Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_F22
         (655 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g11090.1 68414.m01270 hydrolase, alpha/beta fold family prote...    32   0.38 
At5g13970.1 68418.m01633 expressed protein                             29   2.7  
At4g00740.1 68417.m00101 dehydration-responsive protein-related ...    29   3.6  
At4g02500.1 68417.m00341 galactosyl transferase GMA12/MNN10 fami...    28   6.2  
At2g04680.1 68415.m00478 DC1 domain-containing protein contains ...    28   6.2  
At4g08620.1 68417.m01419 sulfate transporter identical to sulfat...    27   8.2  

>At1g11090.1 68414.m01270 hydrolase, alpha/beta fold family protein
           similar to monoglyceride lipase from [Homo sapiens]
           GI:14594904, [Mus musculus] GI:2632162; contains Pfam
           profile PF00561: hydrolase, alpha/beta fold family
          Length = 324

 Score = 31.9 bits (69), Expect = 0.38
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +3

Query: 60  VFLVFVFARYVASDGDALLKP-CKLGDMQCLSSATEQFLEKTSKGIPQYDIWPIDPLVVT 236
           + L+  FA  +  DG  L+ P CK+ D        +QFL   S+ +P + I P + L+  
Sbjct: 144 ICLLIQFADPLGFDGAVLVAPMCKISDKVRPKWPVDQFLIMISRFLPTWAIVPTEDLLEK 203

Query: 237 SLDV 248
           S+ V
Sbjct: 204 SIKV 207


>At5g13970.1 68418.m01633 expressed protein
          Length = 404

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/84 (19%), Positives = 40/84 (47%)
 Frame = +3

Query: 381 LHIVGDIVIELTEQSKSFTGLYTADTNVIGAVRYGYNLKNDDNGVQHFEVQPETFTCESI 560
           LH+  ++   L+  +++      ++ N++GA +  +   +D+NG++    + E    +S 
Sbjct: 177 LHVSEELQDNLSMSTENEKPFVVSEDNLLGAFKESHVGSSDENGLKPILKRRENQADDSK 236

Query: 561 GEPXITLSSDLSSALEKDSGNNSL 632
               +  SSD+      +  N+S+
Sbjct: 237 SPKRVRFSSDVKDRTLTEGDNDSV 260


>At4g00740.1 68417.m00101 dehydration-responsive protein-related
           similar to early-responsive to dehydration stress ERD3
           protein [Arabidopsis thaliana] GI:15320410; contains
           Pfam profile PF03141: Putative methyltransferase
          Length = 600

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = +3

Query: 33  RDIKMASLKVFLVFVFARYVASDGDALLKPCKLGDMQCLSSATEQFLEKTSKGIPQYDIW 212
           +D + A L+     +    +A DG+ ++    +GD  CL S  E  LE   + +P  D W
Sbjct: 312 QDKEWADLQAVARALCYELIAVDGNTVIWKKPVGD-SCLPSQNEFGLELCDESVPPSDAW 370


>At4g02500.1 68417.m00341 galactosyl transferase GMA12/MNN10 family
           protein low similarity to
           alpha-1,2-galactosyltransferase, Schizosaccharomyces
           pombe [SP|Q09174]
          Length = 461

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 37  TSKWLL*KYSWFLCLLDTWLPM 102
           T  +LL    W L LLDTW PM
Sbjct: 270 TGSFLLRNNQWALDLLDTWAPM 291


>At2g04680.1 68415.m00478 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 657

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/53 (26%), Positives = 26/53 (49%)
 Frame = +3

Query: 399 IVIELTEQSKSFTGLYTADTNVIGAVRYGYNLKNDDNGVQHFEVQPETFTCES 557
           I +E  ++ +        D N I    + +NL+ +++G  H  +QPE   CE+
Sbjct: 352 IELEGMQEEEEIAPYEMIDANTIKHFSHDHNLQINNDG--HGRIQPENIVCEA 402


>At4g08620.1 68417.m01419 sulfate transporter identical to sulfate
           transporter [Arabidopsis thaliana] GI:3777483
          Length = 649

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +3

Query: 246 VIAPSDAGIVIRFKNL-NITGLKNQQISDFQMDTKAKTVLLXTKADLHIVG 395
           V+AP  AG++   K++   T   +  + DF+  T AK  LL  +A   I+G
Sbjct: 25  VLAPPKAGLLKDIKSVVEETFFHDAPLRDFKGQTPAKKALLGIQAVFPIIG 75


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,599,894
Number of Sequences: 28952
Number of extensions: 310305
Number of successful extensions: 732
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)