Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20093
         (590 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g62250.2 68414.m07023 expressed protein                             30   1.0  
At1g62250.1 68414.m07022 expressed protein                             30   1.0  
At5g09400.1 68418.m01089 potassium transporter family protein si...    29   2.3  
At1g77240.1 68414.m08996 AMP-binding protein, putative strong si...    29   2.3  
At4g13290.1 68417.m02078 cytochrome P450 71A19, putative (CYP71A...    29   3.1  
At1g56660.1 68414.m06516 expressed protein                             28   5.4  
At5g51650.1 68418.m06404 hypothetical protein                          27   7.1  
At3g63200.1 68416.m07100 patatin-related low similarity to patat...    27   9.4  
At1g47310.1 68414.m05238 expressed protein                             27   9.4  

>At1g62250.2 68414.m07023 expressed protein
          Length = 223

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +3

Query: 33  LCLPSSSPCVRWLLTPHLHQELMTYWRSSCI*VSSLVNTRPLS 161
           LC P  +  +RW  TP +  E+++ WR  C  +++    R ++
Sbjct: 181 LCTPQPT-VIRWSSTPSVSDEILSKWRGFCAVIANAYYIRGMA 222


>At1g62250.1 68414.m07022 expressed protein
          Length = 267

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +3

Query: 33  LCLPSSSPCVRWLLTPHLHQELMTYWRSSCI*VSSLVNTRPLS 161
           LC P  +  +RW  TP +  E+++ WR  C  +++    R ++
Sbjct: 181 LCTPQPT-VIRWSSTPSVSDEILSKWRGFCAVIANAYYIRGMA 222


>At5g09400.1 68418.m01089 potassium transporter family protein
           similar to K+ transporter HAK5 [Arabidopsis thaliana]
           GI:7108597; contains Pfam profile PF02705: K+ potassium
           transporter; KUP/HAK/KT Transporter family member,
           PMID:11500563; Note: possible sequencing error causes a
           frameshift in the 4th exon|15810448|gb|AY056263
          Length = 858

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 19/73 (26%), Positives = 35/73 (47%)
 Frame = -3

Query: 219 FTASLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKA 40
           F +S+  S F+   +  ++A  ++   MTT  +SC    S+ LG    L+   HT+R   
Sbjct: 411 FFSSVPGSAFWPVLFIANIAALIASRTMTTATFSC-IKQSTALGCFPRLKI-IHTSRKFM 468

Query: 39  NKVSLILAQWLSL 1
            ++ + +  W  L
Sbjct: 469 GQIYIPVLNWFLL 481


>At1g77240.1 68414.m08996 AMP-binding protein, putative strong
           similarity to AMP-binding protein GI:1903034 from
           [Brassica napus]; contains Pfam AMP-binding domain
           PF00501
          Length = 545

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +1

Query: 295 VKSYFPIQFRVIFTEQTVKLINKR-DHHALKLIDQQNHNKIAFGDSKDKTSKKVSWKFTP 471
           V S + +QF V  +   +  IN R D HAL ++ + + +K+ F D    +    +  F P
Sbjct: 76  VPSVYELQFAVPMSGAVLNNINPRLDAHALSVLLRHSESKLVFVDHHSSSLVLEAVSFLP 135

Query: 472 VLENNRV 492
             E  R+
Sbjct: 136 KDERPRL 142


>At4g13290.1 68417.m02078 cytochrome P450 71A19, putative (CYP71A19)
           Identical to Cytochrome P450 (SP:Q9T0K0) [Arabidopsis
           thaliana]; similar to cytochrome P450LXXIA1, Persea
           americana, M32885
          Length = 490

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -3

Query: 378 GVMVPFVYELDSLLGEDHSKLDGEVRFDDFL 286
           G  +P +  +D + G+DH   + + RFD+FL
Sbjct: 221 GEYIPSLSWIDKIRGQDHKMEEVDKRFDEFL 251


>At1g56660.1 68414.m06516 expressed protein
          Length = 522

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +1

Query: 181 EGKEGRGYQGSREASDRKRQEEHHGFAYQLWTKDGKE 291
           +GK+ +G +G  E  D ++++EH     ++  KD K+
Sbjct: 213 KGKKEKGEKGDLEKEDEEKKKEHDETDQEMKEKDSKK 249


>At5g51650.1 68418.m06404 hypothetical protein 
          Length = 206

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +1

Query: 175 ISEGKEGRGYQGSREASDRKRQEEHHGFAYQLWTKDGKEIVKSYFPI 315
           + E KEG   QG  E  ++   E+    A+  W KDG   V   + I
Sbjct: 38  VQERKEGLEAQGKEEGVEKVLVEKEKEEAHVSWEKDGSVSVAYTYAI 84


>At3g63200.1 68416.m07100 patatin-related low similarity to
           patatin-like latex protein allergen Hev b 7 - Hevea
           brasiliensis, EMBL:AF113546; contains patatin domain
           PF01734
          Length = 384

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 149 ETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMASP 262
           ETA       L E  GE I+  V+RL+ +GK +   SP
Sbjct: 334 ETAPFGVKRILTESNGERIEGFVQRLVASGKSSLPPSP 371


>At1g47310.1 68414.m05238 expressed protein
          Length = 395

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 17/57 (29%), Positives = 31/57 (54%)
 Frame = +1

Query: 334 TEQTVKLINKRDHHALKLIDQQNHNKIAFGDSKDKTSKKVSWKFTPVLENNRVYFKI 504
           T QTV  +  +   A  ++  Q   + + G ++   SKKV+W+  P +E  RV+F++
Sbjct: 286 TRQTVSSVTAK-LKASGMVRFQLEIERSIGKNESVISKKVAWRTKPKIE--RVWFEV 339


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,222,592
Number of Sequences: 28952
Number of extensions: 281662
Number of successful extensions: 1031
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1171109464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)