Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0052
         (772 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g03220.1 68415.m00275 galactoside 2-alpha-L-fucosyltransferas...    31   0.84 
At3g63330.1 68416.m07125 protein kinase family protein contains ...    29   3.4  
At3g30550.1 68416.m03866 hypothetical protein includes At2g05890...    29   3.4  
At1g27320.1 68414.m03328 histidine kinase (AHK3) identical to hi...    29   3.4  
At1g07000.1 68414.m00745 exocyst subunit EXO70 family protein si...    29   3.4  
At3g26320.1 68416.m03284 cytochrome P450 71B36, putative (CYP71B...    28   7.9  
At1g67490.1 68414.m07686 alpha-glucosidase I (GCS1) / KNOPF (KNF...    28   7.9  

>At2g03220.1 68415.m00275 galactoside 2-alpha-L-fucosyltransferase /
           xyloglucan alpha-(1,2)-fucosyltransferase (FUT1) (FT1)
           identical to SP|Q9SWH5 Galactoside
           2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan
           alpha-(1,2)-fucosyltransferase) (AtFUT1) {Arabidopsis
           thaliana}
          Length = 558

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +3

Query: 141 IIADYDSAVERSKLIYTD-NKGELITNVVNNLIRNNKMNAWSTPTSSG 281
           ++ + D+ VERS+ + T  +K  L+T++      N K   W  PTS+G
Sbjct: 391 LLPEVDTLVERSRHVNTPKHKAVLVTSLNAGYAENLKSMYWEYPTSTG 438


>At3g63330.1 68416.m07125 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 376

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
 Frame = +3

Query: 120 EHLYNDVIIADYDSAVERSKLIYTDNKGELITNVV-----NNLIRNNKMNAWSTPTSSG 281
           E  YND+ +  +   V  SKL+YT  + E+ +          ++R +K   W   T SG
Sbjct: 65  ESRYNDIWLVFHHEGVSLSKLMYTVEEAEISSEKAEEASHGQILRPSKWWTWLKTTESG 123


>At3g30550.1 68416.m03866 hypothetical protein includes At2g05890,
           At4g07450, At3g30630, At3g43100, At2g09960, At3g30550,
           At1g39430, At2g10460, At4g03640, At5g35250
          Length = 509

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 17/82 (20%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
 Frame = +3

Query: 33  KMKSAVVVLCLFAASLYAD-EGTAFNEILAEHLYNDVIIADYDSAVERSKLIYTDNKGEL 209
           K K+   +LC+   +++   +      +  +++ ++++  DYD+ V+ S LI  +    +
Sbjct: 398 KGKTFQFLLCVQRENIFGGYDSFTVARVYTDNIADEIVQEDYDAYVDPSSLISIEQDSLM 457

Query: 210 ITNVVNNLIRNNKMNAWSTPTS 275
           +TN V+  + +  +++  TP+S
Sbjct: 458 LTNGVD--LSDVDLSSTFTPSS 477


>At1g27320.1 68414.m03328 histidine kinase (AHK3) identical to
           histidine kinase AHK3 [Arabidopsis thaliana]
           gi|13537198|dbj|BAB40775
          Length = 1036

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +3

Query: 156 DSAVERSKLIYTDNKGELITNVVNNLIRNNKMNAWSTPTSSGCKAPRTS 302
           D+ +E    +   + G+L    +  L + NKM  W+  +SSG K P  S
Sbjct: 30  DNGIEDKSGLLVGSVGDLEKTKMTTLKKKNKMWFWNKISSSGLKIPSFS 78


>At1g07000.1 68414.m00745 exocyst subunit EXO70 family protein
           similar to leucine zipper protein GI:10177020 from
           [Arabidopsis thaliana] contains Pfam domain PF03081:
           Exo70 exocyst complex subunit;
          Length = 599

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -3

Query: 137 VIVKMLRQDFVEGCAFVGVQRRREETQDNNSGLHLR 30
           + V+M+   F + C+ V   RRRE  +++ S LHLR
Sbjct: 192 IAVRMVAGGFAKECSRVYSSRRREFLEESLSRLHLR 227


>At3g26320.1 68416.m03284 cytochrome P450 71B36, putative (CYP71B36)
           identical to Cytochrome P450 71B36 (SP:Q9LIP4)
           [Arabidopsis thaliana]; contains Pfam profile: PF00067
           cytochrome P450
          Length = 500

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 748 RLYPPRPMRLPKAVHRSFEQRXKPMFVVPVK 656
           RL+PP P  +P+ V   FE      +V+PVK
Sbjct: 361 RLHPPSPFLIPRQVMSEFELND---YVIPVK 388


>At1g67490.1 68414.m07686 alpha-glucosidase I (GCS1) / KNOPF (KNF)
           identical to alpha-glucosidase I (GI:16506680,
           GI:13398928) [Arabidopsis thaliana]
          Length = 852

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +3

Query: 168 ERSKLIYTDNKGELITNVVNN 230
           E+SK IYT+ +  LI NVV N
Sbjct: 790 EKSKAIYTELRSNLIRNVVRN 810


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,973,149
Number of Sequences: 28952
Number of extensions: 316124
Number of successful extensions: 804
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1716774400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)