 111 ISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDL 169

Query: 332 NIQKESTLHLV 300
               ++ +HL+
Sbjct: 170 CQNGDNVIHLL 180


>At4g02950.1 68417.m00402 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 318

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 20/69 (28%), Positives = 38/69 (55%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 330
           + + ++  +G + T++V   DT+  +K KI+  +G P ++Q LIF  K L+D   +    
Sbjct: 36  ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95

Query: 329 IQKESTLHL 303
           I+  S + L
Sbjct: 96  IRHNSRILL 104


>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
           to polyubiquitin GI:166336 from (Aglaothamnion
           neglectum)
          Length = 91

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 22/49 (44%), Positives = 28/49 (57%)
 Frame = -1

Query: 542 LWYGDSVRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 396
           L  G   +   M IFV TL GKT  LEV+ S+ I+ VK  I D+  +PP
Sbjct: 38  LGLGQGPQGEMMSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84



 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVK 429
           M+I +KT  GKTI LE+E S    ++K
Sbjct: 1   MKILIKTEKGKTINLELEDSSETIDIK 27


>At4g05250.1 68417.m00793 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 318

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 19/52 (36%), Positives = 31/52 (59%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 354
           M +F +T +G    +E+   DT+  +K KI+  + IP ++Q LIF G  L+D
Sbjct: 1   MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52


>At4g05310.1 68417.m00809 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 415

 Score = 37.1 bits (82), Expect = 0.008
 Identities = 18/47 (38%), Positives = 29/47 (61%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 369
           M+  V+ L G +  +EVE +DT+  VK KI+  + +P ++Q LI  G
Sbjct: 1   MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47


>At4g05270.1 68417.m00797 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 129

 Score = 37.1 bits (82), Expect = 0.008
 Identities = 19/47 (40%), Positives = 28/47 (59%)
 Frame = -1

Query: 509 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 369
           M+  V+ L G +  LEV+  DT+  VK KI+  + IP ++Q LI  G
Sbjct: 1   MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47


>At5g14360.1 68418.m01678 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 163

 Score = 34.7 bits (76), Expect = 0.042
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -1

Query: 467 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 354
           L +E + T   +K  +    G+ P QQRL+F GK+ ED
Sbjct: 83  LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120


>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
           family protein similar to phosphatidylinositol 4-kinase
           type-II beta [Homo sapiens] GI:20159767; contains Pfam
           profile PF00454: Phosphatidylinositol 3- and 4-kinase
          Length = 630

 Score = 34.3 bits (75), Expect = 0.055
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = -1

Query: 512 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 345
           + ++FV+T TG  + LE++ SD    VK K+Q     P  +  L F    L++  T
Sbjct: 40  RRRVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95


>At1g11970.1 68414.m01383 hypothetical protein
          Length = 99

 Score = 33.5 bits (73), Expect = 0.096
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = -1

Query: 518 RVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 399
           R + ++  + L+ K I +E++P D IE +K  I+++ GIP
Sbjct: 40  RQRFKVKSQFLSEKKIDIEIDPMDKIEQIKEGIEEEIGIP 79


>At5g40630.1 68418.m04932 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 165

 Score = 33.1 bits (72), Expect = 0.13
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = -1

Query: 530 DSVRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 354
           DS     + + V T++  +  + ++ + T   +K  I    GI   +QRL+F GK+ ED
Sbjct: 72  DSNTEDLISLRVSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130


>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
           domain-containing protein low similarity to NUB1
           (NEDD8-interacting protein) [Homo sapiens] GI:13383476;
           contains Pfam profile PF00627: UBA/TS-N domain
          Length = 562

 Score = 31.5 bits (68), Expect = 0.39
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
 Frame = -1

Query: 467 LEVEPSD-TIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG----RTLSDYNIQKESTL 309
           LEVE  + T+  ++ ++  + G+ P   +LIFAGK L+D      TLS   I++ S +
Sbjct: 14  LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71


>At1g64470.1 68414.m07309 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 213

 Score = 31.5 bits (68), Expect = 0.39
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
 Frame = -1

Query: 503 IFVKTLTGKTITLEVEPSDTIENVKAKI-QDKEGIPP-NQQRLIFAGKQLEDGRTLSDYN 330
           + V T  GK     V+    +  +K +I ++ +G P  + Q ++F G++L+D R +    
Sbjct: 113 VTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGIC 172

Query: 329 IQKESTLHLV 300
               S +HL+
Sbjct: 173 KDGNSVIHLL 182


>At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal,
           putative / glycolate oxidase, putative / short chain
           alpha-hydroxy acid oxidase, putative similar to Chain A,
           Glycolate Oxidase (E.C.1.1.3.15) Mutant With Tyr 24
           Replaced By Phe (Y24f) gi|999542
          Length = 363

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = +3

Query: 300 HQVEGGF--LLDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 419
           H V+G    LLD  VR GT +F+ L+   Q +LIGR  ++ L
Sbjct: 272 HAVKGRIPVLLDGGVRRGTDVFKALALGAQAVLIGRPIVYGL 313


>At1g22050.1 68414.m02758 ubiquitin family protein contains
           INTERPRO:IPR000626 ubiquitin domain
          Length = 119

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 7/46 (15%)
 Frame = -1

Query: 452 SDTIENVKAKI-----QDKEGIPP--NQQRLIFAGKQLEDGRTLSD 336
           S T+ ++K K+     +DKE  P   N  +LI AGK LE+ RTL++
Sbjct: 28  SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAE 73


>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
           domain-containing protein / ubiquitin family protein
           similar to SP|Q15459 Splicing factor 3 subunit 1
           (Spliceosome associated protein 114) {Homo sapiens};
           contains Pfam profiles PF00240: Ubiquitin family,
           PF01805: Surp module
          Length = 785

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = -1

Query: 452 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 327
           S+ + ++K KI  +  IP N+Q+L      L+D  +L+ YN+
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNV 767


>At5g12280.1 68418.m01444 hypothetical protein
          Length = 419

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -1

Query: 479 KTITLEVEP-SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 327
           K + + V+  S+ + ++K KI  +   P N+Q+L      L+D  +L+ YN+
Sbjct: 357 KVVKITVQSLSENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNV 408


>At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal,
           putative / glycolate oxidase, putative / short chain
           alpha-hydroxy acid oxidase, putative similar to
           (S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
           oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
           [Spinacia oleracea] SWISS-PROT:P05414
          Length = 363

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 321 LLDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 419
           LLD  VR GT +F+ L+   Q +LIGR  ++ L
Sbjct: 281 LLDGGVRRGTDVFKALALGAQAVLIGRPIIYGL 313


>At1g47680.1 68414.m05297 hypothetical protein
          Length = 104

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -1

Query: 458 EPSDTIENVKAKIQDKEG-IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 303
           E  D +E++  K  ++ G +     +L  +G+Q+   R L DY +Q E+T  L
Sbjct: 31  EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83


>At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal,
           putative / glycolate oxidase, putative / short chain
           alpha-hydroxy acid oxidase, putative similar to
           (S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
           oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
           [Spinacia oleracea] SWISS-PROT:P05414
          Length = 368

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 324 LDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 419
           LD  VR GT +F+ L+     + +GR SLF L
Sbjct: 284 LDGGVRRGTDVFKALALGASGVFVGRPSLFSL 315


>At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming]
           beta-chain, mitochondrial, putative / succinyl-CoA
           synthetase, beta chain, putative / SCS-beta, putative
           identical to SP|O82662 Succinyl-CoA ligase [GDP-forming]
           beta-chain, mitochondrial precursor (EC 6.2.1.4)
           (Succinyl-CoA synthetase, beta chain) (SCS- beta)
           {Arabidopsis thaliana}; similar to SP|O97580
           Succinyl-CoA ligase [ADP-forming] beta-chain,
           mitochondrial precursor (EC 6.2.1.5) {Sus scrofa};
           contains Pfam profiles PF00549: CoA-ligase, PF02222:
           ATP-grasp domain
          Length = 421

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = -1

Query: 452 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 300
           + ++E VK  IQD   + PN+  L+   + L  GR L  +    +  +H+V
Sbjct: 51  ASSLEEVKKAIQD---VFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIV 98


>At1g78020.1 68414.m09092 senescence-associated protein-related
           similar to senescence-associated protein SAG102
           (GI:22331931) [Arabidopsis thaliana]
          Length = 162

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -2

Query: 412 KRESLPINRG*SLLESSWKMDVPSRTTISRRNPPS 308
           KR+  PINR  SL E  + +++PS +  S +  P+
Sbjct: 5   KRQRPPINRTTSLSEIKFDLNLPSESEPSNQQKPT 39


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,449,364
Number of Sequences: 28952
Number of extensions: 219836
Number of successful extensions: 769
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1043173136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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